RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 ZBTB47Q9UFB7 747 aaPredicted RBP16.3■□□□□ 0.2
LINC01088-203ENST00000507476 MS4A3Q96HJ5 214 aa16.29■□□□□ 0.2
LINC01088-203ENST00000507476 NUBP1P53384 320 aa16.28■□□□□ 0.2
LINC01088-203ENST00000507476 KIF12Q96FN5 646 aa16.24■□□□□ 0.19
LINC01088-203ENST00000507476 VASPP50552 380 aaPredicted RBP16.21■□□□□ 0.19
LINC01088-203ENST00000507476 LHX8Q68G74 356 aa16.21■□□□□ 0.19
LINC01088-203ENST00000507476 MAP3K13O43283 966 aa16.15■□□□□ 0.18
LINC01088-203ENST00000507476 PELP1Q8IZL8 1130 aaKnown RBP16.13■□□□□ 0.17
LINC01088-203ENST00000507476 ASTLQ6HA08 431 aaPredicted RBP16.11■□□□□ 0.17
LINC01088-203ENST00000507476 FAM212AQ96EL1 285 aa16.11■□□□□ 0.17
LINC01088-203ENST00000507476 ATMINO43313 823 aaPredicted RBP16.09■□□□□ 0.17
LINC01088-203ENST00000507476 TRPC6Q9Y210 931 aa16.09■□□□□ 0.17
LINC01088-203ENST00000507476 KLHL34Q8N239 644 aa16.04■□□□□ 0.16
LINC01088-203ENST00000507476 ATN1P54259 1190 aaPredicted RBP16■□□□□ 0.15
LINC01088-203ENST00000507476 BMP2KQ9NSY1 1161 aaPredicted RBP16■□□□□ 0.15
LINC01088-203ENST00000507476 PCDHB13Q9Y5F0 798 aa16■□□□□ 0.15
LINC01088-203ENST00000507476 DCAF8Q5TAQ9 597 aa15.99■□□□□ 0.15
LINC01088-203ENST00000507476 SGIP1Q9BQI5 828 aa15.99■□□□□ 0.15
LINC01088-203ENST00000507476 POTEB2H3BUK9 544 aa15.96■□□□□ 0.15
LINC01088-203ENST00000507476 TIE1P35590 1138 aa15.96■□□□□ 0.15
LINC01088-203ENST00000507476 IFNLR1Q8IU57 520 aaPredicted RBP15.96■□□□□ 0.15
LINC01088-203ENST00000507476 IFNL1Q8IU54 200 aa15.95■□□□□ 0.14
LINC01088-203ENST00000507476 SLC39A7Q92504 469 aa15.94■□□□□ 0.14
LINC01088-203ENST00000507476 METRNQ9UJH8 293 aa15.94■□□□□ 0.14
LINC01088-203ENST00000507476 C7P10643 843 aa15.91■□□□□ 0.14
LINC01088-203ENST00000507476 PYGBP11216 843 aa15.91■□□□□ 0.14
LINC01088-203ENST00000507476 TTLL13PA6NNM8 815 aa15.9■□□□□ 0.14
LINC01088-203ENST00000507476 GSE1Q14687 1217 aa15.85■□□□□ 0.13
LINC01088-203ENST00000507476 SPOCK2Q92563 424 aa15.84■□□□□ 0.13
LINC01088-203ENST00000507476 OTUD5Q96G74 571 aa15.82■□□□□ 0.12
LINC01088-203ENST00000507476 POTEFA5A3E0 1075 aa15.8■□□□□ 0.12
LINC01088-203ENST00000507476 POTEJP0CG39 1038 aa15.79■□□□□ 0.12
LINC01088-203ENST00000507476 PCDHB8Q9UN66 801 aa15.79■□□□□ 0.12
LINC01088-203ENST00000507476 TRIM35Q9UPQ4 493 aa15.79■□□□□ 0.12
LINC01088-203ENST00000507476 TMEM106CQ9BVX2 250 aa15.78■□□□□ 0.12
LINC01088-203ENST00000507476 CHRM1P11229 460 aaPredicted RBP15.74■□□□□ 0.11
LINC01088-203ENST00000507476 COLQQ9Y215 455 aaPredicted RBP15.72■□□□□ 0.11
LINC01088-203ENST00000507476 CIZ1Q9ULV3 898 aaPredicted RBP15.7■□□□□ 0.1
LINC01088-203ENST00000507476 IER5LQ5T953 404 aa15.69■□□□□ 0.1
LINC01088-203ENST00000507476 ZNF467Q7Z7K2 595 aaPredicted RBP15.66■□□□□ 0.1
LINC01088-203ENST00000507476 SEC24BO95487 1268 aa15.65■□□□□ 0.1
LINC01088-203ENST00000507476 MAMSTRQ6ZN01 415 aa15.59■□□□□ 0.09
LINC01088-203ENST00000507476 IRX5P78411 483 aaPredicted RBP15.57■□□□□ 0.08
LINC01088-203ENST00000507476 PSEN1P49768 467 aa15.55■□□□□ 0.08
LINC01088-203ENST00000507476 SCUBE2Q9NQ36 999 aa15.54■□□□□ 0.08
LINC01088-203ENST00000507476 PLCG2P16885 1265 aa15.52■□□□□ 0.08
LINC01088-203ENST00000507476 PDAP1Q13442 181 aaKnown RBP15.5■□□□□ 0.07
LINC01088-203ENST00000507476 TRIM41Q8WV44 630 aa15.48■□□□□ 0.07
LINC01088-203ENST00000507476 OCEL1Q9H607 264 aa15.48■□□□□ 0.07
LINC01088-203ENST00000507476 GOLGA2Q08379 1002 aa15.41■□□□□ 0.06
LINC01088-203ENST00000507476 MKRN3Q13064 507 aaKnown RBP15.4■□□□□ 0.06
LINC01088-203ENST00000507476 PDCD7Q8N8D1 485 aaKnown RBP15.39■□□□□ 0.05
LINC01088-203ENST00000507476 RNF25Q96BH1 459 aaPredicted RBP15.36■□□□□ 0.05
LINC01088-203ENST00000507476 CABP2Q9NPB3 220 aa15.35■□□□□ 0.05
LINC01088-203ENST00000507476 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.33■□□□□ 0.04
LINC01088-203ENST00000507476 ILDR1Q86SU0 546 aaPredicted RBP15.31■□□□□ 0.04
LINC01088-203ENST00000507476 RIOK3O14730 519 aaKnown RBP15.3■□□□□ 0.04
LINC01088-203ENST00000507476 LCE2DQ5TA82 110 aaPredicted RBP15.3■□□□□ 0.04
LINC01088-203ENST00000507476 SLAIN1Q8ND83 568 aa15.29■□□□□ 0.04
LINC01088-203ENST00000507476 FAM163AQ96GL9 167 aaPredicted RBP15.26■□□□□ 0.03
LINC01088-203ENST00000507476 POTEMA6NI47 508 aa15.24■□□□□ 0.03
LINC01088-203ENST00000507476 DPY19L2Q6NUT2 758 aa15.23■□□□□ 0.03
LINC01088-203ENST00000507476 POTEGQ6S5H5 508 aa15.22■□□□□ 0.03
LINC01088-203ENST00000507476 EFCAB3Q8N7B9 438 aa15.22■□□□□ 0.03
LINC01088-203ENST00000507476 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.21■□□□□ 0.03
LINC01088-203ENST00000507476 L3MBTL3Q96JM7 780 aaPredicted RBP15.21■□□□□ 0.03
LINC01088-203ENST00000507476 ZFP91Q96JP5 570 aaPredicted RBP15.21■□□□□ 0.03
LINC01088-203ENST00000507476 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.21■□□□□ 0.03
LINC01088-203ENST00000507476 VGFO15240 615 aaPredicted RBP15.2■□□□□ 0.02
LINC01088-203ENST00000507476 PKD2Q13563 968 aa15.18■□□□□ 0.02
LINC01088-203ENST00000507476 ECM2O94769 699 aaPredicted RBP15.14■□□□□ 0.01
LINC01088-203ENST00000507476 C3orf67Q6ZVT6 689 aa15.14■□□□□ 0.01
LINC01088-203ENST00000507476 BOLA1Q9Y3E2 137 aa15.09■□□□□ 0.01
LINC01088-203ENST00000507476 RGL2O15211 777 aa15.07■□□□□ 0
LINC01088-203ENST00000507476 ST18O60284 1047 aa15.07■□□□□ 0
LINC01088-203ENST00000507476 SOX12O15370 315 aa15.06■□□□□ 0
LINC01088-203ENST00000507476 BCL11BQ9C0K0 894 aaPredicted RBP15.05■□□□□ -0
LINC01088-203ENST00000507476 TAOK2Q9UL54 1235 aa15.04■□□□□ -0
LINC01088-203ENST00000507476 MS4A4AQ96JQ5 239 aa15.03■□□□□ -0
LINC01088-203ENST00000507476 PHF8Q9UPP1 1060 aa15.03■□□□□ -0
LINC01088-203ENST00000507476 TMEM121BQ9BXQ6 578 aaPredicted RBP15.02■□□□□ -0
LINC01088-203ENST00000507476 G3V3G9 751 aa15.01□□□□□ -0.01
LINC01088-203ENST00000507476 STK24Q9Y6E0 443 aa15.01□□□□□ -0.01
LINC01088-203ENST00000507476 SNPHO15079 494 aa14.99□□□□□ -0.01
LINC01088-203ENST00000507476 STK25O00506 426 aa14.97□□□□□ -0.01
LINC01088-203ENST00000507476 MICALL2Q8IY33 904 aa14.95□□□□□ -0.02
LINC01088-203ENST00000507476 FBXO22Q8NEZ5 403 aa14.94□□□□□ -0.02
LINC01088-203ENST00000507476 PCDH10Q9P2E7 1040 aa14.94□□□□□ -0.02
LINC01088-203ENST00000507476 NLRP6P59044 892 aa14.91□□□□□ -0.02
LINC01088-203ENST00000507476 MFRPQ9BY79 579 aa14.91□□□□□ -0.02
LINC01088-203ENST00000507476 PLSCR2Q9NRY7 297 aa14.91□□□□□ -0.02
LINC01088-203ENST00000507476 TMEM92Q6UXU6 159 aa14.87□□□□□ -0.03
LINC01088-203ENST00000507476 MARVELD3Q96A59 401 aa14.85□□□□□ -0.03
LINC01088-203ENST00000507476 HOXB3P14651 431 aaPredicted RBP14.84□□□□□ -0.03
LINC01088-203ENST00000507476 CDAN1Q8IWY9 1227 aa14.83□□□□□ -0.04
LINC01088-203ENST00000507476 EMP3P54852 163 aa14.73□□□□□ -0.05
LINC01088-203ENST00000507476 HS6ST3Q8IZP7 471 aa14.73□□□□□ -0.05
LINC01088-203ENST00000507476 DOK7Q18PE1 504 aa14.71□□□□□ -0.05
LINC01088-203ENST00000507476 POTEB3A0JP26 581 aa14.68□□□□□ -0.06
LINC01088-203ENST00000507476 PPP1R37O75864 691 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms