RNA–Protein interactions for RNA: ENST00000507761.1

LINC01088-204, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 842 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-204ENST00000507761 RASEFQ8IZ41 740 aa12.93□□□□□ -0.34
LINC01088-204ENST00000507761 MS4A3Q96HJ5 214 aa12.88□□□□□ -0.35
LINC01088-204ENST00000507761 NUBP1P53384 320 aa12.87□□□□□ -0.35
LINC01088-204ENST00000507761 LHX8Q68G74 356 aa12.85□□□□□ -0.35
LINC01088-204ENST00000507761 KIF12Q96FN5 646 aa12.85□□□□□ -0.35
LINC01088-204ENST00000507761 VASPP50552 380 aaPredicted RBP12.83□□□□□ -0.36
LINC01088-204ENST00000507761 FAM212AQ96EL1 285 aa12.8□□□□□ -0.36
LINC01088-204ENST00000507761 MAP3K13O43283 966 aa12.78□□□□□ -0.36
LINC01088-204ENST00000507761 ASTLQ6HA08 431 aaPredicted RBP12.75□□□□□ -0.37
LINC01088-204ENST00000507761 KLHL34Q8N239 644 aa12.75□□□□□ -0.37
LINC01088-204ENST00000507761 ATMINO43313 823 aaPredicted RBP12.73□□□□□ -0.37
LINC01088-204ENST00000507761 PELP1Q8IZL8 1130 aaKnown RBP12.72□□□□□ -0.37
LINC01088-204ENST00000507761 DCAF8Q5TAQ9 597 aa12.71□□□□□ -0.37
LINC01088-204ENST00000507761 SGIP1Q9BQI5 828 aa12.71□□□□□ -0.37
LINC01088-204ENST00000507761 PCDHB13Q9Y5F0 798 aa12.69□□□□□ -0.38
LINC01088-204ENST00000507761 TRPC6Q9Y210 931 aa12.67□□□□□ -0.38
LINC01088-204ENST00000507761 TIE1P35590 1138 aa12.66□□□□□ -0.38
LINC01088-204ENST00000507761 ATN1P54259 1190 aaPredicted RBP12.65□□□□□ -0.38
LINC01088-204ENST00000507761 SLC39A7Q92504 469 aa12.65□□□□□ -0.38
LINC01088-204ENST00000507761 BMP2KQ9NSY1 1161 aaPredicted RBP12.65□□□□□ -0.38
LINC01088-204ENST00000507761 C7P10643 843 aa12.63□□□□□ -0.39
LINC01088-204ENST00000507761 METRNQ9UJH8 293 aa12.63□□□□□ -0.39
LINC01088-204ENST00000507761 GSE1Q14687 1217 aa12.61□□□□□ -0.39
LINC01088-204ENST00000507761 IFNL1Q8IU54 200 aa12.61□□□□□ -0.39
LINC01088-204ENST00000507761 IFNLR1Q8IU57 520 aaPredicted RBP12.61□□□□□ -0.39
LINC01088-204ENST00000507761 PYGBP11216 843 aa12.6□□□□□ -0.39
LINC01088-204ENST00000507761 TTLL13PA6NNM8 815 aa12.58□□□□□ -0.4
LINC01088-204ENST00000507761 POTEB2H3BUK9 544 aa12.57□□□□□ -0.4
LINC01088-204ENST00000507761 SPOCK2Q92563 424 aa12.57□□□□□ -0.4
LINC01088-204ENST00000507761 TMEM106CQ9BVX2 250 aa12.5□□□□□ -0.41
LINC01088-204ENST00000507761 TRIM35Q9UPQ4 493 aa12.5□□□□□ -0.41
LINC01088-204ENST00000507761 OTUD5Q96G74 571 aa12.49□□□□□ -0.41
LINC01088-204ENST00000507761 CHRM1P11229 460 aaPredicted RBP12.48□□□□□ -0.41
LINC01088-204ENST00000507761 PCDHB8Q9UN66 801 aa12.48□□□□□ -0.41
LINC01088-204ENST00000507761 IER5LQ5T953 404 aa12.46□□□□□ -0.41
LINC01088-204ENST00000507761 CIZ1Q9ULV3 898 aaPredicted RBP12.46□□□□□ -0.41
LINC01088-204ENST00000507761 POTEFA5A3E0 1075 aa12.45□□□□□ -0.42
LINC01088-204ENST00000507761 ZNF467Q7Z7K2 595 aaPredicted RBP12.45□□□□□ -0.42
LINC01088-204ENST00000507761 SEC24BO95487 1268 aa12.44□□□□□ -0.42
LINC01088-204ENST00000507761 POTEJP0CG39 1038 aa12.42□□□□□ -0.42
LINC01088-204ENST00000507761 MAMSTRQ6ZN01 415 aa12.42□□□□□ -0.42
LINC01088-204ENST00000507761 COLQQ9Y215 455 aaPredicted RBP12.41□□□□□ -0.42
LINC01088-204ENST00000507761 SCUBE2Q9NQ36 999 aa12.36□□□□□ -0.43
LINC01088-204ENST00000507761 TRIM41Q8WV44 630 aa12.33□□□□□ -0.44
LINC01088-204ENST00000507761 PLCG2P16885 1265 aa12.32□□□□□ -0.44
LINC01088-204ENST00000507761 PSEN1P49768 467 aa12.32□□□□□ -0.44
LINC01088-204ENST00000507761 IRX5P78411 483 aaPredicted RBP12.31□□□□□ -0.44
LINC01088-204ENST00000507761 GOLGA2Q08379 1002 aa12.29□□□□□ -0.44
LINC01088-204ENST00000507761 PDAP1Q13442 181 aaKnown RBP12.29□□□□□ -0.44
LINC01088-204ENST00000507761 OCEL1Q9H607 264 aa12.28□□□□□ -0.44
LINC01088-204ENST00000507761 MKRN3Q13064 507 aaKnown RBP12.25□□□□□ -0.45
LINC01088-204ENST00000507761 PDCD7Q8N8D1 485 aaKnown RBP12.17□□□□□ -0.46
LINC01088-204ENST00000507761 CABP2Q9NPB3 220 aa12.17□□□□□ -0.46
LINC01088-204ENST00000507761 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.16□□□□□ -0.46
LINC01088-204ENST00000507761 RIOK3O14730 519 aaKnown RBP12.14□□□□□ -0.47
LINC01088-204ENST00000507761 SLAIN1Q8ND83 568 aa12.13□□□□□ -0.47
LINC01088-204ENST00000507761 RNF25Q96BH1 459 aaPredicted RBP12.11□□□□□ -0.47
LINC01088-204ENST00000507761 ILDR1Q86SU0 546 aaPredicted RBP12.1□□□□□ -0.47
LINC01088-204ENST00000507761 FAM163AQ96GL9 167 aaPredicted RBP12.1□□□□□ -0.47
LINC01088-204ENST00000507761 L3MBTL3Q96JM7 780 aaPredicted RBP12.1□□□□□ -0.47
LINC01088-204ENST00000507761 VGFO15240 615 aaPredicted RBP12.08□□□□□ -0.48
LINC01088-204ENST00000507761 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.08□□□□□ -0.48
LINC01088-204ENST00000507761 POTEMA6NI47 508 aa12.07□□□□□ -0.48
LINC01088-204ENST00000507761 POTEGQ6S5H5 508 aa12.05□□□□□ -0.48
LINC01088-204ENST00000507761 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.04□□□□□ -0.48
LINC01088-204ENST00000507761 LCE2DQ5TA82 110 aaPredicted RBP12.04□□□□□ -0.48
LINC01088-204ENST00000507761 C3orf67Q6ZVT6 689 aa12.04□□□□□ -0.48
LINC01088-204ENST00000507761 EFCAB3Q8N7B9 438 aa12.04□□□□□ -0.48
LINC01088-204ENST00000507761 ZFP91Q96JP5 570 aaPredicted RBP12.04□□□□□ -0.48
LINC01088-204ENST00000507761 ECM2O94769 699 aaPredicted RBP12.02□□□□□ -0.49
LINC01088-204ENST00000507761 DPY19L2Q6NUT2 758 aa12.02□□□□□ -0.49
LINC01088-204ENST00000507761 TAOK2Q9UL54 1235 aa12.02□□□□□ -0.49
LINC01088-204ENST00000507761 G3V3G9 751 aa11.98□□□□□ -0.49
LINC01088-204ENST00000507761 PKD2Q13563 968 aa11.98□□□□□ -0.49
LINC01088-204ENST00000507761 SOX12O15370 315 aa11.97□□□□□ -0.49
LINC01088-204ENST00000507761 BOLA1Q9Y3E2 137 aa11.97□□□□□ -0.49
LINC01088-204ENST00000507761 SNPHO15079 494 aa11.95□□□□□ -0.5
LINC01088-204ENST00000507761 BCL11BQ9C0K0 894 aaPredicted RBP11.93□□□□□ -0.5
LINC01088-204ENST00000507761 ST18O60284 1047 aa11.92□□□□□ -0.5
LINC01088-204ENST00000507761 RGL2O15211 777 aa11.9□□□□□ -0.5
LINC01088-204ENST00000507761 PCDH10Q9P2E7 1040 aa11.9□□□□□ -0.5
LINC01088-204ENST00000507761 STK24Q9Y6E0 443 aa11.9□□□□□ -0.5
LINC01088-204ENST00000507761 TMEM121BQ9BXQ6 578 aaPredicted RBP11.89□□□□□ -0.51
LINC01088-204ENST00000507761 PHF8Q9UPP1 1060 aa11.89□□□□□ -0.51
LINC01088-204ENST00000507761 STK25O00506 426 aa11.88□□□□□ -0.51
LINC01088-204ENST00000507761 MS4A4AQ96JQ5 239 aa11.86□□□□□ -0.51
LINC01088-204ENST00000507761 NLRP6P59044 892 aa11.85□□□□□ -0.51
LINC01088-204ENST00000507761 MICALL2Q8IY33 904 aa11.83□□□□□ -0.52
LINC01088-204ENST00000507761 PLSCR2Q9NRY7 297 aa11.82□□□□□ -0.52
LINC01088-204ENST00000507761 FBXO22Q8NEZ5 403 aa11.8□□□□□ -0.52
LINC01088-204ENST00000507761 MFRPQ9BY79 579 aa11.78□□□□□ -0.52
LINC01088-204ENST00000507761 CDAN1Q8IWY9 1227 aa11.75□□□□□ -0.53
LINC01088-204ENST00000507761 MARVELD3Q96A59 401 aa11.74□□□□□ -0.53
LINC01088-204ENST00000507761 HOXB3P14651 431 aaPredicted RBP11.72□□□□□ -0.53
LINC01088-204ENST00000507761 TMEM92Q6UXU6 159 aa11.72□□□□□ -0.53
LINC01088-204ENST00000507761 DOK7Q18PE1 504 aa11.71□□□□□ -0.53
LINC01088-204ENST00000507761 EMP3P54852 163 aa11.69□□□□□ -0.54
LINC01088-204ENST00000507761 ZNF710Q8N1W2 664 aa11.69□□□□□ -0.54
LINC01088-204ENST00000507761 HS6ST3Q8IZP7 471 aa11.68□□□□□ -0.54
LINC01088-204ENST00000507761 RIMBP2O15034 1052 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms