RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 ASTLQ6HA08 431 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC13-209ENST00000508304 RASEFQ8IZ41 740 aa16.63■□□□□ 0.25
TRAPPC13-209ENST00000508304 PLCD3Q8N3E9 789 aa16.63■□□□□ 0.25
TRAPPC13-209ENST00000508304 KIF12Q96FN5 646 aa16.62■□□□□ 0.25
TRAPPC13-209ENST00000508304 ATMINO43313 823 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC13-209ENST00000508304 POTEB2H3BUK9 544 aa16.59■□□□□ 0.25
TRAPPC13-209ENST00000508304 OTUD5Q96G74 571 aa16.53■□□□□ 0.24
TRAPPC13-209ENST00000508304 ZBTB47Q9UFB7 747 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC13-209ENST00000508304 MAP3K13O43283 966 aa16.51■□□□□ 0.23
TRAPPC13-209ENST00000508304 METRNQ9UJH8 293 aa16.51■□□□□ 0.23
TRAPPC13-209ENST00000508304 SLC39A7Q92504 469 aa16.5■□□□□ 0.23
TRAPPC13-209ENST00000508304 C7P10643 843 aa16.49■□□□□ 0.23
TRAPPC13-209ENST00000508304 NUBP1P53384 320 aa16.49■□□□□ 0.23
TRAPPC13-209ENST00000508304 ATN1P54259 1190 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC13-209ENST00000508304 TRPC6Q9Y210 931 aa16.46■□□□□ 0.23
TRAPPC13-209ENST00000508304 BMP2KQ9NSY1 1161 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC13-209ENST00000508304 TIE1P35590 1138 aa16.41■□□□□ 0.22
TRAPPC13-209ENST00000508304 SGIP1Q9BQI5 828 aa16.37■□□□□ 0.21
TRAPPC13-209ENST00000508304 POTEJP0CG39 1038 aa16.36■□□□□ 0.21
TRAPPC13-209ENST00000508304 FBXO3Q9UK99 471 aa16.35■□□□□ 0.21
TRAPPC13-209ENST00000508304 FAM212AQ96EL1 285 aa16.34■□□□□ 0.21
TRAPPC13-209ENST00000508304 PCDHB13Q9Y5F0 798 aa16.33■□□□□ 0.2
TRAPPC13-209ENST00000508304 TTLL13PA6NNM8 815 aa16.31■□□□□ 0.2
TRAPPC13-209ENST00000508304 POTEFA5A3E0 1075 aa16.29■□□□□ 0.2
TRAPPC13-209ENST00000508304 MAMSTRQ6ZN01 415 aa16.25■□□□□ 0.19
TRAPPC13-209ENST00000508304 IFNL1Q8IU54 200 aa16.25■□□□□ 0.19
TRAPPC13-209ENST00000508304 TRIM35Q9UPQ4 493 aa16.2■□□□□ 0.18
TRAPPC13-209ENST00000508304 VASPP50552 380 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC13-209ENST00000508304 DCAF8Q5TAQ9 597 aa16.17■□□□□ 0.18
TRAPPC13-209ENST00000508304 COLQQ9Y215 455 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC13-209ENST00000508304 IER5LQ5T953 404 aa16.16■□□□□ 0.18
TRAPPC13-209ENST00000508304 SCUBE2Q9NQ36 999 aa16.16■□□□□ 0.18
TRAPPC13-209ENST00000508304 SEC24BO95487 1268 aa16.13■□□□□ 0.17
TRAPPC13-209ENST00000508304 TMEM106CQ9BVX2 250 aa16.12■□□□□ 0.17
TRAPPC13-209ENST00000508304 PYGBP11216 843 aa16.11■□□□□ 0.17
TRAPPC13-209ENST00000508304 KLHL34Q8N239 644 aa16.07■□□□□ 0.16
TRAPPC13-209ENST00000508304 POTEMA6NI47 508 aa16.06■□□□□ 0.16
TRAPPC13-209ENST00000508304 POTEGQ6S5H5 508 aa16.03■□□□□ 0.16
TRAPPC13-209ENST00000508304 GSE1Q14687 1217 aa16.01■□□□□ 0.15
TRAPPC13-209ENST00000508304 PCDHB8Q9UN66 801 aa16.01■□□□□ 0.15
TRAPPC13-209ENST00000508304 LCE2DQ5TA82 110 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC13-209ENST00000508304 IRX5P78411 483 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC13-209ENST00000508304 PLCG2P16885 1265 aa15.95■□□□□ 0.14
TRAPPC13-209ENST00000508304 CHRM1P11229 460 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC13-209ENST00000508304 FAM163AQ96GL9 167 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC13-209ENST00000508304 PLSCR2Q9NRY7 297 aa15.92■□□□□ 0.14
TRAPPC13-209ENST00000508304 ZNF467Q7Z7K2 595 aaPredicted RBP15.9■□□□□ 0.14
TRAPPC13-209ENST00000508304 IFNLR1Q8IU57 520 aaPredicted RBP15.88■□□□□ 0.13
TRAPPC13-209ENST00000508304 OCEL1Q9H607 264 aa15.88■□□□□ 0.13
TRAPPC13-209ENST00000508304 SPOCK2Q92563 424 aa15.83■□□□□ 0.12
TRAPPC13-209ENST00000508304 PCDH10Q9P2E7 1040 aa15.83■□□□□ 0.12
TRAPPC13-209ENST00000508304 SLAIN1Q8ND83 568 aa15.82■□□□□ 0.12
TRAPPC13-209ENST00000508304 PSEN1P49768 467 aa15.76■□□□□ 0.11
TRAPPC13-209ENST00000508304 PDCD7Q8N8D1 485 aaKnown RBP15.74■□□□□ 0.11
TRAPPC13-209ENST00000508304 CIZ1Q9ULV3 898 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC13-209ENST00000508304 GOLGA2Q08379 1002 aa15.71■□□□□ 0.11
TRAPPC13-209ENST00000508304 MKRN3Q13064 507 aaKnown RBP15.71■□□□□ 0.11
TRAPPC13-209ENST00000508304 PDAP1Q13442 181 aaKnown RBP15.69■□□□□ 0.1
TRAPPC13-209ENST00000508304 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.67■□□□□ 0.1
TRAPPC13-209ENST00000508304 ST18O60284 1047 aa15.65■□□□□ 0.1
TRAPPC13-209ENST00000508304 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.63■□□□□ 0.09
TRAPPC13-209ENST00000508304 ILDR1Q86SU0 546 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC13-209ENST00000508304 L3MBTL3Q96JM7 780 aaPredicted RBP15.6■□□□□ 0.09
TRAPPC13-209ENST00000508304 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
TRAPPC13-209ENST00000508304 CABP2Q9NPB3 220 aa15.56■□□□□ 0.08
TRAPPC13-209ENST00000508304 C3orf67Q6ZVT6 689 aa15.55■□□□□ 0.08
TRAPPC13-209ENST00000508304 SNPHO15079 494 aa15.54■□□□□ 0.08
TRAPPC13-209ENST00000508304 CDAN1Q8IWY9 1227 aa15.53■□□□□ 0.08
TRAPPC13-209ENST00000508304 TMEM121BQ9BXQ6 578 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC13-209ENST00000508304 DPY19L2Q6NUT2 758 aa15.49■□□□□ 0.07
TRAPPC13-209ENST00000508304 BOLA1Q9Y3E2 137 aa15.41■□□□□ 0.06
TRAPPC13-209ENST00000508304 EFCAB3Q8N7B9 438 aa15.38■□□□□ 0.05
TRAPPC13-209ENST00000508304 MARVELD3Q96A59 401 aa15.37■□□□□ 0.05
TRAPPC13-209ENST00000508304 RNF25Q96BH1 459 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC13-209ENST00000508304 G3V3G9 751 aa15.35■□□□□ 0.05
TRAPPC13-209ENST00000508304 RIOK3O14730 519 aaKnown RBP15.35■□□□□ 0.05
TRAPPC13-209ENST00000508304 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC13-209ENST00000508304 VGFO15240 615 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC13-209ENST00000508304 ZFP91Q96JP5 570 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC13-209ENST00000508304 EMP3P54852 163 aa15.26■□□□□ 0.03
TRAPPC13-209ENST00000508304 SOX12O15370 315 aa15.24■□□□□ 0.03
TRAPPC13-209ENST00000508304 HOXB3P14651 431 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC13-209ENST00000508304 MS4A4AQ96JQ5 239 aa15.2■□□□□ 0.02
TRAPPC13-209ENST00000508304 POTEB3A0JP26 581 aa15.19■□□□□ 0.02
TRAPPC13-209ENST00000508304 POTEBQ6S5H4 581 aa15.19■□□□□ 0.02
TRAPPC13-209ENST00000508304 MICALL2Q8IY33 904 aa15.19■□□□□ 0.02
TRAPPC13-209ENST00000508304 HS3ST6Q96QI5 342 aa15.18■□□□□ 0.02
TRAPPC13-209ENST00000508304 SPNS2Q8IVW8 549 aa15.17■□□□□ 0.02
TRAPPC13-209ENST00000508304 PHF8Q9UPP1 1060 aa15.17■□□□□ 0.02
TRAPPC13-209ENST00000508304 FAM205CA6NFA0 338 aa15.16■□□□□ 0.02
TRAPPC13-209ENST00000508304 TMEM92Q6UXU6 159 aa15.14■□□□□ 0.01
TRAPPC13-209ENST00000508304 HOXB1P14653 301 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC13-209ENST00000508304 MMRN1Q13201 1228 aa15.12■□□□□ 0.01
TRAPPC13-209ENST00000508304 DOK7Q18PE1 504 aa15.12■□□□□ 0.01
TRAPPC13-209ENST00000508304 ZNF710Q8N1W2 664 aa15.11■□□□□ 0.01
TRAPPC13-209ENST00000508304 KRTAP3-3Q9BYR6 98 aa15.1■□□□□ 0.01
TRAPPC13-209ENST00000508304 KRTAP3-2Q9BYR7 98 aa15.1■□□□□ 0.01
TRAPPC13-209ENST00000508304 TAOK2Q9UL54 1235 aa15.1■□□□□ 0.01
TRAPPC13-209ENST00000508304 BCL11BQ9C0K0 894 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC13-209ENST00000508304 NLRP6P59044 892 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms