RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 FKBP8Q14318 412 aa14.2□□□□□ -0.14
CCSER1-207ENST00000508550 MIER1Q8N108 512 aa14.14□□□□□ -0.15
CCSER1-207ENST00000508550 GALR2O43603 387 aaPredicted RBP14.11□□□□□ -0.15
CCSER1-207ENST00000508550 PLEKHG5O94827 1062 aa14.11□□□□□ -0.15
CCSER1-207ENST00000508550 PHF12Q96QT6 1004 aa14.11□□□□□ -0.15
CCSER1-207ENST00000508550 DCBLD2Q96PD2 775 aa14.1□□□□□ -0.15
CCSER1-207ENST00000508550 RSF1Q96T23 1441 aaPredicted RBP14.08□□□□□ -0.15
CCSER1-207ENST00000508550 BICRAQ9NZM4 1560 aa14.07□□□□□ -0.16
CCSER1-207ENST00000508550 SUPT5HO00267 1087 aaKnown RBP14.06□□□□□ -0.16
CCSER1-207ENST00000508550 LHX8Q68G74 356 aa14.06□□□□□ -0.16
CCSER1-207ENST00000508550 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
CCSER1-207ENST00000508550 PLCD3Q8N3E9 789 aa14.02□□□□□ -0.17
CCSER1-207ENST00000508550 CCDC61Q9Y6R9 512 aa14.02□□□□□ -0.17
CCSER1-207ENST00000508550 TSPYL2Q9H2G4 693 aaPredicted RBP14.01□□□□□ -0.17
CCSER1-207ENST00000508550 UNC13AQ9UPW8 1703 aa14.01□□□□□ -0.17
CCSER1-207ENST00000508550 RASEFQ8IZ41 740 aa13.97□□□□□ -0.17
CCSER1-207ENST00000508550 ZBTB47Q9UFB7 747 aaPredicted RBP13.97□□□□□ -0.17
CCSER1-207ENST00000508550 CECR2Q9BXF3 1484 aa13.97□□□□□ -0.17
CCSER1-207ENST00000508550 MS4A3Q96HJ5 214 aa13.94□□□□□ -0.18
CCSER1-207ENST00000508550 FBXO3Q9UK99 471 aa13.94□□□□□ -0.18
CCSER1-207ENST00000508550 KIF12Q96FN5 646 aa13.93□□□□□ -0.18
CCSER1-207ENST00000508550 MROH2BQ7Z745 1585 aa13.92□□□□□ -0.18
CCSER1-207ENST00000508550 NUBP1P53384 320 aa13.91□□□□□ -0.18
CCSER1-207ENST00000508550 ASTLQ6HA08 431 aaPredicted RBP13.88□□□□□ -0.19
CCSER1-207ENST00000508550 PEG3Q9GZU2 1588 aa13.87□□□□□ -0.19
CCSER1-207ENST00000508550 SMARCA4P51532 1647 aa13.86□□□□□ -0.19
CCSER1-207ENST00000508550 PELP1Q8IZL8 1130 aaKnown RBP13.86□□□□□ -0.19
CCSER1-207ENST00000508550 ATMINO43313 823 aaPredicted RBP13.84□□□□□ -0.19
CCSER1-207ENST00000508550 MAP3K13O43283 966 aa13.82□□□□□ -0.2
CCSER1-207ENST00000508550 SGIP1Q9BQI5 828 aa13.78□□□□□ -0.2
CCSER1-207ENST00000508550 SMARCA2P51531 1590 aa13.76□□□□□ -0.21
CCSER1-207ENST00000508550 POTEB2H3BUK9 544 aa13.75□□□□□ -0.21
CCSER1-207ENST00000508550 C7P10643 843 aa13.75□□□□□ -0.21
CCSER1-207ENST00000508550 FAM212AQ96EL1 285 aa13.75□□□□□ -0.21
CCSER1-207ENST00000508550 TOP2AP11388 1531 aaKnown RBP13.74□□□□□ -0.21
CCSER1-207ENST00000508550 VASPP50552 380 aaPredicted RBP13.74□□□□□ -0.21
CCSER1-207ENST00000508550 SLC39A7Q92504 469 aa13.74□□□□□ -0.21
CCSER1-207ENST00000508550 ATAD2BQ9ULI0 1458 aa13.74□□□□□ -0.21
CCSER1-207ENST00000508550 TRPC6Q9Y210 931 aa13.73□□□□□ -0.21
CCSER1-207ENST00000508550 TIE1P35590 1138 aa13.72□□□□□ -0.21
CCSER1-207ENST00000508550 ATN1P54259 1190 aaPredicted RBP13.72□□□□□ -0.21
CCSER1-207ENST00000508550 BMP2KQ9NSY1 1161 aaPredicted RBP13.72□□□□□ -0.21
CCSER1-207ENST00000508550 NCAPD3P42695 1498 aa13.72□□□□□ -0.21
CCSER1-207ENST00000508550 METRNQ9UJH8 293 aa13.7□□□□□ -0.22
CCSER1-207ENST00000508550 WIZO95785 1651 aa13.69□□□□□ -0.22
CCSER1-207ENST00000508550 PCDHB13Q9Y5F0 798 aa13.68□□□□□ -0.22
CCSER1-207ENST00000508550 EIF4G1Q04637 1599 aaKnown RBP13.67□□□□□ -0.22
CCSER1-207ENST00000508550 OTUD5Q96G74 571 aa13.67□□□□□ -0.22
CCSER1-207ENST00000508550 HMGXB3Q12766 1538 aa13.64□□□□□ -0.23
CCSER1-207ENST00000508550 TTLL13PA6NNM8 815 aa13.63□□□□□ -0.23
CCSER1-207ENST00000508550 DCAF8Q5TAQ9 597 aa13.63□□□□□ -0.23
CCSER1-207ENST00000508550 IFNL1Q8IU54 200 aa13.63□□□□□ -0.23
CCSER1-207ENST00000508550 BAZ1BQ9UIG0 1483 aaKnown RBP13.61□□□□□ -0.23
CCSER1-207ENST00000508550 KLHL34Q8N239 644 aa13.61□□□□□ -0.23
CCSER1-207ENST00000508550 POTEJP0CG39 1038 aa13.58□□□□□ -0.24
CCSER1-207ENST00000508550 CCDC88BA6NC98 1476 aa13.58□□□□□ -0.24
CCSER1-207ENST00000508550 POTEFA5A3E0 1075 aa13.57□□□□□ -0.24
CCSER1-207ENST00000508550 GSE1Q14687 1217 aa13.55□□□□□ -0.24
CCSER1-207ENST00000508550 PYGBP11216 843 aa13.54□□□□□ -0.24
CCSER1-207ENST00000508550 IER5LQ5T953 404 aa13.53□□□□□ -0.24
CCSER1-207ENST00000508550 IFNLR1Q8IU57 520 aaPredicted RBP13.53□□□□□ -0.24
CCSER1-207ENST00000508550 TRIM35Q9UPQ4 493 aa13.52□□□□□ -0.25
CCSER1-207ENST00000508550 CHRM1P11229 460 aaPredicted RBP13.51□□□□□ -0.25
CCSER1-207ENST00000508550 MAMSTRQ6ZN01 415 aa13.51□□□□□ -0.25
CCSER1-207ENST00000508550 TMEM106CQ9BVX2 250 aa13.5□□□□□ -0.25
CCSER1-207ENST00000508550 COLQQ9Y215 455 aaPredicted RBP13.48□□□□□ -0.25
CCSER1-207ENST00000508550 SPOCK2Q92563 424 aa13.46□□□□□ -0.25
CCSER1-207ENST00000508550 PCDHB8Q9UN66 801 aa13.45□□□□□ -0.26
CCSER1-207ENST00000508550 SEC24BO95487 1268 aa13.44□□□□□ -0.26
CCSER1-207ENST00000508550 CC2D2AQ9P2K1 1620 aa13.4□□□□□ -0.26
CCSER1-207ENST00000508550 ZNF467Q7Z7K2 595 aaPredicted RBP13.4□□□□□ -0.26
CCSER1-207ENST00000508550 SCUBE2Q9NQ36 999 aa13.4□□□□□ -0.26
CCSER1-207ENST00000508550 TRIM41Q8WV44 630 aa13.38□□□□□ -0.27
CCSER1-207ENST00000508550 CFTRP13569 1480 aa13.37□□□□□ -0.27
CCSER1-207ENST00000508550 IRX5P78411 483 aaPredicted RBP13.37□□□□□ -0.27
CCSER1-207ENST00000508550 CADPSQ9ULU8 1353 aa13.32□□□□□ -0.28
CCSER1-207ENST00000508550 OCEL1Q9H607 264 aa13.31□□□□□ -0.28
CCSER1-207ENST00000508550 CIZ1Q9ULV3 898 aaPredicted RBP13.31□□□□□ -0.28
CCSER1-207ENST00000508550 PLCG2P16885 1265 aa13.3□□□□□ -0.28
CCSER1-207ENST00000508550 PSEN1P49768 467 aa13.27□□□□□ -0.29
CCSER1-207ENST00000508550 WRNQ14191 1432 aaPredicted RBP eCLIP13.25□□□□□ -0.29
CCSER1-207ENST00000508550 EEA1Q15075 1411 aa13.24□□□□□ -0.29
CCSER1-207ENST00000508550 PDAP1Q13442 181 aaKnown RBP13.23□□□□□ -0.29
CCSER1-207ENST00000508550 LCE2DQ5TA82 110 aaPredicted RBP13.2□□□□□ -0.3
CCSER1-207ENST00000508550 POTEMA6NI47 508 aa13.19□□□□□ -0.3
CCSER1-207ENST00000508550 MKRN3Q13064 507 aaKnown RBP13.18□□□□□ -0.3
CCSER1-207ENST00000508550 PDCD7Q8N8D1 485 aaKnown RBP13.18□□□□□ -0.3
CCSER1-207ENST00000508550 POTEGQ6S5H5 508 aa13.17□□□□□ -0.3
CCSER1-207ENST00000508550 ILDR1Q86SU0 546 aaPredicted RBP13.17□□□□□ -0.3
CCSER1-207ENST00000508550 LAMC3Q9Y6N6 1575 aa13.16□□□□□ -0.3
CCSER1-207ENST00000508550 GOLGA2Q08379 1002 aa13.16□□□□□ -0.3
CCSER1-207ENST00000508550 FAM163AQ96GL9 167 aaPredicted RBP13.16□□□□□ -0.3
CCSER1-207ENST00000508550 SLAIN1Q8ND83 568 aa13.14□□□□□ -0.31
CCSER1-207ENST00000508550 PDS5BQ9NTI5 1447 aa13.13□□□□□ -0.31
CCSER1-207ENST00000508550 ABCC8Q09428 1581 aa13.12□□□□□ -0.31
CCSER1-207ENST00000508550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCSER1-207ENST00000508550 TOP2BQ02880 1626 aa13.12□□□□□ -0.31
CCSER1-207ENST00000508550 L3MBTL3Q96JM7 780 aaPredicted RBP13.09□□□□□ -0.31
CCSER1-207ENST00000508550 PCDH10Q9P2E7 1040 aa13.08□□□□□ -0.32
CCSER1-207ENST00000508550 FANCD2Q9BXW9 1451 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms