RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 NUBP1P53384 320 aa12.18□□□□□ -0.46
CALCOCO2-208ENST00000506971 IFNLR1Q8IU57 520 aaPredicted RBP12.17□□□□□ -0.46
CALCOCO2-208ENST00000506971 DCBLD2Q96PD2 775 aa12.14□□□□□ -0.47
CALCOCO2-208ENST00000506971 GALR2O43603 387 aaPredicted RBP12.13□□□□□ -0.47
CALCOCO2-208ENST00000506971 SPOCK2Q92563 424 aa12.13□□□□□ -0.47
CALCOCO2-208ENST00000506971 CCDC61Q9Y6R9 512 aa12.13□□□□□ -0.47
CALCOCO2-208ENST00000506971 CIZ1Q9ULV3 898 aaPredicted RBP12.12□□□□□ -0.47
CALCOCO2-208ENST00000506971 CLCN6P51797 869 aa12.11□□□□□ -0.47
CALCOCO2-208ENST00000506971 MS4A3Q96HJ5 214 aa12.08□□□□□ -0.48
CALCOCO2-208ENST00000506971 PYGBP11216 843 aa12.07□□□□□ -0.48
CALCOCO2-208ENST00000506971 MAP3K13O43283 966 aa12.06□□□□□ -0.48
CALCOCO2-208ENST00000506971 GSE1Q14687 1217 aa12.05□□□□□ -0.48
CALCOCO2-208ENST00000506971 KIF12Q96FN5 646 aa12.05□□□□□ -0.48
CALCOCO2-208ENST00000506971 PCDHB13Q9Y5F0 798 aa12.03□□□□□ -0.48
CALCOCO2-208ENST00000506971 POTEIP0CG38 1075 aa11.95□□□□□ -0.5
CALCOCO2-208ENST00000506971 IFNL1Q8IU54 200 aa11.92□□□□□ -0.5
CALCOCO2-208ENST00000506971 TRPC6Q9Y210 931 aa11.92□□□□□ -0.5
CALCOCO2-208ENST00000506971 PCDHB8Q9UN66 801 aa11.91□□□□□ -0.5
CALCOCO2-208ENST00000506971 SGIP1Q9BQI5 828 aa11.87□□□□□ -0.51
CALCOCO2-208ENST00000506971 ATMINO43313 823 aaPredicted RBP11.85□□□□□ -0.51
CALCOCO2-208ENST00000506971 BMP2KQ9NSY1 1161 aaPredicted RBP11.85□□□□□ -0.51
CALCOCO2-208ENST00000506971 ATN1P54259 1190 aaPredicted RBP11.84□□□□□ -0.51
CALCOCO2-208ENST00000506971 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
CALCOCO2-208ENST00000506971 TIE1P35590 1138 aa11.82□□□□□ -0.52
CALCOCO2-208ENST00000506971 ZNF467Q7Z7K2 595 aaPredicted RBP11.82□□□□□ -0.52
CALCOCO2-208ENST00000506971 PELP1Q8IZL8 1130 aaKnown RBP11.82□□□□□ -0.52
CALCOCO2-208ENST00000506971 ASTLQ6HA08 431 aaPredicted RBP11.81□□□□□ -0.52
CALCOCO2-208ENST00000506971 TTLL13PA6NNM8 815 aa11.8□□□□□ -0.52
CALCOCO2-208ENST00000506971 CHRM1P11229 460 aaPredicted RBP11.78□□□□□ -0.52
CALCOCO2-208ENST00000506971 TRIM41Q8WV44 630 aa11.77□□□□□ -0.53
CALCOCO2-208ENST00000506971 METRNQ9UJH8 293 aa11.77□□□□□ -0.53
CALCOCO2-208ENST00000506971 TRIM35Q9UPQ4 493 aa11.77□□□□□ -0.53
CALCOCO2-208ENST00000506971 LHX8Q68G74 356 aa11.76□□□□□ -0.53
CALCOCO2-208ENST00000506971 SLC39A7Q92504 469 aa11.76□□□□□ -0.53
CALCOCO2-208ENST00000506971 GOLGA2Q08379 1002 aa11.75□□□□□ -0.53
CALCOCO2-208ENST00000506971 ECM2O94769 699 aaPredicted RBP11.74□□□□□ -0.53
CALCOCO2-208ENST00000506971 SEC24BO95487 1268 aa11.74□□□□□ -0.53
CALCOCO2-208ENST00000506971 PSEN1P49768 467 aa11.74□□□□□ -0.53
CALCOCO2-208ENST00000506971 C7P10643 843 aa11.73□□□□□ -0.53
CALCOCO2-208ENST00000506971 PDAP1Q13442 181 aaKnown RBP11.7□□□□□ -0.54
CALCOCO2-208ENST00000506971 RIOK3O14730 519 aaKnown RBP11.66□□□□□ -0.54
CALCOCO2-208ENST00000506971 MKRN3Q13064 507 aaKnown RBP11.66□□□□□ -0.54
CALCOCO2-208ENST00000506971 CABP2Q9NPB3 220 aa11.64□□□□□ -0.55
CALCOCO2-208ENST00000506971 PLCG2P16885 1265 aa11.63□□□□□ -0.55
CALCOCO2-208ENST00000506971 PKD2Q13563 968 aa11.63□□□□□ -0.55
CALCOCO2-208ENST00000506971 COLQQ9Y215 455 aaPredicted RBP11.61□□□□□ -0.55
CALCOCO2-208ENST00000506971 RNF25Q96BH1 459 aaPredicted RBP11.6□□□□□ -0.55
CALCOCO2-208ENST00000506971 POTEB2H3BUK9 544 aa11.59□□□□□ -0.55
CALCOCO2-208ENST00000506971 IER5LQ5T953 404 aa11.59□□□□□ -0.55
CALCOCO2-208ENST00000506971 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.58□□□□□ -0.56
CALCOCO2-208ENST00000506971 VGFO15240 615 aaPredicted RBP11.58□□□□□ -0.56
CALCOCO2-208ENST00000506971 ZFP91Q96JP5 570 aaPredicted RBP11.58□□□□□ -0.56
CALCOCO2-208ENST00000506971 RGL2O15211 777 aa11.57□□□□□ -0.56
CALCOCO2-208ENST00000506971 TAOK2Q9UL54 1235 aa11.57□□□□□ -0.56
CALCOCO2-208ENST00000506971 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.55□□□□□ -0.565e-7■■■■■ 29.9
CALCOCO2-208ENST00000506971 POTEFA5A3E0 1075 aa11.54□□□□□ -0.56
CALCOCO2-208ENST00000506971 OCEL1Q9H607 264 aa11.54□□□□□ -0.56
CALCOCO2-208ENST00000506971 DCAF8L2P0C7V8 631 aa11.53□□□□□ -0.56
CALCOCO2-208ENST00000506971 STK24Q9Y6E0 443 aa11.53□□□□□ -0.56
CALCOCO2-208ENST00000506971 STK25O00506 426 aa11.52□□□□□ -0.57
CALCOCO2-208ENST00000506971 EFCAB3Q8N7B9 438 aa11.51□□□□□ -0.57
CALCOCO2-208ENST00000506971 BCL11BQ9C0K0 894 aaPredicted RBP11.51□□□□□ -0.57
CALCOCO2-208ENST00000506971 IRX5P78411 483 aaPredicted RBP11.5□□□□□ -0.57
CALCOCO2-208ENST00000506971 SCUBE2Q9NQ36 999 aa11.5□□□□□ -0.57
CALCOCO2-208ENST00000506971 MAMSTRQ6ZN01 415 aa11.49□□□□□ -0.57
CALCOCO2-208ENST00000506971 OTUD5Q96G74 571 aa11.48□□□□□ -0.57
CALCOCO2-208ENST00000506971 POTEJP0CG39 1038 aa11.47□□□□□ -0.57
CALCOCO2-208ENST00000506971 G3V3G9 751 aa11.46□□□□□ -0.57
CALCOCO2-208ENST00000506971 DPY19L2Q6NUT2 758 aa11.42□□□□□ -0.58
CALCOCO2-208ENST00000506971 CHGAP10645 457 aaKnown RBP11.4□□□□□ -0.58
CALCOCO2-208ENST00000506971 PDCD7Q8N8D1 485 aaKnown RBP11.4□□□□□ -0.58
CALCOCO2-208ENST00000506971 L3MBTL3Q96JM7 780 aaPredicted RBP11.39□□□□□ -0.59
CALCOCO2-208ENST00000506971 C3orf67Q6ZVT6 689 aa11.38□□□□□ -0.59
CALCOCO2-208ENST00000506971 PHF8Q9UPP1 1060 aa11.38□□□□□ -0.59
CALCOCO2-208ENST00000506971 SLAIN1Q8ND83 568 aa11.37□□□□□ -0.59
CALCOCO2-208ENST00000506971 SOX12O15370 315 aa11.36□□□□□ -0.59
CALCOCO2-208ENST00000506971 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.36□□□□□ -0.59
CALCOCO2-208ENST00000506971 NLRP6P59044 892 aa11.32□□□□□ -0.6
CALCOCO2-208ENST00000506971 BOLA1Q9Y3E2 137 aa11.32□□□□□ -0.6
CALCOCO2-208ENST00000506971 AMER1Q5JTC6 1135 aaPredicted RBP11.29□□□□□ -0.6
CALCOCO2-208ENST00000506971 FAM163AQ96GL9 167 aaPredicted RBP11.29□□□□□ -0.6
CALCOCO2-208ENST00000506971 RTN4Q9NQC3 1192 aaKnown RBP11.27□□□□□ -0.61
CALCOCO2-208ENST00000506971 HS6ST3Q8IZP7 471 aa11.26□□□□□ -0.61
CALCOCO2-208ENST00000506971 MFRPQ9BY79 579 aa11.26□□□□□ -0.61
CALCOCO2-208ENST00000506971 ILDR1Q86SU0 546 aaPredicted RBP11.25□□□□□ -0.61
CALCOCO2-208ENST00000506971 MS4A4AQ96JQ5 239 aa11.25□□□□□ -0.61
CALCOCO2-208ENST00000506971 MICALL2Q8IY33 904 aa11.21□□□□□ -0.61
CALCOCO2-208ENST00000506971 FBXO22Q8NEZ5 403 aa11.21□□□□□ -0.61
CALCOCO2-208ENST00000506971 SNPHO15079 494 aa11.13□□□□□ -0.63
CALCOCO2-208ENST00000506971 PPP1R37O75864 691 aa11.13□□□□□ -0.63
CALCOCO2-208ENST00000506971 TMEM121BQ9BXQ6 578 aaPredicted RBP11.12□□□□□ -0.63
CALCOCO2-208ENST00000506971 NKX1-1Q15270 411 aaPredicted RBP11.11□□□□□ -0.63
CALCOCO2-208ENST00000506971 ZNF710Q8N1W2 664 aa11.07□□□□□ -0.64
CALCOCO2-208ENST00000506971 RYDENQ9NUL5 291 aaKnown RBP11.07□□□□□ -0.64
CALCOCO2-208ENST00000506971 POTEMA6NI47 508 aa11.06□□□□□ -0.64
CALCOCO2-208ENST00000506971 ST18O60284 1047 aa11.06□□□□□ -0.64
CALCOCO2-208ENST00000506971 POTEGQ6S5H5 508 aa11.06□□□□□ -0.64
CALCOCO2-208ENST00000506971 TMEM92Q6UXU6 159 aa11.06□□□□□ -0.64
CALCOCO2-208ENST00000506971 TMC2Q8TDI7 906 aa11.05□□□□□ -0.64
CALCOCO2-208ENST00000506971 MARVELD3Q96A59 401 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms