RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 CDAN1Q8IWY9 1227 aa12.35□□□□□ -0.43
AC008539.1-201ENST00000507653 ATMINO43313 823 aaPredicted RBP12.33□□□□□ -0.44
AC008539.1-201ENST00000507653 SCUBE2Q9NQ36 999 aa12.3□□□□□ -0.44
AC008539.1-201ENST00000507653 PAK3O75914 559 aaPredicted RBP12.28□□□□□ -0.44
AC008539.1-201ENST00000507653 MS4A3Q96HJ5 214 aa12.26□□□□□ -0.45
AC008539.1-201ENST00000507653 POTEFA5A3E0 1075 aa12.19□□□□□ -0.46
AC008539.1-201ENST00000507653 MMRN1Q13201 1228 aa12.16□□□□□ -0.46
AC008539.1-201ENST00000507653 ATN1P54259 1190 aaPredicted RBP12.15□□□□□ -0.46
AC008539.1-201ENST00000507653 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
AC008539.1-201ENST00000507653 SPNS2Q8IVW8 549 aa12.09□□□□□ -0.47
AC008539.1-201ENST00000507653 STAG3Q9UJ98 1225 aa12.07□□□□□ -0.48
AC008539.1-201ENST00000507653 NPM1P06748 294 aaKnown RBP eCLIP12.04□□□□□ -0.48
AC008539.1-201ENST00000507653 ST18O60284 1047 aa12.03□□□□□ -0.48
AC008539.1-201ENST00000507653 BMP2KQ9NSY1 1161 aaPredicted RBP11.98□□□□□ -0.49
AC008539.1-201ENST00000507653 COLQQ9Y215 455 aaPredicted RBP11.97□□□□□ -0.49
AC008539.1-201ENST00000507653 TRPC6Q9Y210 931 aa11.94□□□□□ -0.5
AC008539.1-201ENST00000507653 CCDC61Q9Y6R9 512 aa11.9□□□□□ -0.5
AC008539.1-201ENST00000507653 KIF12Q96FN5 646 aa11.87□□□□□ -0.51
AC008539.1-201ENST00000507653 SLAIN1Q8ND83 568 aa11.86□□□□□ -0.51
AC008539.1-201ENST00000507653 TSPYL2Q9H2G4 693 aaPredicted RBP11.85□□□□□ -0.51
AC008539.1-201ENST00000507653 SEC24BO95487 1268 aa11.84□□□□□ -0.51
AC008539.1-201ENST00000507653 TIE1P35590 1138 aa11.84□□□□□ -0.51
AC008539.1-201ENST00000507653 TTLL13PA6NNM8 815 aa11.78□□□□□ -0.52
AC008539.1-201ENST00000507653 TMEM121BQ9BXQ6 578 aaPredicted RBP11.77□□□□□ -0.53
AC008539.1-201ENST00000507653 MAP3K13O43283 966 aa11.75□□□□□ -0.53
AC008539.1-201ENST00000507653 IER5LQ5T953 404 aa11.73□□□□□ -0.53
AC008539.1-201ENST00000507653 MARVELD3Q96A59 401 aa11.71□□□□□ -0.53
AC008539.1-201ENST00000507653 TRIM35Q9UPQ4 493 aa11.7□□□□□ -0.54
AC008539.1-201ENST00000507653 KRTAP3-3Q9BYR6 98 aa11.65□□□□□ -0.54
AC008539.1-201ENST00000507653 KRTAP3-2Q9BYR7 98 aa11.65□□□□□ -0.54
AC008539.1-201ENST00000507653 SPDYE4A6NLX3 237 aa11.64□□□□□ -0.55
AC008539.1-201ENST00000507653 POTEB3A0JP26 581 aa11.57□□□□□ -0.56
AC008539.1-201ENST00000507653 SNPHO15079 494 aa11.57□□□□□ -0.56
AC008539.1-201ENST00000507653 POTEBQ6S5H4 581 aa11.57□□□□□ -0.56
AC008539.1-201ENST00000507653 PLCG2P16885 1265 aa11.53□□□□□ -0.56
AC008539.1-201ENST00000507653 IRX5P78411 483 aaPredicted RBP11.52□□□□□ -0.57
AC008539.1-201ENST00000507653 RASEFQ8IZ41 740 aa11.52□□□□□ -0.57
AC008539.1-201ENST00000507653 EMP3P54852 163 aa11.5□□□□□ -0.57
AC008539.1-201ENST00000507653 HS3ST6Q96QI5 342 aa11.49□□□□□ -0.57
AC008539.1-201ENST00000507653 SGIP1Q9BQI5 828 aa11.47□□□□□ -0.57
AC008539.1-201ENST00000507653 PCDHB13Q9Y5F0 798 aa11.46□□□□□ -0.57
AC008539.1-201ENST00000507653 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.44□□□□□ -0.58
AC008539.1-201ENST00000507653 FAM205CA6NFA0 338 aa11.43□□□□□ -0.58
AC008539.1-201ENST00000507653 TMEM106CQ9BVX2 250 aa11.42□□□□□ -0.58
AC008539.1-201ENST00000507653 IFNL1Q8IU54 200 aa11.4□□□□□ -0.58
AC008539.1-201ENST00000507653 OCEL1Q9H607 264 aa11.38□□□□□ -0.59
AC008539.1-201ENST00000507653 RNF166Q96A37 237 aaPredicted RBP11.34□□□□□ -0.59
AC008539.1-201ENST00000507653 PROM2Q8N271 834 aa11.27□□□□□ -0.61
AC008539.1-201ENST00000507653 C3orf67Q6ZVT6 689 aa11.2□□□□□ -0.62
AC008539.1-201ENST00000507653 PDCD7Q8N8D1 485 aaKnown RBP11.2□□□□□ -0.62
AC008539.1-201ENST00000507653 MIER1Q8N108 512 aa11.19□□□□□ -0.62
AC008539.1-201ENST00000507653 MYT1LQ9UL68 1186 aa11.19□□□□□ -0.62
AC008539.1-201ENST00000507653 PLEKHG5O94827 1062 aa11.18□□□□□ -0.62
AC008539.1-201ENST00000507653 NUBP1P53384 320 aa11.16□□□□□ -0.62
AC008539.1-201ENST00000507653 HOXB3P14651 431 aaPredicted RBP11.12□□□□□ -0.63
AC008539.1-201ENST00000507653 CSRNP3Q8WYN3 585 aa11.1□□□□□ -0.63
AC008539.1-201ENST00000507653 L3MBTL3Q96JM7 780 aaPredicted RBP11.08□□□□□ -0.64
AC008539.1-201ENST00000507653 EHMT2Q96KQ7 1210 aa11.08□□□□□ -0.64
AC008539.1-201ENST00000507653 HOXB1P14653 301 aaPredicted RBP11.07□□□□□ -0.64
AC008539.1-201ENST00000507653 ERBB3P21860 1342 aa11.06□□□□□ -0.64
AC008539.1-201ENST00000507653 FAM212AQ96EL1 285 aa11.03□□□□□ -0.64
AC008539.1-201ENST00000507653 PCDHB8Q9UN66 801 aa11□□□□□ -0.65
AC008539.1-201ENST00000507653 VARS2Q5ST30 1063 aaKnown RBP10.99□□□□□ -0.65
AC008539.1-201ENST00000507653 PLCD3Q8N3E9 789 aa10.96□□□□□ -0.65
AC008539.1-201ENST00000507653 PYGBP11216 843 aa10.95□□□□□ -0.66
AC008539.1-201ENST00000507653 PTGER2P43116 358 aa10.95□□□□□ -0.66
AC008539.1-201ENST00000507653 ZNF710Q8N1W2 664 aa10.95□□□□□ -0.66
AC008539.1-201ENST00000507653 ZNF687Q8N1G0 1237 aa10.93□□□□□ -0.66
AC008539.1-201ENST00000507653 MKRN3Q13064 507 aaKnown RBP10.92□□□□□ -0.66
AC008539.1-201ENST00000507653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.92□□□□□ -0.66
AC008539.1-201ENST00000507653 ZBTB47Q9UFB7 747 aaPredicted RBP10.92□□□□□ -0.66
AC008539.1-201ENST00000507653 ILDR1Q86SU0 546 aaPredicted RBP10.9□□□□□ -0.66
AC008539.1-201ENST00000507653 DOK7Q18PE1 504 aa10.89□□□□□ -0.67
AC008539.1-201ENST00000507653 DPY19L2Q6NUT2 758 aa10.89□□□□□ -0.67
AC008539.1-201ENST00000507653 PLA2G2EQ9NZK7 142 aa10.89□□□□□ -0.67
AC008539.1-201ENST00000507653 GOLGA2Q08379 1002 aa10.86□□□□□ -0.67
AC008539.1-201ENST00000507653 DCAF8Q5TAQ9 597 aa10.8□□□□□ -0.68
AC008539.1-201ENST00000507653 ANKRD13DQ6ZTN6 518 aa10.8□□□□□ -0.68
AC008539.1-201ENST00000507653 BOLA1Q9Y3E2 137 aa10.8□□□□□ -0.68
AC008539.1-201ENST00000507653 RIMBP2O15034 1052 aa10.78□□□□□ -0.68
AC008539.1-201ENST00000507653 GPR153Q6NV75 609 aa10.74□□□□□ -0.69
AC008539.1-201ENST00000507653 ZNF467Q7Z7K2 595 aaPredicted RBP10.73□□□□□ -0.69
AC008539.1-201ENST00000507653 ZSWIM6Q9HCJ5 1215 aa10.73□□□□□ -0.69
AC008539.1-201ENST00000507653 LSM11P83369 360 aaKnown RBP eCLIP10.72□□□□□ -0.69
AC008539.1-201ENST00000507653 G3V3G9 751 aa10.71□□□□□ -0.69
AC008539.1-201ENST00000507653 PSEN1P49768 467 aa10.69□□□□□ -0.7
AC008539.1-201ENST00000507653 HCSTQ9UBK5 93 aa10.68□□□□□ -0.7
AC008539.1-201ENST00000507653 TMEM92Q6UXU6 159 aa10.63□□□□□ -0.71
AC008539.1-201ENST00000507653 ZNF316A6NFI3 1004 aaPredicted RBP10.58□□□□□ -0.72
AC008539.1-201ENST00000507653 ARSIQ5FYB1 569 aa10.58□□□□□ -0.72
AC008539.1-201ENST00000507653 CABP2Q9NPB3 220 aa10.58□□□□□ -0.72
AC008539.1-201ENST00000507653 POTEEQ6S8J3 1075 aa10.56□□□□□ -0.72
AC008539.1-201ENST00000507653 CHRM1P11229 460 aaPredicted RBP10.55□□□□□ -0.72
AC008539.1-201ENST00000507653 IRX2Q9BZI1 471 aaPredicted RBP10.55□□□□□ -0.72
AC008539.1-201ENST00000507653 KHSRPQ92945 711 aaKnown RBP eCLIP10.54□□□□□ -0.72
AC008539.1-201ENST00000507653 PDAP1Q13442 181 aaKnown RBP10.53□□□□□ -0.72
AC008539.1-201ENST00000507653 PBX2P40425 430 aa10.5□□□□□ -0.73
AC008539.1-201ENST00000507653 RGS20O76081 388 aa10.48□□□□□ -0.73
AC008539.1-201ENST00000507653 GSE1Q14687 1217 aa10.48□□□□□ -0.73
AC008539.1-201ENST00000507653 MICALL2Q8IY33 904 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms