RNA–Protein interactions for RNA: ENST00000507761.1

LINC01088-204, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 842 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-204ENST00000507761 RASEFQ8IZ41 740 aa12.93□□□□□ -0.34
LINC01088-204ENST00000507761 MS4A3Q96HJ5 214 aa12.88□□□□□ -0.35
LINC01088-204ENST00000507761 NUBP1P53384 320 aa12.87□□□□□ -0.35
LINC01088-204ENST00000507761 LHX8Q68G74 356 aa12.85□□□□□ -0.35
LINC01088-204ENST00000507761 KIF12Q96FN5 646 aa12.85□□□□□ -0.35
LINC01088-204ENST00000507761 VASPP50552 380 aaPredicted RBP12.83□□□□□ -0.36
LINC01088-204ENST00000507761 FAM212AQ96EL1 285 aa12.8□□□□□ -0.36
LINC01088-204ENST00000507761 MAP3K13O43283 966 aa12.78□□□□□ -0.36
LINC01088-204ENST00000507761 ASTLQ6HA08 431 aaPredicted RBP12.75□□□□□ -0.37
LINC01088-204ENST00000507761 KLHL34Q8N239 644 aa12.75□□□□□ -0.37
LINC01088-204ENST00000507761 ATMINO43313 823 aaPredicted RBP12.73□□□□□ -0.37
LINC01088-204ENST00000507761 PELP1Q8IZL8 1130 aaKnown RBP12.72□□□□□ -0.37
LINC01088-204ENST00000507761 DCAF8Q5TAQ9 597 aa12.71□□□□□ -0.37
LINC01088-204ENST00000507761 SGIP1Q9BQI5 828 aa12.71□□□□□ -0.37
LINC01088-204ENST00000507761 PCDHB13Q9Y5F0 798 aa12.69□□□□□ -0.38
LINC01088-204ENST00000507761 TRPC6Q9Y210 931 aa12.67□□□□□ -0.38
LINC01088-204ENST00000507761 TIE1P35590 1138 aa12.66□□□□□ -0.38
LINC01088-204ENST00000507761 ATN1P54259 1190 aaPredicted RBP12.65□□□□□ -0.38
LINC01088-204ENST00000507761 SLC39A7Q92504 469 aa12.65□□□□□ -0.38
LINC01088-204ENST00000507761 BMP2KQ9NSY1 1161 aaPredicted RBP12.65□□□□□ -0.38
LINC01088-204ENST00000507761 C7P10643 843 aa12.63□□□□□ -0.39
LINC01088-204ENST00000507761 METRNQ9UJH8 293 aa12.63□□□□□ -0.39
LINC01088-204ENST00000507761 GSE1Q14687 1217 aa12.61□□□□□ -0.39
LINC01088-204ENST00000507761 IFNL1Q8IU54 200 aa12.61□□□□□ -0.39
LINC01088-204ENST00000507761 IFNLR1Q8IU57 520 aaPredicted RBP12.61□□□□□ -0.39
LINC01088-204ENST00000507761 PYGBP11216 843 aa12.6□□□□□ -0.39
LINC01088-204ENST00000507761 TTLL13PA6NNM8 815 aa12.58□□□□□ -0.4
LINC01088-204ENST00000507761 POTEB2H3BUK9 544 aa12.57□□□□□ -0.4
LINC01088-204ENST00000507761 SPOCK2Q92563 424 aa12.57□□□□□ -0.4
LINC01088-204ENST00000507761 TMEM106CQ9BVX2 250 aa12.5□□□□□ -0.41
LINC01088-204ENST00000507761 TRIM35Q9UPQ4 493 aa12.5□□□□□ -0.41
LINC01088-204ENST00000507761 OTUD5Q96G74 571 aa12.49□□□□□ -0.41
LINC01088-204ENST00000507761 CHRM1P11229 460 aaPredicted RBP12.48□□□□□ -0.41
LINC01088-204ENST00000507761 PCDHB8Q9UN66 801 aa12.48□□□□□ -0.41
LINC01088-204ENST00000507761 IER5LQ5T953 404 aa12.46□□□□□ -0.41
LINC01088-204ENST00000507761 CIZ1Q9ULV3 898 aaPredicted RBP12.46□□□□□ -0.41
LINC01088-204ENST00000507761 POTEFA5A3E0 1075 aa12.45□□□□□ -0.42
LINC01088-204ENST00000507761 ZNF467Q7Z7K2 595 aaPredicted RBP12.45□□□□□ -0.42
LINC01088-204ENST00000507761 SEC24BO95487 1268 aa12.44□□□□□ -0.42
LINC01088-204ENST00000507761 POTEJP0CG39 1038 aa12.42□□□□□ -0.42
LINC01088-204ENST00000507761 MAMSTRQ6ZN01 415 aa12.42□□□□□ -0.42
LINC01088-204ENST00000507761 COLQQ9Y215 455 aaPredicted RBP12.41□□□□□ -0.42
LINC01088-204ENST00000507761 SCUBE2Q9NQ36 999 aa12.36□□□□□ -0.43
LINC01088-204ENST00000507761 TRIM41Q8WV44 630 aa12.33□□□□□ -0.44
LINC01088-204ENST00000507761 PLCG2P16885 1265 aa12.32□□□□□ -0.44
LINC01088-204ENST00000507761 PSEN1P49768 467 aa12.32□□□□□ -0.44
LINC01088-204ENST00000507761 IRX5P78411 483 aaPredicted RBP12.31□□□□□ -0.44
LINC01088-204ENST00000507761 GOLGA2Q08379 1002 aa12.29□□□□□ -0.44
LINC01088-204ENST00000507761 PDAP1Q13442 181 aaKnown RBP12.29□□□□□ -0.44
LINC01088-204ENST00000507761 OCEL1Q9H607 264 aa12.28□□□□□ -0.44
LINC01088-204ENST00000507761 MKRN3Q13064 507 aaKnown RBP12.25□□□□□ -0.45
LINC01088-204ENST00000507761 PDCD7Q8N8D1 485 aaKnown RBP12.17□□□□□ -0.46
LINC01088-204ENST00000507761 CABP2Q9NPB3 220 aa12.17□□□□□ -0.46
LINC01088-204ENST00000507761 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.16□□□□□ -0.46
LINC01088-204ENST00000507761 RIOK3O14730 519 aaKnown RBP12.14□□□□□ -0.47
LINC01088-204ENST00000507761 SLAIN1Q8ND83 568 aa12.13□□□□□ -0.47
LINC01088-204ENST00000507761 RNF25Q96BH1 459 aaPredicted RBP12.11□□□□□ -0.47
LINC01088-204ENST00000507761 ILDR1Q86SU0 546 aaPredicted RBP12.1□□□□□ -0.47
LINC01088-204ENST00000507761 FAM163AQ96GL9 167 aaPredicted RBP12.1□□□□□ -0.47
LINC01088-204ENST00000507761 L3MBTL3Q96JM7 780 aaPredicted RBP12.1□□□□□ -0.47
LINC01088-204ENST00000507761 VGFO15240 615 aaPredicted RBP12.08□□□□□ -0.48
LINC01088-204ENST00000507761 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.08□□□□□ -0.48
LINC01088-204ENST00000507761 POTEMA6NI47 508 aa12.07□□□□□ -0.48
LINC01088-204ENST00000507761 POTEGQ6S5H5 508 aa12.05□□□□□ -0.48
LINC01088-204ENST00000507761 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.04□□□□□ -0.48
LINC01088-204ENST00000507761 LCE2DQ5TA82 110 aaPredicted RBP12.04□□□□□ -0.48
LINC01088-204ENST00000507761 C3orf67Q6ZVT6 689 aa12.04□□□□□ -0.48
LINC01088-204ENST00000507761 EFCAB3Q8N7B9 438 aa12.04□□□□□ -0.48
LINC01088-204ENST00000507761 ZFP91Q96JP5 570 aaPredicted RBP12.04□□□□□ -0.48
LINC01088-204ENST00000507761 ECM2O94769 699 aaPredicted RBP12.02□□□□□ -0.49
LINC01088-204ENST00000507761 DPY19L2Q6NUT2 758 aa12.02□□□□□ -0.49
LINC01088-204ENST00000507761 TAOK2Q9UL54 1235 aa12.02□□□□□ -0.49
LINC01088-204ENST00000507761 G3V3G9 751 aa11.98□□□□□ -0.49
LINC01088-204ENST00000507761 PKD2Q13563 968 aa11.98□□□□□ -0.49
LINC01088-204ENST00000507761 SOX12O15370 315 aa11.97□□□□□ -0.49
LINC01088-204ENST00000507761 BOLA1Q9Y3E2 137 aa11.97□□□□□ -0.49
LINC01088-204ENST00000507761 SNPHO15079 494 aa11.95□□□□□ -0.5
LINC01088-204ENST00000507761 BCL11BQ9C0K0 894 aaPredicted RBP11.93□□□□□ -0.5
LINC01088-204ENST00000507761 ST18O60284 1047 aa11.92□□□□□ -0.5
LINC01088-204ENST00000507761 RGL2O15211 777 aa11.9□□□□□ -0.5
LINC01088-204ENST00000507761 PCDH10Q9P2E7 1040 aa11.9□□□□□ -0.5
LINC01088-204ENST00000507761 STK24Q9Y6E0 443 aa11.9□□□□□ -0.5
LINC01088-204ENST00000507761 TMEM121BQ9BXQ6 578 aaPredicted RBP11.89□□□□□ -0.51
LINC01088-204ENST00000507761 PHF8Q9UPP1 1060 aa11.89□□□□□ -0.51
LINC01088-204ENST00000507761 STK25O00506 426 aa11.88□□□□□ -0.51
LINC01088-204ENST00000507761 MS4A4AQ96JQ5 239 aa11.86□□□□□ -0.51
LINC01088-204ENST00000507761 NLRP6P59044 892 aa11.85□□□□□ -0.51
LINC01088-204ENST00000507761 MICALL2Q8IY33 904 aa11.83□□□□□ -0.52
LINC01088-204ENST00000507761 PLSCR2Q9NRY7 297 aa11.82□□□□□ -0.52
LINC01088-204ENST00000507761 FBXO22Q8NEZ5 403 aa11.8□□□□□ -0.52
LINC01088-204ENST00000507761 MFRPQ9BY79 579 aa11.78□□□□□ -0.52
LINC01088-204ENST00000507761 CDAN1Q8IWY9 1227 aa11.75□□□□□ -0.53
LINC01088-204ENST00000507761 MARVELD3Q96A59 401 aa11.74□□□□□ -0.53
LINC01088-204ENST00000507761 HOXB3P14651 431 aaPredicted RBP11.72□□□□□ -0.53
LINC01088-204ENST00000507761 TMEM92Q6UXU6 159 aa11.72□□□□□ -0.53
LINC01088-204ENST00000507761 DOK7Q18PE1 504 aa11.71□□□□□ -0.53
LINC01088-204ENST00000507761 EMP3P54852 163 aa11.69□□□□□ -0.54
LINC01088-204ENST00000507761 ZNF710Q8N1W2 664 aa11.69□□□□□ -0.54
LINC01088-204ENST00000507761 HS6ST3Q8IZP7 471 aa11.68□□□□□ -0.54
LINC01088-204ENST00000507761 RIMBP2O15034 1052 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms