RNA–Protein interactions for RNA: ENST00000507637.1

SMAD5-204, Transcript of SMAD family member 5, humanhuman

TSL 2

Gene SMAD5, Length 638 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-204ENST00000507637 GSE1Q14687 1217 aa14.3□□□□□ -0.12
SMAD5-204ENST00000507637 DCAF8Q5TAQ9 597 aa14.3□□□□□ -0.12
SMAD5-204ENST00000507637 SP7Q8TDD2 431 aaPredicted RBP14.25□□□□□ -0.13
SMAD5-204ENST00000507637 CLCN6P51797 869 aa14.21□□□□□ -0.13
SMAD5-204ENST00000507637 PHF12Q96QT6 1004 aa14.21□□□□□ -0.13
SMAD5-204ENST00000507637 CIZ1Q9ULV3 898 aaPredicted RBP14.21□□□□□ -0.13
SMAD5-204ENST00000507637 CHRM1P11229 460 aaPredicted RBP14.19□□□□□ -0.14
SMAD5-204ENST00000507637 KIF12Q96FN5 646 aa14.19□□□□□ -0.14
SMAD5-204ENST00000507637 GABBR2O75899 941 aa14.15□□□□□ -0.14
SMAD5-204ENST00000507637 PKD2Q13563 968 aa14.15□□□□□ -0.14
SMAD5-204ENST00000507637 TRIM41Q8WV44 630 aa14.14□□□□□ -0.15
SMAD5-204ENST00000507637 PYGBP11216 843 aa14.13□□□□□ -0.15
SMAD5-204ENST00000507637 SGIP1Q9BQI5 828 aa14.13□□□□□ -0.15
SMAD5-204ENST00000507637 MAP3K13O43283 966 aa14.12□□□□□ -0.15
SMAD5-204ENST00000507637 GALR2O43603 387 aaPredicted RBP14.06□□□□□ -0.16
SMAD5-204ENST00000507637 MS4A3Q96HJ5 214 aa14.06□□□□□ -0.16
SMAD5-204ENST00000507637 PCDHB13Q9Y5F0 798 aa14.04□□□□□ -0.16
SMAD5-204ENST00000507637 AMER1Q5JTC6 1135 aaPredicted RBP14.02□□□□□ -0.17
SMAD5-204ENST00000507637 ECM2O94769 699 aaPredicted RBP14.01□□□□□ -0.17
SMAD5-204ENST00000507637 IFNL1Q8IU54 200 aa14.01□□□□□ -0.17
SMAD5-204ENST00000507637 ZNF467Q7Z7K2 595 aaPredicted RBP13.97□□□□□ -0.17
SMAD5-204ENST00000507637 RNF25Q96BH1 459 aaPredicted RBP13.97□□□□□ -0.17
SMAD5-204ENST00000507637 RTN4Q9NQC3 1192 aaKnown RBP13.97□□□□□ -0.17
SMAD5-204ENST00000507637 PCDHB8Q9UN66 801 aa13.96□□□□□ -0.17
SMAD5-204ENST00000507637 TRPC6Q9Y210 931 aa13.94□□□□□ -0.18
SMAD5-204ENST00000507637 RGL2O15211 777 aa13.91□□□□□ -0.18
SMAD5-204ENST00000507637 RIOK3O14730 519 aaKnown RBP13.9□□□□□ -0.18
SMAD5-204ENST00000507637 POTEIP0CG38 1075 aa13.89□□□□□ -0.19
SMAD5-204ENST00000507637 TIE1P35590 1138 aa13.89□□□□□ -0.19
SMAD5-204ENST00000507637 ASTLQ6HA08 431 aaPredicted RBP13.86□□□□□ -0.19
SMAD5-204ENST00000507637 BMP2KQ9NSY1 1161 aaPredicted RBP13.86□□□□□ -0.19
SMAD5-204ENST00000507637 DCBLD2Q96PD2 775 aa13.85□□□□□ -0.19
SMAD5-204ENST00000507637 ATMINO43313 823 aaPredicted RBP13.84□□□□□ -0.19
SMAD5-204ENST00000507637 PDAP1Q13442 181 aaKnown RBP13.84□□□□□ -0.19
SMAD5-204ENST00000507637 TTLL13PA6NNM8 815 aa13.82□□□□□ -0.2
SMAD5-204ENST00000507637 VGFO15240 615 aaPredicted RBP13.82□□□□□ -0.2
SMAD5-204ENST00000507637 PSEN1P49768 467 aa13.82□□□□□ -0.2
SMAD5-204ENST00000507637 TMEM106CQ9BVX2 250 aa13.79□□□□□ -0.2
SMAD5-204ENST00000507637 ATN1P54259 1190 aaPredicted RBP13.78□□□□□ -0.2
SMAD5-204ENST00000507637 TAOK2Q9UL54 1235 aa13.78□□□□□ -0.2
SMAD5-204ENST00000507637 PELP1Q8IZL8 1130 aaKnown RBP13.77□□□□□ -0.21
SMAD5-204ENST00000507637 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.75□□□□□ -0.21
SMAD5-204ENST00000507637 ZFP91Q96JP5 570 aaPredicted RBP13.75□□□□□ -0.21
SMAD5-204ENST00000507637 TRIM35Q9UPQ4 493 aa13.71□□□□□ -0.21
SMAD5-204ENST00000507637 BCL11BQ9C0K0 894 aaPredicted RBP13.65□□□□□ -0.22
SMAD5-204ENST00000507637 IER5LQ5T953 404 aa13.64□□□□□ -0.23
SMAD5-204ENST00000507637 SLC39A7Q92504 469 aa13.64□□□□□ -0.23
SMAD5-204ENST00000507637 STK25O00506 426 aa13.63□□□□□ -0.23
SMAD5-204ENST00000507637 C7P10643 843 aa13.63□□□□□ -0.23
SMAD5-204ENST00000507637 HS6ST3Q8IZP7 471 aa13.63□□□□□ -0.23
SMAD5-204ENST00000507637 CABP2Q9NPB3 220 aa13.62□□□□□ -0.23
SMAD5-204ENST00000507637 STK24Q9Y6E0 443 aa13.6□□□□□ -0.23
SMAD5-204ENST00000507637 CHGAP10645 457 aaKnown RBP13.59□□□□□ -0.23
SMAD5-204ENST00000507637 DNAJC5Q9H3Z4 198 aa13.59□□□□□ -0.23
SMAD5-204ENST00000507637 METRNQ9UJH8 293 aa13.58□□□□□ -0.24
SMAD5-204ENST00000507637 GOLGA2Q08379 1002 aa13.57□□□□□ -0.24
SMAD5-204ENST00000507637 ILDR1Q86SU0 546 aaPredicted RBP13.57□□□□□ -0.24
SMAD5-204ENST00000507637 EFCAB3Q8N7B9 438 aa13.57□□□□□ -0.24
SMAD5-204ENST00000507637 POTEFA5A3E0 1075 aa13.56□□□□□ -0.24
SMAD5-204ENST00000507637 IRX5P78411 483 aaPredicted RBP13.56□□□□□ -0.24
SMAD5-204ENST00000507637 MKRN3Q13064 507 aaKnown RBP13.56□□□□□ -0.24
SMAD5-204ENST00000507637 DCAF8L2P0C7V8 631 aa13.54□□□□□ -0.24
SMAD5-204ENST00000507637 SOX12O15370 315 aa13.53□□□□□ -0.24
SMAD5-204ENST00000507637 COLQQ9Y215 455 aaPredicted RBP13.52□□□□□ -0.25
SMAD5-204ENST00000507637 OCEL1Q9H607 264 aa13.5□□□□□ -0.25
SMAD5-204ENST00000507637 PDCD7Q8N8D1 485 aaKnown RBP13.48□□□□□ -0.25
SMAD5-204ENST00000507637 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.48□□□□□ -0.257e-9■■■■□ 19.7
SMAD5-204ENST00000507637 SEC24BO95487 1268 aa13.47□□□□□ -0.25
SMAD5-204ENST00000507637 NKX1-1Q15270 411 aaPredicted RBP13.46□□□□□ -0.25
SMAD5-204ENST00000507637 MFRPQ9BY79 579 aa13.46□□□□□ -0.25
SMAD5-204ENST00000507637 POTEB2H3BUK9 544 aa13.45□□□□□ -0.26
SMAD5-204ENST00000507637 FBXO22Q8NEZ5 403 aa13.45□□□□□ -0.26
SMAD5-204ENST00000507637 PLCG2P16885 1265 aa13.44□□□□□ -0.26
SMAD5-204ENST00000507637 PHF8Q9UPP1 1060 aa13.44□□□□□ -0.26
SMAD5-204ENST00000507637 NLRP6P59044 892 aa13.42□□□□□ -0.26
SMAD5-204ENST00000507637 MS4A4AQ96JQ5 239 aa13.42□□□□□ -0.26
SMAD5-204ENST00000507637 BBXQ8WY36 941 aaPredicted RBP13.4□□□□□ -0.26
SMAD5-204ENST00000507637 POTEJP0CG39 1038 aa13.38□□□□□ -0.27
SMAD5-204ENST00000507637 LHX8Q68G74 356 aa13.37□□□□□ -0.27
SMAD5-204ENST00000507637 DPY19L2Q6NUT2 758 aa13.37□□□□□ -0.27
SMAD5-204ENST00000507637 GTPBP6O43824 516 aaPredicted RBP13.32□□□□□ -0.28
SMAD5-204ENST00000507637 L3MBTL3Q96JM7 780 aaPredicted RBP13.31□□□□□ -0.28
SMAD5-204ENST00000507637 RYDENQ9NUL5 291 aaKnown RBP13.3□□□□□ -0.28
SMAD5-204ENST00000507637 TMEM121BQ9BXQ6 578 aaPredicted RBP13.29□□□□□ -0.28
SMAD5-204ENST00000507637 PPP1R37O75864 691 aa13.26□□□□□ -0.29
SMAD5-204ENST00000507637 BOLA1Q9Y3E2 137 aa13.26□□□□□ -0.29
SMAD5-204ENST00000507637 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.25□□□□□ -0.29
SMAD5-204ENST00000507637 MAMSTRQ6ZN01 415 aa13.23□□□□□ -0.29
SMAD5-204ENST00000507637 OTUD5Q96G74 571 aa13.23□□□□□ -0.29
SMAD5-204ENST00000507637 MICALL2Q8IY33 904 aa13.21□□□□□ -0.29
SMAD5-204ENST00000507637 SPRYD3Q8NCJ5 442 aa13.2□□□□□ -0.3
SMAD5-204ENST00000507637 SCUBE2Q9NQ36 999 aa13.18□□□□□ -0.3
SMAD5-204ENST00000507637 G3V3G9 751 aa13.16□□□□□ -0.3
SMAD5-204ENST00000507637 PAXIP1Q6ZW49 1069 aaPredicted RBP13.14□□□□□ -0.31
SMAD5-204ENST00000507637 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.13□□□□□ -0.31
SMAD5-204ENST00000507637 C3orf67Q6ZVT6 689 aa13.12□□□□□ -0.31
SMAD5-204ENST00000507637 CFAP44Q96MT7 982 aa13.1□□□□□ -0.31
SMAD5-204ENST00000507637 TMEM92Q6UXU6 159 aa13.08□□□□□ -0.32
SMAD5-204ENST00000507637 SLAIN1Q8ND83 568 aa13.05□□□□□ -0.32
SMAD5-204ENST00000507637 KIF3CO14782 793 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms