RNA–Protein interactions for RNA: ENST00000508580.1

DDX4-208, Transcript of DEAD-box helicase 4, humanhuman

TSL 2

Gene DDX4, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-208ENST00000508580 CCDC61Q9Y6R9 512 aa11.5□□□□□ -0.57
DDX4-208ENST00000508580 GALR2O43603 387 aaPredicted RBP11.48□□□□□ -0.57
DDX4-208ENST00000508580 IFNLR1Q8IU57 520 aaPredicted RBP11.48□□□□□ -0.57
DDX4-208ENST00000508580 POTEIP0CG38 1075 aa11.46□□□□□ -0.57
DDX4-208ENST00000508580 KIF12Q96FN5 646 aa11.42□□□□□ -0.58
DDX4-208ENST00000508580 DCAF8Q5TAQ9 597 aa11.41□□□□□ -0.58
DDX4-208ENST00000508580 MAP3K13O43283 966 aa11.39□□□□□ -0.59
DDX4-208ENST00000508580 MS4A3Q96HJ5 214 aa11.39□□□□□ -0.59
DDX4-208ENST00000508580 DCBLD2Q96PD2 775 aa11.38□□□□□ -0.59
DDX4-208ENST00000508580 FAM212AQ96EL1 285 aa11.37□□□□□ -0.59
DDX4-208ENST00000508580 SPOCK2Q92563 424 aa11.34□□□□□ -0.59
DDX4-208ENST00000508580 PYGBP11216 843 aa11.3□□□□□ -0.6
DDX4-208ENST00000508580 TRPC6Q9Y210 931 aa11.3□□□□□ -0.6
DDX4-208ENST00000508580 PELP1Q8IZL8 1130 aaKnown RBP11.28□□□□□ -0.6
DDX4-208ENST00000508580 PCDHB13Q9Y5F0 798 aa11.28□□□□□ -0.6
DDX4-208ENST00000508580 GSE1Q14687 1217 aa11.27□□□□□ -0.61
DDX4-208ENST00000508580 ATMINO43313 823 aaPredicted RBP11.25□□□□□ -0.61
DDX4-208ENST00000508580 IFNL1Q8IU54 200 aa11.25□□□□□ -0.61
DDX4-208ENST00000508580 SGIP1Q9BQI5 828 aa11.25□□□□□ -0.61
DDX4-208ENST00000508580 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
DDX4-208ENST00000508580 ASTLQ6HA08 431 aaPredicted RBP11.23□□□□□ -0.61
DDX4-208ENST00000508580 BMP2KQ9NSY1 1161 aaPredicted RBP11.21□□□□□ -0.61
DDX4-208ENST00000508580 CHRM1P11229 460 aaPredicted RBP11.2□□□□□ -0.62
DDX4-208ENST00000508580 ATN1P54259 1190 aaPredicted RBP11.2□□□□□ -0.62
DDX4-208ENST00000508580 PCDHB8Q9UN66 801 aa11.2□□□□□ -0.62
DDX4-208ENST00000508580 TIE1P35590 1138 aa11.17□□□□□ -0.62
DDX4-208ENST00000508580 LHX8Q68G74 356 aa11.17□□□□□ -0.62
DDX4-208ENST00000508580 TTLL13PA6NNM8 815 aa11.15□□□□□ -0.62
DDX4-208ENST00000508580 POTEB2H3BUK9 544 aa11.11□□□□□ -0.63
DDX4-208ENST00000508580 TMEM106CQ9BVX2 250 aa11.11□□□□□ -0.63
DDX4-208ENST00000508580 C7P10643 843 aa11.1□□□□□ -0.63
DDX4-208ENST00000508580 SLC39A7Q92504 469 aa11.09□□□□□ -0.63
DDX4-208ENST00000508580 METRNQ9UJH8 293 aa11.09□□□□□ -0.63
DDX4-208ENST00000508580 ZNF467Q7Z7K2 595 aaPredicted RBP11.07□□□□□ -0.64
DDX4-208ENST00000508580 TRIM35Q9UPQ4 493 aa11.07□□□□□ -0.64
DDX4-208ENST00000508580 POTEFA5A3E0 1075 aa11.05□□□□□ -0.64
DDX4-208ENST00000508580 COLQQ9Y215 455 aaPredicted RBP11.02□□□□□ -0.65
DDX4-208ENST00000508580 POTEJP0CG39 1038 aa11.01□□□□□ -0.65
DDX4-208ENST00000508580 PSEN1P49768 467 aa11.01□□□□□ -0.65
DDX4-208ENST00000508580 TRIM41Q8WV44 630 aa11.01□□□□□ -0.65
DDX4-208ENST00000508580 SEC24BO95487 1268 aa10.97□□□□□ -0.65
DDX4-208ENST00000508580 PKD2Q13563 968 aa10.97□□□□□ -0.65
DDX4-208ENST00000508580 RNF25Q96BH1 459 aaPredicted RBP10.97□□□□□ -0.65
DDX4-208ENST00000508580 PDAP1Q13442 181 aaKnown RBP10.96□□□□□ -0.65
DDX4-208ENST00000508580 IER5LQ5T953 404 aa10.96□□□□□ -0.65
DDX4-208ENST00000508580 OTUD5Q96G74 571 aa10.96□□□□□ -0.65
DDX4-208ENST00000508580 IRX5P78411 483 aaPredicted RBP10.92□□□□□ -0.66
DDX4-208ENST00000508580 RIOK3O14730 519 aaKnown RBP10.91□□□□□ -0.66
DDX4-208ENST00000508580 ECM2O94769 699 aaPredicted RBP10.9□□□□□ -0.66
DDX4-208ENST00000508580 GOLGA2Q08379 1002 aa10.88□□□□□ -0.67
DDX4-208ENST00000508580 OCEL1Q9H607 264 aa10.88□□□□□ -0.67
DDX4-208ENST00000508580 CABP2Q9NPB3 220 aa10.88□□□□□ -0.67
DDX4-208ENST00000508580 MKRN3Q13064 507 aaKnown RBP10.87□□□□□ -0.67
DDX4-208ENST00000508580 PLCG2P16885 1265 aa10.86□□□□□ -0.67
DDX4-208ENST00000508580 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.85□□□□□ -0.67
DDX4-208ENST00000508580 ZFP91Q96JP5 570 aaPredicted RBP10.85□□□□□ -0.67
DDX4-208ENST00000508580 RGL2O15211 777 aa10.84□□□□□ -0.67
DDX4-208ENST00000508580 VGFO15240 615 aaPredicted RBP10.84□□□□□ -0.67
DDX4-208ENST00000508580 MAMSTRQ6ZN01 415 aa10.82□□□□□ -0.68
DDX4-208ENST00000508580 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.82□□□□□ -0.68
DDX4-208ENST00000508580 EFCAB3Q8N7B9 438 aa10.81□□□□□ -0.68
DDX4-208ENST00000508580 PDCD7Q8N8D1 485 aaKnown RBP10.81□□□□□ -0.68
DDX4-208ENST00000508580 DPY19L2Q6NUT2 758 aa10.8□□□□□ -0.68
DDX4-208ENST00000508580 ILDR1Q86SU0 546 aaPredicted RBP10.79□□□□□ -0.68
DDX4-208ENST00000508580 SCUBE2Q9NQ36 999 aa10.77□□□□□ -0.69
DDX4-208ENST00000508580 BCL11BQ9C0K0 894 aaPredicted RBP10.74□□□□□ -0.69
DDX4-208ENST00000508580 TAOK2Q9UL54 1235 aa10.74□□□□□ -0.69
DDX4-208ENST00000508580 STK24Q9Y6E0 443 aa10.72□□□□□ -0.69
DDX4-208ENST00000508580 STK25O00506 426 aa10.71□□□□□ -0.69
DDX4-208ENST00000508580 SOX12O15370 315 aa10.7□□□□□ -0.7
DDX4-208ENST00000508580 L3MBTL3Q96JM7 780 aaPredicted RBP10.69□□□□□ -0.7
DDX4-208ENST00000508580 SLAIN1Q8ND83 568 aa10.68□□□□□ -0.7
DDX4-208ENST00000508580 PHF8Q9UPP1 1060 aa10.68□□□□□ -0.7
DDX4-208ENST00000508580 MS4A4AQ96JQ5 239 aa10.66□□□□□ -0.7
DDX4-208ENST00000508580 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.64□□□□□ -0.71
DDX4-208ENST00000508580 BOLA1Q9Y3E2 137 aa10.64□□□□□ -0.71
DDX4-208ENST00000508580 FAM163AQ96GL9 167 aaPredicted RBP10.63□□□□□ -0.71
DDX4-208ENST00000508580 MFRPQ9BY79 579 aa10.62□□□□□ -0.71
DDX4-208ENST00000508580 FBXO22Q8NEZ5 403 aa10.61□□□□□ -0.71
DDX4-208ENST00000508580 NLRP6P59044 892 aa10.6□□□□□ -0.71
DDX4-208ENST00000508580 CHGAP10645 457 aaKnown RBP10.59□□□□□ -0.71
DDX4-208ENST00000508580 TMEM121BQ9BXQ6 578 aaPredicted RBP10.59□□□□□ -0.71
DDX4-208ENST00000508580 C3orf67Q6ZVT6 689 aa10.58□□□□□ -0.72
DDX4-208ENST00000508580 G3V3G9 751 aa10.57□□□□□ -0.72
DDX4-208ENST00000508580 LCE2DQ5TA82 110 aaPredicted RBP10.57□□□□□ -0.72
DDX4-208ENST00000508580 HS6ST3Q8IZP7 471 aa10.56□□□□□ -0.72
DDX4-208ENST00000508580 MICALL2Q8IY33 904 aa10.54□□□□□ -0.72
DDX4-208ENST00000508580 PPP1R37O75864 691 aa10.5□□□□□ -0.73
DDX4-208ENST00000508580 TMEM92Q6UXU6 159 aa10.5□□□□□ -0.73
DDX4-208ENST00000508580 ST18O60284 1047 aa10.49□□□□□ -0.73
DDX4-208ENST00000508580 NKX1-1Q15270 411 aaPredicted RBP10.49□□□□□ -0.73
DDX4-208ENST00000508580 POTEMA6NI47 508 aa10.47□□□□□ -0.73
DDX4-208ENST00000508580 DCAF8L2P0C7V8 631 aa10.47□□□□□ -0.73
DDX4-208ENST00000508580 POTEGQ6S5H5 508 aa10.47□□□□□ -0.73
DDX4-208ENST00000508580 RTN4Q9NQC3 1192 aaKnown RBP10.46□□□□□ -0.73
DDX4-208ENST00000508580 SNPHO15079 494 aa10.45□□□□□ -0.74
DDX4-208ENST00000508580 DNAJC5Q9H3Z4 198 aa10.45□□□□□ -0.74
DDX4-208ENST00000508580 AMER1Q5JTC6 1135 aaPredicted RBP10.41□□□□□ -0.74
DDX4-208ENST00000508580 HOXB3P14651 431 aaPredicted RBP10.4□□□□□ -0.74
DDX4-208ENST00000508580 GTPBP6O43824 516 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms