RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 CLCN6P51797 869 aa4.75□□□□□ -1.65
SMN2-208ENST00000508258 RASEFQ8IZ41 740 aa4.75□□□□□ -1.65
SMN2-208ENST00000508258 GALR2O43603 387 aaPredicted RBP4.73□□□□□ -1.65
SMN2-208ENST00000508258 FAM212AQ96EL1 285 aa4.73□□□□□ -1.65
SMN2-208ENST00000508258 DCAF8Q5TAQ9 597 aa4.71□□□□□ -1.66
SMN2-208ENST00000508258 CCDC61Q9Y6R9 512 aa4.71□□□□□ -1.66
SMN2-208ENST00000508258 NUBP1P53384 320 aa4.7□□□□□ -1.66
SMN2-208ENST00000508258 MS4A3Q96HJ5 214 aa4.7□□□□□ -1.66
SMN2-208ENST00000508258 MAP3K13O43283 966 aa4.68□□□□□ -1.66
SMN2-208ENST00000508258 POTEIP0CG38 1075 aa4.68□□□□□ -1.66
SMN2-208ENST00000508258 KIF12Q96FN5 646 aa4.68□□□□□ -1.66
SMN2-208ENST00000508258 SLC24A1O60721 1099 aa4.67□□□□□ -1.66
SMN2-208ENST00000508258 PCDHB13Q9Y5F0 798 aa4.67□□□□□ -1.66
SMN2-208ENST00000508258 PYGBP11216 843 aa4.66□□□□□ -1.66
SMN2-208ENST00000508258 IFNLR1Q8IU57 520 aaPredicted RBP4.66□□□□□ -1.66
SMN2-208ENST00000508258 SPOCK2Q92563 424 aa4.66□□□□□ -1.66
SMN2-208ENST00000508258 CIZ1Q9ULV3 898 aaPredicted RBP4.66□□□□□ -1.66
SMN2-208ENST00000508258 GSE1Q14687 1217 aa4.65□□□□□ -1.67
SMN2-208ENST00000508258 LHX8Q68G74 356 aa4.64□□□□□ -1.67
SMN2-208ENST00000508258 ATMINO43313 823 aaPredicted RBP4.62□□□□□ -1.67
SMN2-208ENST00000508258 IFNL1Q8IU54 200 aa4.62□□□□□ -1.67
SMN2-208ENST00000508258 TRPC6Q9Y210 931 aa4.62□□□□□ -1.67
SMN2-208ENST00000508258 ATN1P54259 1190 aaPredicted RBP4.61□□□□□ -1.67
SMN2-208ENST00000508258 ASTLQ6HA08 431 aaPredicted RBP4.61□□□□□ -1.67
SMN2-208ENST00000508258 PELP1Q8IZL8 1130 aaKnown RBP4.61□□□□□ -1.67
SMN2-208ENST00000508258 SGIP1Q9BQI5 828 aa4.61□□□□□ -1.67
SMN2-208ENST00000508258 BMP2KQ9NSY1 1161 aaPredicted RBP4.61□□□□□ -1.67
SMN2-208ENST00000508258 TIE1P35590 1138 aa4.6□□□□□ -1.67
SMN2-208ENST00000508258 SLC39A7Q92504 469 aa4.6□□□□□ -1.67
SMN2-208ENST00000508258 TMEM106CQ9BVX2 250 aa4.6□□□□□ -1.67
SMN2-208ENST00000508258 METRNQ9UJH8 293 aa4.6□□□□□ -1.67
SMN2-208ENST00000508258 PCDHB8Q9UN66 801 aa4.6□□□□□ -1.67
SMN2-208ENST00000508258 TTLL13PA6NNM8 815 aa4.59□□□□□ -1.67
SMN2-208ENST00000508258 SEC24BO95487 1268 aa4.59□□□□□ -1.67
SMN2-208ENST00000508258 C7P10643 843 aa4.59□□□□□ -1.67
SMN2-208ENST00000508258 ZNF467Q7Z7K2 595 aaPredicted RBP4.58□□□□□ -1.68
SMN2-208ENST00000508258 TRIM35Q9UPQ4 493 aa4.58□□□□□ -1.68
SMN2-208ENST00000508258 GOLGA2Q08379 1002 aa4.57□□□□□ -1.68
SMN2-208ENST00000508258 CHRM1P11229 460 aaPredicted RBP4.54□□□□□ -1.68
SMN2-208ENST00000508258 POTEB2H3BUK9 544 aa4.53□□□□□ -1.68
SMN2-208ENST00000508258 PLCG2P16885 1265 aa4.53□□□□□ -1.68
SMN2-208ENST00000508258 PSEN1P49768 467 aa4.53□□□□□ -1.68
SMN2-208ENST00000508258 TRIM41Q8WV44 630 aa4.53□□□□□ -1.68
SMN2-208ENST00000508258 MKRN3Q13064 507 aaKnown RBP4.52□□□□□ -1.69
SMN2-208ENST00000508258 PDAP1Q13442 181 aaKnown RBP4.52□□□□□ -1.69
SMN2-208ENST00000508258 IER5LQ5T953 404 aa4.52□□□□□ -1.69
SMN2-208ENST00000508258 COLQQ9Y215 455 aaPredicted RBP4.52□□□□□ -1.69
SMN2-208ENST00000508258 MAMSTRQ6ZN01 415 aa4.51□□□□□ -1.69
SMN2-208ENST00000508258 SCUBE2Q9NQ36 999 aa4.51□□□□□ -1.69
SMN2-208ENST00000508258 OTUD5Q96G74 571 aa4.5□□□□□ -1.69
SMN2-208ENST00000508258 CABP2Q9NPB3 220 aa4.5□□□□□ -1.69
SMN2-208ENST00000508258 POTEFA5A3E0 1075 aa4.49□□□□□ -1.69
SMN2-208ENST00000508258 ECM2O94769 699 aaPredicted RBP4.49□□□□□ -1.69
SMN2-208ENST00000508258 RIOK3O14730 519 aaKnown RBP4.48□□□□□ -1.69
SMN2-208ENST00000508258 POTEJP0CG39 1038 aa4.48□□□□□ -1.69
SMN2-208ENST00000508258 OCEL1Q9H607 264 aa4.48□□□□□ -1.69
SMN2-208ENST00000508258 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.48□□□□□ -1.69
SMN2-208ENST00000508258 IRX5P78411 483 aaPredicted RBP4.47□□□□□ -1.69
SMN2-208ENST00000508258 G3V3G9 751 aa4.46□□□□□ -1.7
SMN2-208ENST00000508258 VGFO15240 615 aaPredicted RBP4.46□□□□□ -1.7
SMN2-208ENST00000508258 RNF25Q96BH1 459 aaPredicted RBP4.46□□□□□ -1.7
SMN2-208ENST00000508258 TAOK2Q9UL54 1235 aa4.46□□□□□ -1.7
SMN2-208ENST00000508258 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.45□□□□□ -1.7
SMN2-208ENST00000508258 EFCAB3Q8N7B9 438 aa4.45□□□□□ -1.7
SMN2-208ENST00000508258 ZFP91Q96JP5 570 aaPredicted RBP4.45□□□□□ -1.7
SMN2-208ENST00000508258 PKD2Q13563 968 aa4.44□□□□□ -1.7
SMN2-208ENST00000508258 C3orf67Q6ZVT6 689 aa4.44□□□□□ -1.7
SMN2-208ENST00000508258 SLAIN1Q8ND83 568 aa4.44□□□□□ -1.7
SMN2-208ENST00000508258 L3MBTL3Q96JM7 780 aaPredicted RBP4.43□□□□□ -1.7
SMN2-208ENST00000508258 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.43□□□□□ -1.7
SMN2-208ENST00000508258 STK24Q9Y6E0 443 aa4.43□□□□□ -1.7
SMN2-208ENST00000508258 STK25O00506 426 aa4.42□□□□□ -1.7
SMN2-208ENST00000508258 RGL2O15211 777 aa4.42□□□□□ -1.7
SMN2-208ENST00000508258 DPY19L2Q6NUT2 758 aa4.42□□□□□ -1.7
SMN2-208ENST00000508258 PDCD7Q8N8D1 485 aaKnown RBP4.42□□□□□ -1.7
SMN2-208ENST00000508258 FAM163AQ96GL9 167 aaPredicted RBP4.42□□□□□ -1.7
SMN2-208ENST00000508258 BCL11BQ9C0K0 894 aaPredicted RBP4.42□□□□□ -1.7
SMN2-208ENST00000508258 PLCB2Q00722 1185 aa4.4□□□□□ -1.71
SMN2-208ENST00000508258 BOLA1Q9Y3E2 137 aa4.4□□□□□ -1.71
SMN2-208ENST00000508258 SOX12O15370 315 aa4.39□□□□□ -1.71
SMN2-208ENST00000508258 DCAF8L2P0C7V8 631 aa4.39□□□□□ -1.71
SMN2-208ENST00000508258 PHF8Q9UPP1 1060 aa4.38□□□□□ -1.71
SMN2-208ENST00000508258 POTEMA6NI47 508 aa4.37□□□□□ -1.71
SMN2-208ENST00000508258 NLRP6P59044 892 aa4.37□□□□□ -1.71
SMN2-208ENST00000508258 POTEGQ6S5H5 508 aa4.37□□□□□ -1.71
SMN2-208ENST00000508258 CHGAP10645 457 aaKnown RBP4.36□□□□□ -1.71
SMN2-208ENST00000508258 ILDR1Q86SU0 546 aaPredicted RBP4.36□□□□□ -1.71
SMN2-208ENST00000508258 SNPHO15079 494 aa4.35□□□□□ -1.71
SMN2-208ENST00000508258 MICALL2Q8IY33 904 aa4.34□□□□□ -1.71
SMN2-208ENST00000508258 MS4A4AQ96JQ5 239 aa4.34□□□□□ -1.71
SMN2-208ENST00000508258 ST18O60284 1047 aa4.33□□□□□ -1.72
SMN2-208ENST00000508258 MFRPQ9BY79 579 aa4.33□□□□□ -1.72
SMN2-208ENST00000508258 ZNF710Q8N1W2 664 aa4.32□□□□□ -1.72
SMN2-208ENST00000508258 LCE2DQ5TA82 110 aaPredicted RBP4.31□□□□□ -1.72
SMN2-208ENST00000508258 HS6ST3Q8IZP7 471 aa4.31□□□□□ -1.72
SMN2-208ENST00000508258 FBXO22Q8NEZ5 403 aa4.31□□□□□ -1.72
SMN2-208ENST00000508258 MARVELD3Q96A59 401 aa4.31□□□□□ -1.72
SMN2-208ENST00000508258 TMEM121BQ9BXQ6 578 aaPredicted RBP4.31□□□□□ -1.72
SMN2-208ENST00000508258 PLSCR2Q9NRY7 297 aa4.31□□□□□ -1.72
SMN2-208ENST00000508258 RIMBP2O15034 1052 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms