RNA–Protein interactions for RNA: ENST00000508454.1

USO1-202, Transcript of USO1 vesicle transport factor, humanhuman

TSL 3

Gene USO1, Length 365 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-202ENST00000508454 FBXO3Q9UK99 471 aa13.95□□□□□ -0.18
USO1-202ENST00000508454 DCBLD2Q96PD2 775 aa13.94□□□□□ -0.18
USO1-202ENST00000508454 KIF12Q96FN5 646 aa13.92□□□□□ -0.18
USO1-202ENST00000508454 VASPP50552 380 aaPredicted RBP13.89□□□□□ -0.19
USO1-202ENST00000508454 ZBTB47Q9UFB7 747 aaPredicted RBP13.88□□□□□ -0.19
USO1-202ENST00000508454 LHX8Q68G74 356 aa13.86□□□□□ -0.19
USO1-202ENST00000508454 PELP1Q8IZL8 1130 aaKnown RBP13.86□□□□□ -0.19
USO1-202ENST00000508454 MAP3K13O43283 966 aa13.84□□□□□ -0.19
USO1-202ENST00000508454 TRPC6Q9Y210 931 aa13.84□□□□□ -0.19
USO1-202ENST00000508454 ASTLQ6HA08 431 aaPredicted RBP13.82□□□□□ -0.2
USO1-202ENST00000508454 ATMINO43313 823 aaPredicted RBP13.8□□□□□ -0.2
USO1-202ENST00000508454 FAM212AQ96EL1 285 aa13.75□□□□□ -0.21
USO1-202ENST00000508454 POTEB2H3BUK9 544 aa13.73□□□□□ -0.21
USO1-202ENST00000508454 BMP2KQ9NSY1 1161 aaPredicted RBP13.73□□□□□ -0.21
USO1-202ENST00000508454 ATN1P54259 1190 aaPredicted RBP13.72□□□□□ -0.21
USO1-202ENST00000508454 IFNLR1Q8IU57 520 aaPredicted RBP13.72□□□□□ -0.21
USO1-202ENST00000508454 IFNL1Q8IU54 200 aa13.68□□□□□ -0.22
USO1-202ENST00000508454 SGIP1Q9BQI5 828 aa13.68□□□□□ -0.22
USO1-202ENST00000508454 PCDHB13Q9Y5F0 798 aa13.68□□□□□ -0.22
USO1-202ENST00000508454 TIE1P35590 1138 aa13.66□□□□□ -0.22
USO1-202ENST00000508454 KLHL34Q8N239 644 aa13.66□□□□□ -0.22
USO1-202ENST00000508454 DCAF8Q5TAQ9 597 aa13.65□□□□□ -0.22
USO1-202ENST00000508454 METRNQ9UJH8 293 aa13.65□□□□□ -0.22
USO1-202ENST00000508454 TTLL13PA6NNM8 815 aa13.63□□□□□ -0.23
USO1-202ENST00000508454 PYGBP11216 843 aa13.63□□□□□ -0.23
USO1-202ENST00000508454 POTEFA5A3E0 1075 aa13.61□□□□□ -0.23
USO1-202ENST00000508454 SLC39A7Q92504 469 aa13.61□□□□□ -0.23
USO1-202ENST00000508454 POTEJP0CG39 1038 aa13.6□□□□□ -0.23
USO1-202ENST00000508454 C7P10643 843 aa13.6□□□□□ -0.23
USO1-202ENST00000508454 OTUD5Q96G74 571 aa13.58□□□□□ -0.24
USO1-202ENST00000508454 SPOCK2Q92563 424 aa13.54□□□□□ -0.24
USO1-202ENST00000508454 GSE1Q14687 1217 aa13.53□□□□□ -0.24
USO1-202ENST00000508454 PCDHB8Q9UN66 801 aa13.53□□□□□ -0.24
USO1-202ENST00000508454 TRIM35Q9UPQ4 493 aa13.52□□□□□ -0.25
USO1-202ENST00000508454 COLQQ9Y215 455 aaPredicted RBP13.5□□□□□ -0.25
USO1-202ENST00000508454 TMEM106CQ9BVX2 250 aa13.49□□□□□ -0.25
USO1-202ENST00000508454 CHRM1P11229 460 aaPredicted RBP13.48□□□□□ -0.25
USO1-202ENST00000508454 IER5LQ5T953 404 aa13.42□□□□□ -0.26
USO1-202ENST00000508454 CIZ1Q9ULV3 898 aaPredicted RBP13.39□□□□□ -0.27
USO1-202ENST00000508454 ZNF467Q7Z7K2 595 aaPredicted RBP13.38□□□□□ -0.27
USO1-202ENST00000508454 IRX5P78411 483 aaPredicted RBP13.36□□□□□ -0.27
USO1-202ENST00000508454 SEC24BO95487 1268 aa13.33□□□□□ -0.28
USO1-202ENST00000508454 PSEN1P49768 467 aa13.3□□□□□ -0.28
USO1-202ENST00000508454 MAMSTRQ6ZN01 415 aa13.28□□□□□ -0.28
USO1-202ENST00000508454 PDAP1Q13442 181 aaKnown RBP13.25□□□□□ -0.29
USO1-202ENST00000508454 RNF25Q96BH1 459 aaPredicted RBP13.24□□□□□ -0.29
USO1-202ENST00000508454 SCUBE2Q9NQ36 999 aa13.24□□□□□ -0.29
USO1-202ENST00000508454 PLCG2P16885 1265 aa13.23□□□□□ -0.29
USO1-202ENST00000508454 PDCD7Q8N8D1 485 aaKnown RBP13.23□□□□□ -0.29
USO1-202ENST00000508454 OCEL1Q9H607 264 aa13.23□□□□□ -0.29
USO1-202ENST00000508454 TRIM41Q8WV44 630 aa13.21□□□□□ -0.29
USO1-202ENST00000508454 LCE2DQ5TA82 110 aaPredicted RBP13.2□□□□□ -0.3
USO1-202ENST00000508454 ILDR1Q86SU0 546 aaPredicted RBP13.19□□□□□ -0.3
USO1-202ENST00000508454 CABP2Q9NPB3 220 aa13.14□□□□□ -0.31
USO1-202ENST00000508454 MKRN3Q13064 507 aaKnown RBP13.13□□□□□ -0.31
USO1-202ENST00000508454 GOLGA2Q08379 1002 aa13.1□□□□□ -0.31
USO1-202ENST00000508454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.1□□□□□ -0.312e-14■■■■□ 25.1
USO1-202ENST00000508454 RIOK3O14730 519 aaKnown RBP13.09□□□□□ -0.31
USO1-202ENST00000508454 DPY19L2Q6NUT2 758 aa13.08□□□□□ -0.32
USO1-202ENST00000508454 SLAIN1Q8ND83 568 aa13.06□□□□□ -0.32
USO1-202ENST00000508454 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.05□□□□□ -0.32
USO1-202ENST00000508454 PKD2Q13563 968 aa13.05□□□□□ -0.32
USO1-202ENST00000508454 ZFP91Q96JP5 570 aaPredicted RBP13.05□□□□□ -0.32
USO1-202ENST00000508454 POTEMA6NI47 508 aa13.04□□□□□ -0.32
USO1-202ENST00000508454 EFCAB3Q8N7B9 438 aa13.04□□□□□ -0.32
USO1-202ENST00000508454 POTEGQ6S5H5 508 aa13.02□□□□□ -0.33
USO1-202ENST00000508454 VGFO15240 615 aaPredicted RBP13.01□□□□□ -0.33
USO1-202ENST00000508454 FAM163AQ96GL9 167 aaPredicted RBP13.01□□□□□ -0.33
USO1-202ENST00000508454 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.97□□□□□ -0.33
USO1-202ENST00000508454 L3MBTL3Q96JM7 780 aaPredicted RBP12.96□□□□□ -0.33
USO1-202ENST00000508454 ECM2O94769 699 aaPredicted RBP12.95□□□□□ -0.34
USO1-202ENST00000508454 RGL2O15211 777 aa12.94□□□□□ -0.34
USO1-202ENST00000508454 MS4A4AQ96JQ5 239 aa12.94□□□□□ -0.34
USO1-202ENST00000508454 TMEM121BQ9BXQ6 578 aaPredicted RBP12.91□□□□□ -0.34
USO1-202ENST00000508454 BOLA1Q9Y3E2 137 aa12.91□□□□□ -0.34
USO1-202ENST00000508454 ST18O60284 1047 aa12.9□□□□□ -0.34
USO1-202ENST00000508454 C3orf67Q6ZVT6 689 aa12.9□□□□□ -0.34
USO1-202ENST00000508454 BCL11BQ9C0K0 894 aaPredicted RBP12.89□□□□□ -0.35
USO1-202ENST00000508454 PHF8Q9UPP1 1060 aa12.89□□□□□ -0.35
USO1-202ENST00000508454 SOX12O15370 315 aa12.87□□□□□ -0.35
USO1-202ENST00000508454 FBXO22Q8NEZ5 403 aa12.84□□□□□ -0.35
USO1-202ENST00000508454 STK24Q9Y6E0 443 aa12.82□□□□□ -0.36
USO1-202ENST00000508454 MICALL2Q8IY33 904 aa12.81□□□□□ -0.36
USO1-202ENST00000508454 MFRPQ9BY79 579 aa12.81□□□□□ -0.36
USO1-202ENST00000508454 STK25O00506 426 aa12.8□□□□□ -0.36
USO1-202ENST00000508454 TMEM92Q6UXU6 159 aa12.8□□□□□ -0.36
USO1-202ENST00000508454 TAOK2Q9UL54 1235 aa12.78□□□□□ -0.36
USO1-202ENST00000508454 SNPHO15079 494 aa12.75□□□□□ -0.37
USO1-202ENST00000508454 HOXB3P14651 431 aaPredicted RBP12.75□□□□□ -0.37
USO1-202ENST00000508454 G3V3G9 751 aa12.74□□□□□ -0.37
USO1-202ENST00000508454 NLRP6P59044 892 aa12.74□□□□□ -0.37
USO1-202ENST00000508454 PCDH10Q9P2E7 1040 aa12.73□□□□□ -0.37
USO1-202ENST00000508454 MARVELD3Q96A59 401 aa12.71□□□□□ -0.37
USO1-202ENST00000508454 PLSCR2Q9NRY7 297 aa12.7□□□□□ -0.38
USO1-202ENST00000508454 CDAN1Q8IWY9 1227 aa12.67□□□□□ -0.38
USO1-202ENST00000508454 POTEB3A0JP26 581 aa12.64□□□□□ -0.39
USO1-202ENST00000508454 POTEBQ6S5H4 581 aa12.64□□□□□ -0.39
USO1-202ENST00000508454 HS6ST3Q8IZP7 471 aa12.64□□□□□ -0.39
USO1-202ENST00000508454 PPP1R37O75864 691 aa12.61□□□□□ -0.39
USO1-202ENST00000508454 KIF3CO14782 793 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms