RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 RASEFQ8IZ41 740 aa13.21□□□□□ -0.29
CLOCK-207ENST00000508049 ZBTB47Q9UFB7 747 aaPredicted RBP13.18□□□□□ -0.3
CLOCK-207ENST00000508049 KIF12Q96FN5 646 aa13.17□□□□□ -0.3
CLOCK-207ENST00000508049 PELP1Q8IZL8 1130 aaKnown RBP13.16□□□□□ -0.3
CLOCK-207ENST00000508049 ASTLQ6HA08 431 aaPredicted RBP13.13□□□□□ -0.31
CLOCK-207ENST00000508049 ATMINO43313 823 aaPredicted RBP13.12□□□□□ -0.31
CLOCK-207ENST00000508049 MAP3K13O43283 966 aa13.11□□□□□ -0.31
CLOCK-207ENST00000508049 FBXO3Q9UK99 471 aa13.1□□□□□ -0.31
CLOCK-207ENST00000508049 NUBP1P53384 320 aa13.09□□□□□ -0.31
CLOCK-207ENST00000508049 POTEB2H3BUK9 544 aa13.06□□□□□ -0.32
CLOCK-207ENST00000508049 SLC39A7Q92504 469 aa13.06□□□□□ -0.32
CLOCK-207ENST00000508049 METRNQ9UJH8 293 aa13.05□□□□□ -0.32
CLOCK-207ENST00000508049 C7P10643 843 aa13.04□□□□□ -0.32
CLOCK-207ENST00000508049 ATN1P54259 1190 aaPredicted RBP13.04□□□□□ -0.32
CLOCK-207ENST00000508049 FAM212AQ96EL1 285 aa13.03□□□□□ -0.32
CLOCK-207ENST00000508049 TRPC6Q9Y210 931 aa13.03□□□□□ -0.32
CLOCK-207ENST00000508049 BMP2KQ9NSY1 1161 aaPredicted RBP13.02□□□□□ -0.33
CLOCK-207ENST00000508049 OTUD5Q96G74 571 aa13.01□□□□□ -0.33
CLOCK-207ENST00000508049 PCDHB13Q9Y5F0 798 aa12.99□□□□□ -0.33
CLOCK-207ENST00000508049 TIE1P35590 1138 aa12.98□□□□□ -0.33
CLOCK-207ENST00000508049 SGIP1Q9BQI5 828 aa12.97□□□□□ -0.33
CLOCK-207ENST00000508049 DCAF8Q5TAQ9 597 aa12.95□□□□□ -0.34
CLOCK-207ENST00000508049 TTLL13PA6NNM8 815 aa12.93□□□□□ -0.34
CLOCK-207ENST00000508049 VASPP50552 380 aaPredicted RBP12.93□□□□□ -0.34
CLOCK-207ENST00000508049 KLHL34Q8N239 644 aa12.92□□□□□ -0.34
CLOCK-207ENST00000508049 IFNL1Q8IU54 200 aa12.91□□□□□ -0.34
CLOCK-207ENST00000508049 POTEJP0CG39 1038 aa12.88□□□□□ -0.35
CLOCK-207ENST00000508049 PYGBP11216 843 aa12.86□□□□□ -0.35
CLOCK-207ENST00000508049 POTEFA5A3E0 1075 aa12.85□□□□□ -0.35
CLOCK-207ENST00000508049 MAMSTRQ6ZN01 415 aa12.85□□□□□ -0.35
CLOCK-207ENST00000508049 TRIM35Q9UPQ4 493 aa12.85□□□□□ -0.35
CLOCK-207ENST00000508049 SEC24BO95487 1268 aa12.83□□□□□ -0.36
CLOCK-207ENST00000508049 TMEM106CQ9BVX2 250 aa12.82□□□□□ -0.36
CLOCK-207ENST00000508049 COLQQ9Y215 455 aaPredicted RBP12.8□□□□□ -0.36
CLOCK-207ENST00000508049 SCUBE2Q9NQ36 999 aa12.79□□□□□ -0.36
CLOCK-207ENST00000508049 GSE1Q14687 1217 aa12.78□□□□□ -0.36
CLOCK-207ENST00000508049 IER5LQ5T953 404 aa12.78□□□□□ -0.36
CLOCK-207ENST00000508049 PCDHB8Q9UN66 801 aa12.76□□□□□ -0.37
CLOCK-207ENST00000508049 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
CLOCK-207ENST00000508049 PLCG2P16885 1265 aa12.68□□□□□ -0.38
CLOCK-207ENST00000508049 SPOCK2Q92563 424 aa12.68□□□□□ -0.38
CLOCK-207ENST00000508049 ZNF467Q7Z7K2 595 aaPredicted RBP12.66□□□□□ -0.38
CLOCK-207ENST00000508049 POTEMA6NI47 508 aa12.65□□□□□ -0.38
CLOCK-207ENST00000508049 CHRM1P11229 460 aaPredicted RBP12.64□□□□□ -0.39
CLOCK-207ENST00000508049 CIZ1Q9ULV3 898 aaPredicted RBP12.64□□□□□ -0.39
CLOCK-207ENST00000508049 IRX5P78411 483 aaPredicted RBP12.63□□□□□ -0.39
CLOCK-207ENST00000508049 POTEGQ6S5H5 508 aa12.62□□□□□ -0.39
CLOCK-207ENST00000508049 FAM163AQ96GL9 167 aaPredicted RBP12.62□□□□□ -0.39
CLOCK-207ENST00000508049 OCEL1Q9H607 264 aa12.6□□□□□ -0.39
CLOCK-207ENST00000508049 GOLGA2Q08379 1002 aa12.57□□□□□ -0.4
CLOCK-207ENST00000508049 PSEN1P49768 467 aa12.56□□□□□ -0.4
CLOCK-207ENST00000508049 SLAIN1Q8ND83 568 aa12.55□□□□□ -0.4
CLOCK-207ENST00000508049 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
CLOCK-207ENST00000508049 MKRN3Q13064 507 aaKnown RBP12.53□□□□□ -0.4
CLOCK-207ENST00000508049 LCE2DQ5TA82 110 aaPredicted RBP12.53□□□□□ -0.4
CLOCK-207ENST00000508049 PDAP1Q13442 181 aaKnown RBP12.51□□□□□ -0.41
CLOCK-207ENST00000508049 PDCD7Q8N8D1 485 aaKnown RBP12.46□□□□□ -0.41
CLOCK-207ENST00000508049 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.45□□□□□ -0.421e-6■■■■□ 25.6
CLOCK-207ENST00000508049 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.44□□□□□ -0.42
CLOCK-207ENST00000508049 CABP2Q9NPB3 220 aa12.42□□□□□ -0.42
CLOCK-207ENST00000508049 PCDH10Q9P2E7 1040 aa12.42□□□□□ -0.42
CLOCK-207ENST00000508049 TRIM41Q8WV44 630 aa12.41□□□□□ -0.42
CLOCK-207ENST00000508049 L3MBTL3Q96JM7 780 aaPredicted RBP12.4□□□□□ -0.42
CLOCK-207ENST00000508049 C3orf67Q6ZVT6 689 aa12.37□□□□□ -0.43
CLOCK-207ENST00000508049 ST18O60284 1047 aa12.36□□□□□ -0.43
CLOCK-207ENST00000508049 ILDR1Q86SU0 546 aaPredicted RBP12.33□□□□□ -0.44
CLOCK-207ENST00000508049 SNPHO15079 494 aa12.32□□□□□ -0.44
CLOCK-207ENST00000508049 DPY19L2Q6NUT2 758 aa12.32□□□□□ -0.44
CLOCK-207ENST00000508049 G3V3G9 751 aa12.28□□□□□ -0.44
CLOCK-207ENST00000508049 EFCAB3Q8N7B9 438 aa12.27□□□□□ -0.45
CLOCK-207ENST00000508049 RIOK3O14730 519 aaKnown RBP12.26□□□□□ -0.45
CLOCK-207ENST00000508049 CDAN1Q8IWY9 1227 aa12.26□□□□□ -0.45
CLOCK-207ENST00000508049 BOLA1Q9Y3E2 137 aa12.25□□□□□ -0.45
CLOCK-207ENST00000508049 RNF25Q96BH1 459 aaPredicted RBP12.24□□□□□ -0.45
CLOCK-207ENST00000508049 TMEM121BQ9BXQ6 578 aaPredicted RBP12.23□□□□□ -0.45
CLOCK-207ENST00000508049 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.2□□□□□ -0.46
CLOCK-207ENST00000508049 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
CLOCK-207ENST00000508049 ZFP91Q96JP5 570 aaPredicted RBP12.2□□□□□ -0.46
CLOCK-207ENST00000508049 MARVELD3Q96A59 401 aa12.19□□□□□ -0.46
CLOCK-207ENST00000508049 SOX12O15370 315 aa12.14□□□□□ -0.47
CLOCK-207ENST00000508049 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
CLOCK-207ENST00000508049 EMP3P54852 163 aa12.1□□□□□ -0.47
CLOCK-207ENST00000508049 PHF8Q9UPP1 1060 aa12.09□□□□□ -0.47
CLOCK-207ENST00000508049 ECM2O94769 699 aaPredicted RBP12.08□□□□□ -0.48
CLOCK-207ENST00000508049 MICALL2Q8IY33 904 aa12.07□□□□□ -0.48
CLOCK-207ENST00000508049 MS4A4AQ96JQ5 239 aa12.07□□□□□ -0.48
CLOCK-207ENST00000508049 BCL11BQ9C0K0 894 aaPredicted RBP12.07□□□□□ -0.48
CLOCK-207ENST00000508049 HOXB3P14651 431 aaPredicted RBP12.05□□□□□ -0.48
CLOCK-207ENST00000508049 STK24Q9Y6E0 443 aa12.05□□□□□ -0.48
CLOCK-207ENST00000508049 ZNF710Q8N1W2 664 aa12.03□□□□□ -0.48
CLOCK-207ENST00000508049 FAM205CA6NFA0 338 aa12.02□□□□□ -0.49
CLOCK-207ENST00000508049 NLRP6P59044 892 aa12.02□□□□□ -0.49
CLOCK-207ENST00000508049 STK25O00506 426 aa12.01□□□□□ -0.49
CLOCK-207ENST00000508049 DOK7Q18PE1 504 aa12.01□□□□□ -0.49
CLOCK-207ENST00000508049 HS3ST6Q96QI5 342 aa12.01□□□□□ -0.49
CLOCK-207ENST00000508049 PKD2Q13563 968 aa12□□□□□ -0.49
CLOCK-207ENST00000508049 TMEM92Q6UXU6 159 aa12□□□□□ -0.49
CLOCK-207ENST00000508049 POTEB3A0JP26 581 aa11.98□□□□□ -0.49
CLOCK-207ENST00000508049 POTEBQ6S5H4 581 aa11.98□□□□□ -0.49
CLOCK-207ENST00000508049 RGL2O15211 777 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms