RNA–Protein interactions for RNA: ENST00000507860.1

MATR3-212, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-212ENST00000507860 RNF25Q96BH1 459 aaPredicted RBP13.5□□□□□ -0.25
MATR3-212ENST00000507860 CREBZFQ9NS37 354 aa13.5□□□□□ -0.25
MATR3-212ENST00000507860 PRR29P0C7W0 189 aa13.49□□□□□ -0.25
MATR3-212ENST00000507860 DCAF8Q5TAQ9 597 aa13.49□□□□□ -0.25
MATR3-212ENST00000507860 TSHZ2Q9NRE2 1034 aa13.49□□□□□ -0.25
MATR3-212ENST00000507860 REM2Q8IYK8 340 aaPredicted RBP13.48□□□□□ -0.25
MATR3-212ENST00000507860 MNX1P50219 401 aaPredicted RBP13.46□□□□□ -0.25
MATR3-212ENST00000507860 DNAJC5Q9H3Z4 198 aa13.43□□□□□ -0.26
MATR3-212ENST00000507860 RIOK3O14730 519 aaKnown RBP13.4□□□□□ -0.26
MATR3-212ENST00000507860 FAM212AQ96EL1 285 aa13.4□□□□□ -0.26
MATR3-212ENST00000507860 TAOK2Q9UL54 1235 aa13.38□□□□□ -0.27
MATR3-212ENST00000507860 RASEFQ8IZ41 740 aa13.36□□□□□ -0.27
MATR3-212ENST00000507860 CHRM1P11229 460 aaPredicted RBP13.35□□□□□ -0.27
MATR3-212ENST00000507860 PRKCSHP14314 528 aaPredicted RBP13.34□□□□□ -0.27
MATR3-212ENST00000507860 NKX1-1Q15270 411 aaPredicted RBP13.33□□□□□ -0.28
MATR3-212ENST00000507860 PITPNM1O00562 1244 aa13.31□□□□□ -0.28
MATR3-212ENST00000507860 VGFO15240 615 aaPredicted RBP13.31□□□□□ -0.28
MATR3-212ENST00000507860 STK25O00506 426 aa13.27□□□□□ -0.29
MATR3-212ENST00000507860 GTPBP6O43824 516 aaPredicted RBP13.26□□□□□ -0.29
MATR3-212ENST00000507860 SGIP1Q9BQI5 828 aa13.26□□□□□ -0.29
MATR3-212ENST00000507860 PYGBP11216 843 aa13.22□□□□□ -0.29
MATR3-212ENST00000507860 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.2□□□□□ -0.3
MATR3-212ENST00000507860 ZFP91Q96JP5 570 aaPredicted RBP13.2□□□□□ -0.3
MATR3-212ENST00000507860 TPRNQ4KMQ1 711 aa13.18□□□□□ -0.3
MATR3-212ENST00000507860 BCL11BQ9C0K0 894 aaPredicted RBP13.18□□□□□ -0.3
MATR3-212ENST00000507860 CHRDL2Q6WN34 429 aa13.17□□□□□ -0.3
MATR3-212ENST00000507860 STK24Q9Y6E0 443 aa13.17□□□□□ -0.3
MATR3-212ENST00000507860 CHADLQ6NUI6 762 aa13.13□□□□□ -0.31
MATR3-212ENST00000507860 NBR1Q14596 966 aa13.09□□□□□ -0.31
MATR3-212ENST00000507860 RYDENQ9NUL5 291 aaKnown RBP13.09□□□□□ -0.31
MATR3-212ENST00000507860 TSPYL2Q9H2G4 693 aaPredicted RBP13.08□□□□□ -0.32
MATR3-212ENST00000507860 FARP1Q9Y4F1 1045 aaPredicted RBP13.08□□□□□ -0.32
MATR3-212ENST00000507860 ZNF467Q7Z7K2 595 aaPredicted RBP13.04□□□□□ -0.32
MATR3-212ENST00000507860 PRKAR2AP13861 404 aaKnown RBP12.98□□□□□ -0.33
MATR3-212ENST00000507860 PDAP1Q13442 181 aaKnown RBP12.98□□□□□ -0.33
MATR3-212ENST00000507860 PCDHB8Q9UN66 801 aa12.97□□□□□ -0.33
MATR3-212ENST00000507860 PCDHB13Q9Y5F0 798 aa12.97□□□□□ -0.33
MATR3-212ENST00000507860 CCDC61Q9Y6R9 512 aa12.97□□□□□ -0.33
MATR3-212ENST00000507860 FXR2P51116 673 aaKnown RBP eCLIP12.93□□□□□ -0.346e-6■■■■□ 22.2
MATR3-212ENST00000507860 ZNF579Q8NAF0 562 aaKnown RBP12.92□□□□□ -0.34
MATR3-212ENST00000507860 PSEN1P49768 467 aa12.9□□□□□ -0.34
MATR3-212ENST00000507860 CADPS2Q86UW7 1296 aa12.86□□□□□ -0.35
MATR3-212ENST00000507860 MFRPQ9BY79 579 aa12.85□□□□□ -0.35
MATR3-212ENST00000507860 PAK3O75914 559 aaPredicted RBP12.83□□□□□ -0.36
MATR3-212ENST00000507860 IFNL1Q8IU54 200 aa12.83□□□□□ -0.36
MATR3-212ENST00000507860 PIP4P2Q8N4L2 257 aa12.83□□□□□ -0.36
MATR3-212ENST00000507860 SP7Q8TDD2 431 aaPredicted RBP12.83□□□□□ -0.36
MATR3-212ENST00000507860 P3H3Q8IVL6 736 aa12.81□□□□□ -0.36
MATR3-212ENST00000507860 MAP3K13O43283 966 aa12.8□□□□□ -0.36
MATR3-212ENST00000507860 KIF12Q96FN5 646 aa12.8□□□□□ -0.36
MATR3-212ENST00000507860 WDR70Q9NW82 654 aa12.79□□□□□ -0.36
MATR3-212ENST00000507860 EFCAB3Q8N7B9 438 aa12.75□□□□□ -0.37
MATR3-212ENST00000507860 PPP1R37O75864 691 aa12.74□□□□□ -0.37
MATR3-212ENST00000507860 FBXO22Q8NEZ5 403 aa12.74□□□□□ -0.37
MATR3-212ENST00000507860 KCNV2Q8TDN2 545 aa12.74□□□□□ -0.37
MATR3-212ENST00000507860 SOX12O15370 315 aa12.73□□□□□ -0.37
MATR3-212ENST00000507860 CABP2Q9NPB3 220 aa12.73□□□□□ -0.37
MATR3-212ENST00000507860 NLRP6P59044 892 aa12.72□□□□□ -0.37
MATR3-212ENST00000507860 PHF8Q9UPP1 1060 aa12.7□□□□□ -0.38
MATR3-212ENST00000507860 ZRANB1Q9UGI0 708 aa12.68□□□□□ -0.38
MATR3-212ENST00000507860 CD44P16070 742 aaKnown RBP12.64□□□□□ -0.39
MATR3-212ENST00000507860 HAX1O00165 279 aa12.63□□□□□ -0.39
MATR3-212ENST00000507860 PHF12Q96QT6 1004 aa12.63□□□□□ -0.39
MATR3-212ENST00000507860 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.39
MATR3-212ENST00000507860 ARHGEF1Q92888 912 aaKnown RBP12.6□□□□□ -0.39
MATR3-212ENST00000507860 E2F4Q16254 413 aa12.58□□□□□ -0.4
MATR3-212ENST00000507860 LMOD2Q6P5Q4 547 aa12.58□□□□□ -0.4
MATR3-212ENST00000507860 MS4A4AQ96JQ5 239 aa12.58□□□□□ -0.4
MATR3-212ENST00000507860 NCKAP5LQ9HCH0 1330 aa12.55□□□□□ -0.4
MATR3-212ENST00000507860 TMEM106CQ9BVX2 250 aa12.54□□□□□ -0.4
MATR3-212ENST00000507860 EVX2Q03828 476 aa12.53□□□□□ -0.4
MATR3-212ENST00000507860 PDE4AP27815 886 aa12.51□□□□□ -0.41
MATR3-212ENST00000507860 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
MATR3-212ENST00000507860 TRPC6Q9Y210 931 aa12.51□□□□□ -0.41
MATR3-212ENST00000507860 MS4A3Q96HJ5 214 aa12.5□□□□□ -0.41
MATR3-212ENST00000507860 LARP6Q9BRS8 491 aaKnown RBP12.5□□□□□ -0.41
MATR3-212ENST00000507860 TULP1O00294 542 aaPredicted RBP12.49□□□□□ -0.41
MATR3-212ENST00000507860 MFSD10Q14728 455 aa12.48□□□□□ -0.41
MATR3-212ENST00000507860 C19orf67A6NJJ6 358 aa12.47□□□□□ -0.41
MATR3-212ENST00000507860 CRISPLD2Q9H0B8 497 aa12.47□□□□□ -0.41
MATR3-212ENST00000507860 MKRN3Q13064 507 aaKnown RBP12.46□□□□□ -0.41
MATR3-212ENST00000507860 TESPA1A2RU30 521 aaPredicted RBP12.45□□□□□ -0.42
MATR3-212ENST00000507860 SEMA3EO15041 775 aa12.45□□□□□ -0.42
MATR3-212ENST00000507860 DDX27Q96GQ7 796 aaKnown RBP12.42□□□□□ -0.42
MATR3-212ENST00000507860 TIE1P35590 1138 aa12.41□□□□□ -0.42
MATR3-212ENST00000507860 ZC3H15Q8WU90 426 aaKnown RBP12.4□□□□□ -0.42
MATR3-212ENST00000507860 ARIH1Q9Y4X5 557 aaPredicted RBP12.4□□□□□ -0.42
MATR3-212ENST00000507860 ILDR1Q86SU0 546 aaPredicted RBP12.39□□□□□ -0.43
MATR3-212ENST00000507860 TTLL13PA6NNM8 815 aa12.38□□□□□ -0.43
MATR3-212ENST00000507860 CAMK2BQ13554 666 aa12.38□□□□□ -0.43
MATR3-212ENST00000507860 TMEM132AQ24JP5 1023 aa12.38□□□□□ -0.43
MATR3-212ENST00000507860 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.35□□□□□ -0.43
MATR3-212ENST00000507860 GTF3C3Q9Y5Q9 886 aa12.35□□□□□ -0.43
MATR3-212ENST00000507860 BMP2KQ9NSY1 1161 aaPredicted RBP12.34□□□□□ -0.43
MATR3-212ENST00000507860 SMYD5Q6GMV2 418 aa12.33□□□□□ -0.44
MATR3-212ENST00000507860 GPHNQ9NQX3 736 aaPredicted RBP12.31□□□□□ -0.44
MATR3-212ENST00000507860 PPP1R15BQ5SWA1 713 aa12.29□□□□□ -0.44
MATR3-212ENST00000507860 TRIM35Q9UPQ4 493 aa12.29□□□□□ -0.44
MATR3-212ENST00000507860 BRPF1P55201 1214 aaPredicted RBP12.28□□□□□ -0.44
MATR3-212ENST00000507860 GALR2O43603 387 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms