RNA–Protein interactions for RNA: ENST00000508579.5

CAST-222, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-222ENST00000508579 RNF216Q9NWF9 866 aaPredicted RBP11.9□□□□□ -0.5
CAST-222ENST00000508579 ZMYND15Q9H091 742 aa11.89□□□□□ -0.51
CAST-222ENST00000508579 PAXIP1Q6ZW49 1069 aaPredicted RBP11.87□□□□□ -0.51
CAST-222ENST00000508579 SUPT5HO00267 1087 aaKnown RBP11.87□□□□□ -0.51
CAST-222ENST00000508579 DEKP35659 375 aaKnown RBP11.87□□□□□ -0.51
CAST-222ENST00000508579 UBTFP17480 764 aaKnown RBP11.84□□□□□ -0.51
CAST-222ENST00000508579 POLR3GLQ9BT43 218 aa11.83□□□□□ -0.52
CAST-222ENST00000508579 CCDC9Q9Y3X0 531 aaKnown RBP11.82□□□□□ -0.52
CAST-222ENST00000508579 ARID3AQ99856 593 aa11.8□□□□□ -0.52
CAST-222ENST00000508579 VSIG10Q8N0Z9 540 aa11.79□□□□□ -0.52
CAST-222ENST00000508579 PUS7Q96PZ0 661 aaKnown RBP11.79□□□□□ -0.52
CAST-222ENST00000508579 DNAJC5BQ9UF47 199 aa11.77□□□□□ -0.52
CAST-222ENST00000508579 IGSF3O75054 1194 aa11.73□□□□□ -0.53
CAST-222ENST00000508579 TICAM2Q86XR7 235 aa11.73□□□□□ -0.53
CAST-222ENST00000508579 TSHZ2Q9NRE2 1034 aa11.72□□□□□ -0.53
CAST-222ENST00000508579 NCLP19338 710 aaKnown RBP11.69□□□□□ -0.54
CAST-222ENST00000508579 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.69□□□□□ -0.54
CAST-222ENST00000508579 NAP1L2Q9ULW6 460 aaPredicted RBP11.69□□□□□ -0.54
CAST-222ENST00000508579 CLSTN1O94985 981 aa11.69□□□□□ -0.54
CAST-222ENST00000508579 TEX2Q8IWB9 1127 aa11.69□□□□□ -0.54
CAST-222ENST00000508579 YTHDC1Q96MU7 727 aaKnown RBP11.69□□□□□ -0.54
CAST-222ENST00000508579 IPO4Q8TEX9 1081 aaKnown RBP11.68□□□□□ -0.54
CAST-222ENST00000508579 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.67□□□□□ -0.54
CAST-222ENST00000508579 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.67□□□□□ -0.54
CAST-222ENST00000508579 CHRM1P11229 460 aaPredicted RBP11.65□□□□□ -0.54
CAST-222ENST00000508579 PCGF6Q9BYE7 350 aa11.62□□□□□ -0.55
CAST-222ENST00000508579 IRX6P78412 446 aaPredicted RBP11.57□□□□□ -0.56
CAST-222ENST00000508579 NPM1P06748 294 aaKnown RBP eCLIP11.56□□□□□ -0.56
CAST-222ENST00000508579 ZFP91Q96JP5 570 aaPredicted RBP11.56□□□□□ -0.56
CAST-222ENST00000508579 FTSJ3Q8IY81 847 aaKnown RBP11.54□□□□□ -0.56
CAST-222ENST00000508579 PSMD1Q99460 953 aa11.53□□□□□ -0.56
CAST-222ENST00000508579 ARID4BQ4LE39 1312 aaPredicted RBP11.52□□□□□ -0.56
CAST-222ENST00000508579 ZNF592Q92610 1267 aa11.52□□□□□ -0.57
CAST-222ENST00000508579 PTMSP20962 102 aa11.51□□□□□ -0.57
CAST-222ENST00000508579 SLC4A1APQ9BWU0 796 aaKnown RBP11.51□□□□□ -0.57
CAST-222ENST00000508579 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.49□□□□□ -0.579e-7■■■□□ 16.4
CAST-222ENST00000508579 CFAP44Q96MT7 982 aa11.49□□□□□ -0.57
CAST-222ENST00000508579 BRPF3Q9ULD4 1205 aa11.49□□□□□ -0.57
CAST-222ENST00000508579 CNPY4Q8N129 248 aa11.48□□□□□ -0.57
CAST-222ENST00000508579 PLCD4Q9BRC7 762 aa11.48□□□□□ -0.57
CAST-222ENST00000508579 NEFMP07197 916 aa11.47□□□□□ -0.57
CAST-222ENST00000508579 SETQ01105 290 aaPredicted RBP11.47□□□□□ -0.57
CAST-222ENST00000508579 PTMAP06454 111 aaKnown RBP11.46□□□□□ -0.57
CAST-222ENST00000508579 BBXQ8WY36 941 aaPredicted RBP11.46□□□□□ -0.57
CAST-222ENST00000508579 SECISBP2LQ93073 1101 aaKnown RBP11.46□□□□□ -0.57
CAST-222ENST00000508579 GRIPAP1Q4V328 841 aa11.46□□□□□ -0.58
CAST-222ENST00000508579 RTL5Q5HYW3 569 aaPredicted RBP11.46□□□□□ -0.58
CAST-222ENST00000508579 KDM2AQ9Y2K7 1162 aa11.46□□□□□ -0.58
CAST-222ENST00000508579 MCCP23508 829 aa11.45□□□□□ -0.58
CAST-222ENST00000508579 CNGB1Q14028 1251 aaPredicted RBP11.45□□□□□ -0.58
CAST-222ENST00000508579 DCAF1Q9Y4B6 1507 aa11.45□□□□□ -0.58
CAST-222ENST00000508579 CANXP27824 592 aaKnown RBP11.44□□□□□ -0.58
CAST-222ENST00000508579 CHMP4BQ9H444 224 aaKnown RBP11.44□□□□□ -0.58
CAST-222ENST00000508579 RRP9O43818 475 aaKnown RBP11.41□□□□□ -0.58
CAST-222ENST00000508579 FANCIQ9NVI1 1328 aa11.41□□□□□ -0.58
CAST-222ENST00000508579 CC2D2BQ6DHV5 1058 aa11.41□□□□□ -0.58
CAST-222ENST00000508579 VGFO15240 615 aaPredicted RBP11.4□□□□□ -0.58
CAST-222ENST00000508579 ZBTB7CA1YPR0 619 aa11.39□□□□□ -0.59
CAST-222ENST00000508579 CCDC180Q9P1Z9 1646 aa11.39□□□□□ -0.59
CAST-222ENST00000508579 GTF2E1P29083 439 aaPredicted RBP11.37□□□□□ -0.59
CAST-222ENST00000508579 WWC1Q8IX03 1113 aa11.37□□□□□ -0.59
CAST-222ENST00000508579 PRDM10Q9NQV6 1147 aa11.37□□□□□ -0.59
CAST-222ENST00000508579 C11orf95C9JLR9 678 aaPredicted RBP11.36□□□□□ -0.59
CAST-222ENST00000508579 CCER1Q8TC90 406 aaPredicted RBP11.36□□□□□ -0.59
CAST-222ENST00000508579 NPM3O75607 178 aaKnown RBP11.33□□□□□ -0.59
CAST-222ENST00000508579 CLGNO14967 610 aa11.33□□□□□ -0.6
CAST-222ENST00000508579 TMED8Q6PL24 325 aaPredicted RBP11.33□□□□□ -0.6
CAST-222ENST00000508579 CERS3Q8IU89 383 aa11.33□□□□□ -0.6
CAST-222ENST00000508579 IL27Q8NEV9 243 aa11.33□□□□□ -0.6
CAST-222ENST00000508579 CALD1Q05682 793 aaKnown RBP11.32□□□□□ -0.6
CAST-222ENST00000508579 SUPT16HQ9Y5B9 1047 aaKnown RBP11.32□□□□□ -0.6
CAST-222ENST00000508579 STAC3Q96MF2 364 aa11.31□□□□□ -0.6
CAST-222ENST00000508579 RBM19Q9Y4C8 960 aaKnown RBP11.31□□□□□ -0.6
CAST-222ENST00000508579 FBLN2P98095 1184 aa11.28□□□□□ -0.6
CAST-222ENST00000508579 ANP32BQ92688 251 aaKnown RBP11.28□□□□□ -0.6
CAST-222ENST00000508579 FAM193AP78312 1265 aa11.28□□□□□ -0.6
CAST-222ENST00000508579 HSP90AA2PQ14568 343 aaPredicted RBP11.27□□□□□ -0.61
CAST-222ENST00000508579 ZNF622Q969S3 477 aaKnown RBP eCLIP11.27□□□□□ -0.614e-8■■■□□ 14.8
CAST-222ENST00000508579 PHF14O94880 888 aa11.26□□□□□ -0.61
CAST-222ENST00000508579 DNAJC2Q99543 621 aaKnown RBP11.26□□□□□ -0.61
CAST-222ENST00000508579 DSG3P32926 999 aa11.26□□□□□ -0.61
CAST-222ENST00000508579 CENPJQ9HC77 1338 aaPredicted RBP11.25□□□□□ -0.61
CAST-222ENST00000508579 PPM1GO15355 546 aaPredicted RBP11.25□□□□□ -0.61
CAST-222ENST00000508579 MAFGO15525 162 aa11.25□□□□□ -0.61
CAST-222ENST00000508579 PRDM16Q9HAZ2 1276 aa11.25□□□□□ -0.61
CAST-222ENST00000508579 AXDND1Q5T1B0 1012 aaPredicted RBP11.24□□□□□ -0.61
CAST-222ENST00000508579 KCNG1Q9UIX4 513 aa11.24□□□□□ -0.61
CAST-222ENST00000508579 DIEXFQ68CQ4 756 aaKnown RBP11.23□□□□□ -0.61
CAST-222ENST00000508579 ANAPC15P60006 121 aa11.23□□□□□ -0.61
CAST-222ENST00000508579 CWC22Q9HCG8 908 aaKnown RBP11.22□□□□□ -0.61
CAST-222ENST00000508579 PRDM4Q9UKN5 801 aa11.22□□□□□ -0.61
CAST-222ENST00000508579 GPATCH11Q8N954 259 aa11.21□□□□□ -0.62
CAST-222ENST00000508579 ZNF692Q9BU19 519 aaPredicted RBP11.21□□□□□ -0.62
CAST-222ENST00000508579 U3KPZ7 1027 aaPredicted RBP11.21□□□□□ -0.62
CAST-222ENST00000508579 MMP14P50281 582 aa11.2□□□□□ -0.62
CAST-222ENST00000508579 FAM43BQ6ZT52 329 aaPredicted RBP11.18□□□□□ -0.62
CAST-222ENST00000508579 RGS22Q8NE09 1264 aa11.17□□□□□ -0.62
CAST-222ENST00000508579 ZNF526Q8TF50 670 aaPredicted RBP11.16□□□□□ -0.62
CAST-222ENST00000508579 PATL2C9JE40 543 aaKnown RBP11.16□□□□□ -0.62
CAST-222ENST00000508579 NBR1Q14596 966 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 212.3 ms