RNA–Protein interactions for RNA: ENST00000508523.5

GRAMD2B-208, Transcript of GRAM domain containing 2B, humanhuman

TSL 3

Gene GRAMD2B, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-208ENST00000508523 ZBTB47Q9UFB7 747 aaPredicted RBP15.05■□□□□ -0
GRAMD2B-208ENST00000508523 MS4A3Q96HJ5 214 aa15.02■□□□□ -0
GRAMD2B-208ENST00000508523 DCBLD2Q96PD2 775 aa15.02■□□□□ -0
GRAMD2B-208ENST00000508523 VASPP50552 380 aaPredicted RBP15□□□□□ -0.01
GRAMD2B-208ENST00000508523 KIF12Q96FN5 646 aa14.99□□□□□ -0.01
GRAMD2B-208ENST00000508523 MAP3K13O43283 966 aa14.9□□□□□ -0.02
GRAMD2B-208ENST00000508523 LHX8Q68G74 356 aa14.9□□□□□ -0.02
GRAMD2B-208ENST00000508523 ASTLQ6HA08 431 aaPredicted RBP14.88□□□□□ -0.03
GRAMD2B-208ENST00000508523 PELP1Q8IZL8 1130 aaKnown RBP14.88□□□□□ -0.03
GRAMD2B-208ENST00000508523 TRPC6Q9Y210 931 aa14.86□□□□□ -0.03
GRAMD2B-208ENST00000508523 ATMINO43313 823 aaPredicted RBP14.85□□□□□ -0.03
GRAMD2B-208ENST00000508523 FAM212AQ96EL1 285 aa14.85□□□□□ -0.03
GRAMD2B-208ENST00000508523 IFNLR1Q8IU57 520 aaPredicted RBP14.8□□□□□ -0.04
GRAMD2B-208ENST00000508523 SGIP1Q9BQI5 828 aa14.79□□□□□ -0.04
GRAMD2B-208ENST00000508523 KLHL34Q8N239 644 aa14.77□□□□□ -0.05
GRAMD2B-208ENST00000508523 BMP2KQ9NSY1 1161 aaPredicted RBP14.77□□□□□ -0.05
GRAMD2B-208ENST00000508523 ATN1P54259 1190 aaPredicted RBP14.76□□□□□ -0.05
GRAMD2B-208ENST00000508523 PCDHB13Q9Y5F0 798 aa14.75□□□□□ -0.05
GRAMD2B-208ENST00000508523 TIE1P35590 1138 aa14.74□□□□□ -0.05
GRAMD2B-208ENST00000508523 DCAF8Q5TAQ9 597 aa14.74□□□□□ -0.05
GRAMD2B-208ENST00000508523 POTEB2H3BUK9 544 aa14.73□□□□□ -0.05
GRAMD2B-208ENST00000508523 IFNL1Q8IU54 200 aa14.72□□□□□ -0.05
GRAMD2B-208ENST00000508523 PYGBP11216 843 aa14.69□□□□□ -0.06
GRAMD2B-208ENST00000508523 TTLL13PA6NNM8 815 aa14.68□□□□□ -0.06
GRAMD2B-208ENST00000508523 SLC39A7Q92504 469 aa14.68□□□□□ -0.06
GRAMD2B-208ENST00000508523 METRNQ9UJH8 293 aa14.68□□□□□ -0.06
GRAMD2B-208ENST00000508523 C7P10643 843 aa14.66□□□□□ -0.06
GRAMD2B-208ENST00000508523 GSE1Q14687 1217 aa14.64□□□□□ -0.07
GRAMD2B-208ENST00000508523 SPOCK2Q92563 424 aa14.64□□□□□ -0.07
GRAMD2B-208ENST00000508523 POTEFA5A3E0 1075 aa14.61□□□□□ -0.07
GRAMD2B-208ENST00000508523 POTEJP0CG39 1038 aa14.58□□□□□ -0.08
GRAMD2B-208ENST00000508523 OTUD5Q96G74 571 aa14.58□□□□□ -0.08
GRAMD2B-208ENST00000508523 CHRM1P11229 460 aaPredicted RBP14.57□□□□□ -0.08
GRAMD2B-208ENST00000508523 PCDHB8Q9UN66 801 aa14.56□□□□□ -0.08
GRAMD2B-208ENST00000508523 TRIM35Q9UPQ4 493 aa14.56□□□□□ -0.08
GRAMD2B-208ENST00000508523 TMEM106CQ9BVX2 250 aa14.53□□□□□ -0.08
GRAMD2B-208ENST00000508523 COLQQ9Y215 455 aaPredicted RBP14.5□□□□□ -0.09
GRAMD2B-208ENST00000508523 IER5LQ5T953 404 aa14.48□□□□□ -0.09
GRAMD2B-208ENST00000508523 CIZ1Q9ULV3 898 aaPredicted RBP14.47□□□□□ -0.09
GRAMD2B-208ENST00000508523 ZNF467Q7Z7K2 595 aaPredicted RBP14.46□□□□□ -0.09
GRAMD2B-208ENST00000508523 IRX5P78411 483 aaPredicted RBP14.39□□□□□ -0.11
GRAMD2B-208ENST00000508523 SEC24BO95487 1268 aa14.37□□□□□ -0.11
GRAMD2B-208ENST00000508523 PSEN1P49768 467 aa14.34□□□□□ -0.11
GRAMD2B-208ENST00000508523 MAMSTRQ6ZN01 415 aa14.34□□□□□ -0.11
GRAMD2B-208ENST00000508523 TRIM41Q8WV44 630 aa14.32□□□□□ -0.12
GRAMD2B-208ENST00000508523 PDAP1Q13442 181 aaKnown RBP14.31□□□□□ -0.12
GRAMD2B-208ENST00000508523 SCUBE2Q9NQ36 999 aa14.28□□□□□ -0.12
GRAMD2B-208ENST00000508523 PLCG2P16885 1265 aa14.27□□□□□ -0.13
GRAMD2B-208ENST00000508523 OCEL1Q9H607 264 aa14.26□□□□□ -0.13
GRAMD2B-208ENST00000508523 RNF25Q96BH1 459 aaPredicted RBP14.25□□□□□ -0.13
GRAMD2B-208ENST00000508523 PDCD7Q8N8D1 485 aaKnown RBP14.24□□□□□ -0.13
GRAMD2B-208ENST00000508523 ILDR1Q86SU0 546 aaPredicted RBP14.21□□□□□ -0.13
GRAMD2B-208ENST00000508523 MKRN3Q13064 507 aaKnown RBP14.18□□□□□ -0.14
GRAMD2B-208ENST00000508523 GOLGA2Q08379 1002 aa14.16□□□□□ -0.14
GRAMD2B-208ENST00000508523 CABP2Q9NPB3 220 aa14.16□□□□□ -0.14
GRAMD2B-208ENST00000508523 RIOK3O14730 519 aaKnown RBP14.14□□□□□ -0.15
GRAMD2B-208ENST00000508523 LCE2DQ5TA82 110 aaPredicted RBP14.14□□□□□ -0.15
GRAMD2B-208ENST00000508523 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.12□□□□□ -0.153e-6■■■■■ 28.3
GRAMD2B-208ENST00000508523 PKD2Q13563 968 aa14.09□□□□□ -0.15
GRAMD2B-208ENST00000508523 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.07□□□□□ -0.16
GRAMD2B-208ENST00000508523 ZFP91Q96JP5 570 aaPredicted RBP14.07□□□□□ -0.16
GRAMD2B-208ENST00000508523 VGFO15240 615 aaPredicted RBP14.06□□□□□ -0.16
GRAMD2B-208ENST00000508523 DPY19L2Q6NUT2 758 aa14.06□□□□□ -0.16
GRAMD2B-208ENST00000508523 SLAIN1Q8ND83 568 aa14.06□□□□□ -0.16
GRAMD2B-208ENST00000508523 EFCAB3Q8N7B9 438 aa14.05□□□□□ -0.16
GRAMD2B-208ENST00000508523 L3MBTL3Q96JM7 780 aaPredicted RBP14.01□□□□□ -0.17
GRAMD2B-208ENST00000508523 POTEMA6NI47 508 aa14□□□□□ -0.17
GRAMD2B-208ENST00000508523 ECM2O94769 699 aaPredicted RBP14□□□□□ -0.17
GRAMD2B-208ENST00000508523 POTEGQ6S5H5 508 aa13.99□□□□□ -0.17
GRAMD2B-208ENST00000508523 FAM163AQ96GL9 167 aaPredicted RBP13.99□□□□□ -0.17
GRAMD2B-208ENST00000508523 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.99□□□□□ -0.17
GRAMD2B-208ENST00000508523 RGL2O15211 777 aa13.95□□□□□ -0.18
GRAMD2B-208ENST00000508523 SOX12O15370 315 aa13.92□□□□□ -0.18
GRAMD2B-208ENST00000508523 C3orf67Q6ZVT6 689 aa13.92□□□□□ -0.18
GRAMD2B-208ENST00000508523 MS4A4AQ96JQ5 239 aa13.92□□□□□ -0.18
GRAMD2B-208ENST00000508523 BOLA1Q9Y3E2 137 aa13.92□□□□□ -0.18
GRAMD2B-208ENST00000508523 TMEM121BQ9BXQ6 578 aaPredicted RBP13.91□□□□□ -0.18
GRAMD2B-208ENST00000508523 BCL11BQ9C0K0 894 aaPredicted RBP13.91□□□□□ -0.18
GRAMD2B-208ENST00000508523 ST18O60284 1047 aa13.88□□□□□ -0.19
GRAMD2B-208ENST00000508523 TAOK2Q9UL54 1235 aa13.88□□□□□ -0.19
GRAMD2B-208ENST00000508523 PHF8Q9UPP1 1060 aa13.88□□□□□ -0.19
GRAMD2B-208ENST00000508523 FBXO22Q8NEZ5 403 aa13.84□□□□□ -0.19
GRAMD2B-208ENST00000508523 STK24Q9Y6E0 443 aa13.84□□□□□ -0.19
GRAMD2B-208ENST00000508523 STK25O00506 426 aa13.82□□□□□ -0.2
GRAMD2B-208ENST00000508523 MFRPQ9BY79 579 aa13.81□□□□□ -0.2
GRAMD2B-208ENST00000508523 MICALL2Q8IY33 904 aa13.8□□□□□ -0.2
GRAMD2B-208ENST00000508523 G3V3G9 751 aa13.78□□□□□ -0.2
GRAMD2B-208ENST00000508523 SNPHO15079 494 aa13.78□□□□□ -0.2
GRAMD2B-208ENST00000508523 NLRP6P59044 892 aa13.77□□□□□ -0.21
GRAMD2B-208ENST00000508523 TMEM92Q6UXU6 159 aa13.76□□□□□ -0.21
GRAMD2B-208ENST00000508523 PCDH10Q9P2E7 1040 aa13.74□□□□□ -0.21
GRAMD2B-208ENST00000508523 HOXB3P14651 431 aaPredicted RBP13.71□□□□□ -0.21
GRAMD2B-208ENST00000508523 HS6ST3Q8IZP7 471 aa13.65□□□□□ -0.22
GRAMD2B-208ENST00000508523 MARVELD3Q96A59 401 aa13.65□□□□□ -0.22
GRAMD2B-208ENST00000508523 CDAN1Q8IWY9 1227 aa13.62□□□□□ -0.23
GRAMD2B-208ENST00000508523 PLSCR2Q9NRY7 297 aa13.61□□□□□ -0.23
GRAMD2B-208ENST00000508523 PPP1R37O75864 691 aa13.58□□□□□ -0.24
GRAMD2B-208ENST00000508523 KIF3CO14782 793 aa13.56□□□□□ -0.24
GRAMD2B-208ENST00000508523 DNAJC5Q9H3Z4 198 aa13.56□□□□□ -0.24
GRAMD2B-208ENST00000508523 POTEB3A0JP26 581 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms