RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 POTEHQ6S545 545 aa13.86□□□□□ -0.19
GYPA-205ENST00000508337 HAX1O00165 279 aa13.85□□□□□ -0.19
GYPA-205ENST00000508337 DCAF8L2P0C7V8 631 aa13.85□□□□□ -0.19
GYPA-205ENST00000508337 ZRANB1Q9UGI0 708 aa13.83□□□□□ -0.2
GYPA-205ENST00000508337 PKD2Q13563 968 aa13.8□□□□□ -0.2
GYPA-205ENST00000508337 PYGBP11216 843 aa13.76□□□□□ -0.21
GYPA-205ENST00000508337 C19orf67A6NJJ6 358 aa13.74□□□□□ -0.21
GYPA-205ENST00000508337 CCDC61Q9Y6R9 512 aa13.7□□□□□ -0.22
GYPA-205ENST00000508337 TAOK2Q9UL54 1235 aa13.68□□□□□ -0.22
GYPA-205ENST00000508337 PHF12Q96QT6 1004 aa13.65□□□□□ -0.22
GYPA-205ENST00000508337 ZNF579Q8NAF0 562 aaKnown RBP13.64□□□□□ -0.23
GYPA-205ENST00000508337 RGL2O15211 777 aa13.63□□□□□ -0.23
GYPA-205ENST00000508337 CHRM1P11229 460 aaPredicted RBP13.63□□□□□ -0.23
GYPA-205ENST00000508337 ZNF467Q7Z7K2 595 aaPredicted RBP13.63□□□□□ -0.23
GYPA-205ENST00000508337 PCDHB13Q9Y5F0 798 aa13.63□□□□□ -0.23
GYPA-205ENST00000508337 RIOK3O14730 519 aaKnown RBP13.61□□□□□ -0.23
GYPA-205ENST00000508337 MAP3K13O43283 966 aa13.57□□□□□ -0.24
GYPA-205ENST00000508337 KIF12Q96FN5 646 aa13.57□□□□□ -0.24
GYPA-205ENST00000508337 VGFO15240 615 aaPredicted RBP13.54□□□□□ -0.24
GYPA-205ENST00000508337 SGIP1Q9BQI5 828 aa13.54□□□□□ -0.24
GYPA-205ENST00000508337 CLCN6P51797 869 aa13.52□□□□□ -0.25
GYPA-205ENST00000508337 PCDHB8Q9UN66 801 aa13.52□□□□□ -0.25
GYPA-205ENST00000508337 RNF25Q96BH1 459 aaPredicted RBP13.51□□□□□ -0.25
GYPA-205ENST00000508337 EVX2Q03828 476 aa13.5□□□□□ -0.25
GYPA-205ENST00000508337 MS4A3Q96HJ5 214 aa13.49□□□□□ -0.25
GYPA-205ENST00000508337 CHGAP10645 457 aaKnown RBP13.48□□□□□ -0.25
GYPA-205ENST00000508337 PDAP1Q13442 181 aaKnown RBP13.48□□□□□ -0.25
GYPA-205ENST00000508337 IFNL1Q8IU54 200 aa13.48□□□□□ -0.25
GYPA-205ENST00000508337 STK25O00506 426 aa13.46□□□□□ -0.25
GYPA-205ENST00000508337 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.43□□□□□ -0.26
GYPA-205ENST00000508337 PSEN1P49768 467 aa13.43□□□□□ -0.26
GYPA-205ENST00000508337 ZFP91Q96JP5 570 aaPredicted RBP13.43□□□□□ -0.26
GYPA-205ENST00000508337 STK24Q9Y6E0 443 aa13.42□□□□□ -0.26
GYPA-205ENST00000508337 GALR2O43603 387 aaPredicted RBP13.4□□□□□ -0.26
GYPA-205ENST00000508337 GOLGA2Q08379 1002 aa13.4□□□□□ -0.26
GYPA-205ENST00000508337 SP7Q8TDD2 431 aaPredicted RBP13.39□□□□□ -0.27
GYPA-205ENST00000508337 BCL11BQ9C0K0 894 aaPredicted RBP13.39□□□□□ -0.27
GYPA-205ENST00000508337 HS6ST3Q8IZP7 471 aa13.37□□□□□ -0.27
GYPA-205ENST00000508337 GABBR2O75899 941 aa13.36□□□□□ -0.27
GYPA-205ENST00000508337 TMEM106CQ9BVX2 250 aa13.36□□□□□ -0.27
GYPA-205ENST00000508337 DCBLD2Q96PD2 775 aa13.35□□□□□ -0.27
GYPA-205ENST00000508337 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.35□□□□□ -0.27
GYPA-205ENST00000508337 TIE1P35590 1138 aa13.33□□□□□ -0.28
GYPA-205ENST00000508337 CABP2Q9NPB3 220 aa13.3□□□□□ -0.28
GYPA-205ENST00000508337 BBXQ8WY36 941 aaPredicted RBP13.29□□□□□ -0.28
GYPA-205ENST00000508337 TRPC6Q9Y210 931 aa13.28□□□□□ -0.28
GYPA-205ENST00000508337 MKRN3Q13064 507 aaKnown RBP13.26□□□□□ -0.29
GYPA-205ENST00000508337 TTLL13PA6NNM8 815 aa13.25□□□□□ -0.29
GYPA-205ENST00000508337 BMP2KQ9NSY1 1161 aaPredicted RBP13.25□□□□□ -0.29
GYPA-205ENST00000508337 TRIM35Q9UPQ4 493 aa13.22□□□□□ -0.29
GYPA-205ENST00000508337 RYDENQ9NUL5 291 aaKnown RBP13.2□□□□□ -0.3
GYPA-205ENST00000508337 CFAP44Q96MT7 982 aa13.19□□□□□ -0.3
GYPA-205ENST00000508337 ATMINO43313 823 aaPredicted RBP13.17□□□□□ -0.3
GYPA-205ENST00000508337 EFCAB3Q8N7B9 438 aa13.17□□□□□ -0.3
GYPA-205ENST00000508337 ATN1P54259 1190 aaPredicted RBP13.16□□□□□ -0.3
GYPA-205ENST00000508337 PAXIP1Q6ZW49 1069 aaPredicted RBP13.16□□□□□ -0.3
GYPA-205ENST00000508337 ASTLQ6HA08 431 aaPredicted RBP13.15□□□□□ -0.3
GYPA-205ENST00000508337 SPRYD3Q8NCJ5 442 aa13.15□□□□□ -0.3
GYPA-205ENST00000508337 SOX12O15370 315 aa13.12□□□□□ -0.31
GYPA-205ENST00000508337 NLRP6P59044 892 aa13.12□□□□□ -0.31
GYPA-205ENST00000508337 DNAJC5Q9H3Z4 198 aa13.12□□□□□ -0.31
GYPA-205ENST00000508337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.1□□□□□ -0.31
GYPA-205ENST00000508337 SEC24BO95487 1268 aa13.09□□□□□ -0.31
GYPA-205ENST00000508337 PLCB2Q00722 1185 aa13.08□□□□□ -0.32
GYPA-205ENST00000508337 IER5LQ5T953 404 aa13.08□□□□□ -0.32
GYPA-205ENST00000508337 SLC39A7Q92504 469 aa13.08□□□□□ -0.32
GYPA-205ENST00000508337 PLCG2P16885 1265 aa13.07□□□□□ -0.32
GYPA-205ENST00000508337 NKX1-1Q15270 411 aaPredicted RBP13.07□□□□□ -0.32
GYPA-205ENST00000508337 PHF8Q9UPP1 1060 aa13.07□□□□□ -0.32
GYPA-205ENST00000508337 G3V3G9 751 aa13.04□□□□□ -0.32
GYPA-205ENST00000508337 MFRPQ9BY79 579 aa13.04□□□□□ -0.32
GYPA-205ENST00000508337 HAP1P54257 671 aaPredicted RBP13.03□□□□□ -0.32
GYPA-205ENST00000508337 METRNQ9UJH8 293 aa13.02□□□□□ -0.33
GYPA-205ENST00000508337 C7P10643 843 aa13.01□□□□□ -0.33
GYPA-205ENST00000508337 OCEL1Q9H607 264 aa12.99□□□□□ -0.33
GYPA-205ENST00000508337 GTPBP6O43824 516 aaPredicted RBP12.98□□□□□ -0.33
GYPA-205ENST00000508337 PELP1Q8IZL8 1130 aaKnown RBP12.98□□□□□ -0.33
GYPA-205ENST00000508337 POTEIP0CG38 1075 aa12.97□□□□□ -0.33
GYPA-205ENST00000508337 FBXO22Q8NEZ5 403 aa12.95□□□□□ -0.34
GYPA-205ENST00000508337 IRX5P78411 483 aaPredicted RBP12.94□□□□□ -0.34
GYPA-205ENST00000508337 SLC24A1O60721 1099 aa12.9□□□□□ -0.34
GYPA-205ENST00000508337 L3MBTL3Q96JM7 780 aaPredicted RBP12.89□□□□□ -0.35
GYPA-205ENST00000508337 MS4A4AQ96JQ5 239 aa12.89□□□□□ -0.35
GYPA-205ENST00000508337 PDCD7Q8N8D1 485 aaKnown RBP12.87□□□□□ -0.35
GYPA-205ENST00000508337 COLQQ9Y215 455 aaPredicted RBP12.86□□□□□ -0.35
GYPA-205ENST00000508337 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
GYPA-205ENST00000508337 BOLA1Q9Y3E2 137 aa12.84□□□□□ -0.35
GYPA-205ENST00000508337 PPP1R37O75864 691 aa12.83□□□□□ -0.36
GYPA-205ENST00000508337 C3orf67Q6ZVT6 689 aa12.83□□□□□ -0.36
GYPA-205ENST00000508337 ILDR1Q86SU0 546 aaPredicted RBP12.83□□□□□ -0.36
GYPA-205ENST00000508337 TSHZ2Q9NRE2 1034 aa12.8□□□□□ -0.36
GYPA-205ENST00000508337 MICALL2Q8IY33 904 aa12.79□□□□□ -0.36
GYPA-205ENST00000508337 POTEFA5A3E0 1075 aa12.75□□□□□ -0.37
GYPA-205ENST00000508337 SCUBE2Q9NQ36 999 aa12.73□□□□□ -0.37
GYPA-205ENST00000508337 TMC2Q8TDI7 906 aa12.72□□□□□ -0.37
GYPA-205ENST00000508337 WDR70Q9NW82 654 aa12.72□□□□□ -0.37
GYPA-205ENST00000508337 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.72□□□□□ -0.37
GYPA-205ENST00000508337 MAMSTRQ6ZN01 415 aa12.7□□□□□ -0.38
GYPA-205ENST00000508337 VSIG10Q8N0Z9 540 aa12.69□□□□□ -0.38
GYPA-205ENST00000508337 PDE4AP27815 886 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms