RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 HAX1O00165 279 aa19.79■□□□□ 0.76
CHD1-205ENST00000508756 PAK3O75914 559 aaPredicted RBP19.78■□□□□ 0.76
CHD1-205ENST00000508756 ZRANB1Q9UGI0 708 aa19.75■□□□□ 0.75
CHD1-205ENST00000508756 CCDC61Q9Y6R9 512 aa19.72■□□□□ 0.75
CHD1-205ENST00000508756 ECM2O94769 699 aaPredicted RBP19.71■□□□□ 0.75
CHD1-205ENST00000508756 EVX2Q03828 476 aa19.68■□□□□ 0.74
CHD1-205ENST00000508756 PYGBP11216 843 aa19.67■□□□□ 0.74
CHD1-205ENST00000508756 TRIM41Q8WV44 630 aa19.65■□□□□ 0.74
CHD1-205ENST00000508756 PHF12Q96QT6 1004 aa19.62■□□□□ 0.73
CHD1-205ENST00000508756 ZNF579Q8NAF0 562 aaKnown RBP19.58■□□□□ 0.72
CHD1-205ENST00000508756 CHRM1P11229 460 aaPredicted RBP19.57■□□□□ 0.72
CHD1-205ENST00000508756 RGL2O15211 777 aa19.55■□□□□ 0.72
CHD1-205ENST00000508756 KIF12Q96FN5 646 aa19.52■□□□□ 0.72
CHD1-205ENST00000508756 RNF25Q96BH1 459 aaPredicted RBP19.51■□□□□ 0.71
CHD1-205ENST00000508756 MAP3K13O43283 966 aa19.48■□□□□ 0.71
CHD1-205ENST00000508756 PCDHB13Q9Y5F0 798 aa19.43■□□□□ 0.7
CHD1-205ENST00000508756 DCAF8L2P0C7V8 631 aa19.41■□□□□ 0.7
CHD1-205ENST00000508756 RIOK3O14730 519 aaKnown RBP19.4■□□□□ 0.7
CHD1-205ENST00000508756 PCDHB8Q9UN66 801 aa19.4■□□□□ 0.7
CHD1-205ENST00000508756 IFNL1Q8IU54 200 aa19.38■□□□□ 0.69
CHD1-205ENST00000508756 MS4A3Q96HJ5 214 aa19.37■□□□□ 0.69
CHD1-205ENST00000508756 SGIP1Q9BQI5 828 aa19.36■□□□□ 0.69
CHD1-205ENST00000508756 ZNF467Q7Z7K2 595 aaPredicted RBP19.35■□□□□ 0.69
CHD1-205ENST00000508756 GALR2O43603 387 aaPredicted RBP19.3■□□□□ 0.68
CHD1-205ENST00000508756 VGFO15240 615 aaPredicted RBP19.26■□□□□ 0.67
CHD1-205ENST00000508756 GABBR2O75899 941 aa19.26■□□□□ 0.67
CHD1-205ENST00000508756 SP7Q8TDD2 431 aaPredicted RBP19.25■□□□□ 0.67
CHD1-205ENST00000508756 TRPC6Q9Y210 931 aa19.25■□□□□ 0.67
CHD1-205ENST00000508756 CLCN6P51797 869 aa19.23■□□□□ 0.67
CHD1-205ENST00000508756 PDAP1Q13442 181 aaKnown RBP19.21■□□□□ 0.67
CHD1-205ENST00000508756 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.2■□□□□ 0.66
CHD1-205ENST00000508756 ZFP91Q96JP5 570 aaPredicted RBP19.2■□□□□ 0.66
CHD1-205ENST00000508756 TAOK2Q9UL54 1235 aa19.2■□□□□ 0.66
CHD1-205ENST00000508756 PSEN1P49768 467 aa19.18■□□□□ 0.66
CHD1-205ENST00000508756 CHGAP10645 457 aaKnown RBP19.16■□□□□ 0.66
CHD1-205ENST00000508756 STK25O00506 426 aa19.12■□□□□ 0.65
CHD1-205ENST00000508756 HS6ST3Q8IZP7 471 aa19.09■□□□□ 0.65
CHD1-205ENST00000508756 BCL11BQ9C0K0 894 aaPredicted RBP19.09■□□□□ 0.65
CHD1-205ENST00000508756 TMEM106CQ9BVX2 250 aa19.08■□□□□ 0.64
CHD1-205ENST00000508756 STK24Q9Y6E0 443 aa19.07■□□□□ 0.64
CHD1-205ENST00000508756 TIE1P35590 1138 aa19.06■□□□□ 0.64
CHD1-205ENST00000508756 BMP2KQ9NSY1 1161 aaPredicted RBP19.06■□□□□ 0.64
CHD1-205ENST00000508756 TTLL13PA6NNM8 815 aa19.03■□□□□ 0.64
CHD1-205ENST00000508756 DCBLD2Q96PD2 775 aa18.96■□□□□ 0.63
CHD1-205ENST00000508756 CABP2Q9NPB3 220 aa18.96■□□□□ 0.63
CHD1-205ENST00000508756 ATMINO43313 823 aaPredicted RBP18.95■□□□□ 0.62
CHD1-205ENST00000508756 ATN1P54259 1190 aaPredicted RBP18.94■□□□□ 0.62
CHD1-205ENST00000508756 ASTLQ6HA08 431 aaPredicted RBP18.93■□□□□ 0.62
CHD1-205ENST00000508756 TRIM35Q9UPQ4 493 aa18.91■□□□□ 0.62
CHD1-205ENST00000508756 BBXQ8WY36 941 aaPredicted RBP18.9■□□□□ 0.62
CHD1-205ENST00000508756 POTEIP0CG38 1075 aa18.89■□□□□ 0.61
CHD1-205ENST00000508756 DNAJC5Q9H3Z4 198 aa18.88■□□□□ 0.61
CHD1-205ENST00000508756 NKX1-1Q15270 411 aaPredicted RBP18.87■□□□□ 0.61
CHD1-205ENST00000508756 EFCAB3Q8N7B9 438 aa18.87■□□□□ 0.61
CHD1-205ENST00000508756 GOLGA2Q08379 1002 aa18.85■□□□□ 0.61
CHD1-205ENST00000508756 PELP1Q8IZL8 1130 aaKnown RBP18.84■□□□□ 0.61
CHD1-205ENST00000508756 MKRN3Q13064 507 aaKnown RBP18.78■□□□□ 0.6
CHD1-205ENST00000508756 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.78■□□□□ 0.6
CHD1-205ENST00000508756 MFRPQ9BY79 579 aa18.74■□□□□ 0.59
CHD1-205ENST00000508756 PHF8Q9UPP1 1060 aa18.72■□□□□ 0.59
CHD1-205ENST00000508756 SOX12O15370 315 aa18.71■□□□□ 0.59
CHD1-205ENST00000508756 PAXIP1Q6ZW49 1069 aaPredicted RBP18.69■□□□□ 0.58
CHD1-205ENST00000508756 GTPBP6O43824 516 aaPredicted RBP18.67■□□□□ 0.58
CHD1-205ENST00000508756 IER5LQ5T953 404 aa18.67■□□□□ 0.58
CHD1-205ENST00000508756 FBXO22Q8NEZ5 403 aa18.66■□□□□ 0.58
CHD1-205ENST00000508756 CFAP44Q96MT7 982 aa18.66■□□□□ 0.58
CHD1-205ENST00000508756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.66■□□□□ 0.582e-8■■■□□ 17.1
CHD1-205ENST00000508756 NLRP6P59044 892 aa18.65■□□□□ 0.58
CHD1-205ENST00000508756 SLC39A7Q92504 469 aa18.65■□□□□ 0.58
CHD1-205ENST00000508756 SPRYD3Q8NCJ5 442 aa18.64■□□□□ 0.57
CHD1-205ENST00000508756 IRX5P78411 483 aaPredicted RBP18.63■□□□□ 0.57
CHD1-205ENST00000508756 PLCB2Q00722 1185 aa18.62■□□□□ 0.57
CHD1-205ENST00000508756 METRNQ9UJH8 293 aa18.62■□□□□ 0.57
CHD1-205ENST00000508756 MS4A4AQ96JQ5 239 aa18.61■□□□□ 0.57
CHD1-205ENST00000508756 C7P10643 843 aa18.6■□□□□ 0.57
CHD1-205ENST00000508756 ILDR1Q86SU0 546 aaPredicted RBP18.6■□□□□ 0.57
CHD1-205ENST00000508756 COLQQ9Y215 455 aaPredicted RBP18.59■□□□□ 0.57
CHD1-205ENST00000508756 PDCD7Q8N8D1 485 aaKnown RBP18.57■□□□□ 0.56
CHD1-205ENST00000508756 RYDENQ9NUL5 291 aaKnown RBP18.57■□□□□ 0.56
CHD1-205ENST00000508756 SEC24BO95487 1268 aa18.56■□□□□ 0.56
CHD1-205ENST00000508756 OCEL1Q9H607 264 aa18.56■□□□□ 0.56
CHD1-205ENST00000508756 POTEFA5A3E0 1075 aa18.55■□□□□ 0.56
CHD1-205ENST00000508756 PLCG2P16885 1265 aa18.55■□□□□ 0.56
CHD1-205ENST00000508756 DPY19L2Q6NUT2 758 aa18.52■□□□□ 0.56
CHD1-205ENST00000508756 PPP1R37O75864 691 aa18.51■□□□□ 0.55
CHD1-205ENST00000508756 HAP1P54257 671 aaPredicted RBP18.37■□□□□ 0.53
CHD1-205ENST00000508756 TSHZ2Q9NRE2 1034 aa18.35■□□□□ 0.53
CHD1-205ENST00000508756 BOLA1Q9Y3E2 137 aa18.32■□□□□ 0.52
CHD1-205ENST00000508756 MICALL2Q8IY33 904 aa18.31■□□□□ 0.52
CHD1-205ENST00000508756 L3MBTL3Q96JM7 780 aaPredicted RBP18.31■□□□□ 0.52
CHD1-205ENST00000508756 POTEB2H3BUK9 544 aa18.3■□□□□ 0.52
CHD1-205ENST00000508756 G3V3G9 751 aa18.27■□□□□ 0.52
CHD1-205ENST00000508756 POTEJP0CG39 1038 aa18.25■□□□□ 0.51
CHD1-205ENST00000508756 CADPS2Q86UW7 1296 aa18.25■□□□□ 0.51
CHD1-205ENST00000508756 TMEM121BQ9BXQ6 578 aaPredicted RBP18.25■□□□□ 0.51
CHD1-205ENST00000508756 SLC24A1O60721 1099 aa18.2■□□□□ 0.5
CHD1-205ENST00000508756 C3orf67Q6ZVT6 689 aa18.14■□□□□ 0.49
CHD1-205ENST00000508756 NCKAP5LQ9HCH0 1330 aa18.08■□□□□ 0.49
CHD1-205ENST00000508756 LHX8Q68G74 356 aa18.08■□□□□ 0.48
CHD1-205ENST00000508756 TMEM92Q6UXU6 159 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms