RNA–Protein interactions for RNA: ENST00000506847.5

SNX2-204, Transcript of sorting nexin 2, humanhuman

TSL 5

Gene SNX2, Length 798 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-204ENST00000506847 AMER1Q5JTC6 1135 aaPredicted RBP14.02□□□□□ -0.17
SNX2-204ENST00000506847 TRIM41Q8WV44 630 aa14.01□□□□□ -0.17
SNX2-204ENST00000506847 ZNF579Q8NAF0 562 aaKnown RBP13.97□□□□□ -0.17
SNX2-204ENST00000506847 CCDC61Q9Y6R9 512 aa13.97□□□□□ -0.17
SNX2-204ENST00000506847 CLCN6P51797 869 aa13.94□□□□□ -0.18
SNX2-204ENST00000506847 CHRM1P11229 460 aaPredicted RBP13.89□□□□□ -0.19
SNX2-204ENST00000506847 EVX2Q03828 476 aa13.89□□□□□ -0.19
SNX2-204ENST00000506847 PKD2Q13563 968 aa13.87□□□□□ -0.19
SNX2-204ENST00000506847 ECM2O94769 699 aaPredicted RBP13.86□□□□□ -0.19
SNX2-204ENST00000506847 PYGBP11216 843 aa13.86□□□□□ -0.19
SNX2-204ENST00000506847 PHF12Q96QT6 1004 aa13.86□□□□□ -0.19
SNX2-204ENST00000506847 SGIP1Q9BQI5 828 aa13.84□□□□□ -0.19
SNX2-204ENST00000506847 RTN4Q9NQC3 1192 aaKnown RBP13.84□□□□□ -0.19
SNX2-204ENST00000506847 KIF12Q96FN5 646 aa13.83□□□□□ -0.2
SNX2-204ENST00000506847 SP7Q8TDD2 431 aaPredicted RBP13.82□□□□□ -0.2
SNX2-204ENST00000506847 MAP3K13O43283 966 aa13.78□□□□□ -0.2
SNX2-204ENST00000506847 ZNF467Q7Z7K2 595 aaPredicted RBP13.78□□□□□ -0.2
SNX2-204ENST00000506847 PCDHB13Q9Y5F0 798 aa13.78□□□□□ -0.2
SNX2-204ENST00000506847 TAOK2Q9UL54 1235 aa13.74□□□□□ -0.21
SNX2-204ENST00000506847 GABBR2O75899 941 aa13.72□□□□□ -0.21
SNX2-204ENST00000506847 MS4A3Q96HJ5 214 aa13.71□□□□□ -0.21
SNX2-204ENST00000506847 RIOK3O14730 519 aaKnown RBP13.7□□□□□ -0.22
SNX2-204ENST00000506847 IFNL1Q8IU54 200 aa13.69□□□□□ -0.22
SNX2-204ENST00000506847 GALR2O43603 387 aaPredicted RBP13.67□□□□□ -0.22
SNX2-204ENST00000506847 RGL2O15211 777 aa13.66□□□□□ -0.22
SNX2-204ENST00000506847 RNF25Q96BH1 459 aaPredicted RBP13.65□□□□□ -0.22
SNX2-204ENST00000506847 PCDHB8Q9UN66 801 aa13.65□□□□□ -0.22
SNX2-204ENST00000506847 VGFO15240 615 aaPredicted RBP13.64□□□□□ -0.23
SNX2-204ENST00000506847 PDAP1Q13442 181 aaKnown RBP13.63□□□□□ -0.23
SNX2-204ENST00000506847 TIE1P35590 1138 aa13.6□□□□□ -0.23
SNX2-204ENST00000506847 PSEN1P49768 467 aa13.58□□□□□ -0.24
SNX2-204ENST00000506847 DCBLD2Q96PD2 775 aa13.58□□□□□ -0.24
SNX2-204ENST00000506847 DCAF8L2P0C7V8 631 aa13.57□□□□□ -0.24
SNX2-204ENST00000506847 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
SNX2-204ENST00000506847 TRPC6Q9Y210 931 aa13.51□□□□□ -0.25
SNX2-204ENST00000506847 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.5□□□□□ -0.25
SNX2-204ENST00000506847 ZFP91Q96JP5 570 aaPredicted RBP13.5□□□□□ -0.25
SNX2-204ENST00000506847 BMP2KQ9NSY1 1161 aaPredicted RBP13.5□□□□□ -0.25
SNX2-204ENST00000506847 TTLL13PA6NNM8 815 aa13.49□□□□□ -0.25
SNX2-204ENST00000506847 ASTLQ6HA08 431 aaPredicted RBP13.49□□□□□ -0.25
SNX2-204ENST00000506847 STK25O00506 426 aa13.47□□□□□ -0.25
SNX2-204ENST00000506847 ATMINO43313 823 aaPredicted RBP13.46□□□□□ -0.25
SNX2-204ENST00000506847 GOLGA2Q08379 1002 aa13.46□□□□□ -0.25
SNX2-204ENST00000506847 CHGAP10645 457 aaKnown RBP13.44□□□□□ -0.26
SNX2-204ENST00000506847 HS6ST3Q8IZP7 471 aa13.44□□□□□ -0.26
SNX2-204ENST00000506847 BCL11BQ9C0K0 894 aaPredicted RBP13.44□□□□□ -0.26
SNX2-204ENST00000506847 STK24Q9Y6E0 443 aa13.43□□□□□ -0.26
SNX2-204ENST00000506847 ATN1P54259 1190 aaPredicted RBP13.41□□□□□ -0.26
SNX2-204ENST00000506847 TRIM35Q9UPQ4 493 aa13.41□□□□□ -0.26
SNX2-204ENST00000506847 CABP2Q9NPB3 220 aa13.39□□□□□ -0.27
SNX2-204ENST00000506847 MKRN3Q13064 507 aaKnown RBP13.38□□□□□ -0.27
SNX2-204ENST00000506847 POTEIP0CG38 1075 aa13.37□□□□□ -0.27
SNX2-204ENST00000506847 IER5LQ5T953 404 aa13.36□□□□□ -0.27
SNX2-204ENST00000506847 SLC39A7Q92504 469 aa13.36□□□□□ -0.27
SNX2-204ENST00000506847 DNAJC5Q9H3Z4 198 aa13.33□□□□□ -0.28
SNX2-204ENST00000506847 C7P10643 843 aa13.32□□□□□ -0.28
SNX2-204ENST00000506847 SOX12O15370 315 aa13.3□□□□□ -0.28
SNX2-204ENST00000506847 PELP1Q8IZL8 1130 aaKnown RBP13.3□□□□□ -0.28
SNX2-204ENST00000506847 EFCAB3Q8N7B9 438 aa13.29□□□□□ -0.28
SNX2-204ENST00000506847 BBXQ8WY36 941 aaPredicted RBP13.27□□□□□ -0.29
SNX2-204ENST00000506847 METRNQ9UJH8 293 aa13.27□□□□□ -0.29
SNX2-204ENST00000506847 RYDENQ9NUL5 291 aaKnown RBP13.26□□□□□ -0.29
SNX2-204ENST00000506847 SEC24BO95487 1268 aa13.25□□□□□ -0.29
SNX2-204ENST00000506847 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.24□□□□□ -0.291e-6■■■□□ 15.9
SNX2-204ENST00000506847 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.24□□□□□ -0.29
SNX2-204ENST00000506847 PLCG2P16885 1265 aa13.23□□□□□ -0.29
SNX2-204ENST00000506847 NLRP6P59044 892 aa13.23□□□□□ -0.29
SNX2-204ENST00000506847 OCEL1Q9H607 264 aa13.22□□□□□ -0.29
SNX2-204ENST00000506847 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.29
SNX2-204ENST00000506847 ILDR1Q86SU0 546 aaPredicted RBP13.18□□□□□ -0.3
SNX2-204ENST00000506847 MFRPQ9BY79 579 aa13.18□□□□□ -0.3
SNX2-204ENST00000506847 PHF8Q9UPP1 1060 aa13.17□□□□□ -0.3
SNX2-204ENST00000506847 NKX1-1Q15270 411 aaPredicted RBP13.16□□□□□ -0.3
SNX2-204ENST00000506847 FBXO22Q8NEZ5 403 aa13.13□□□□□ -0.31
SNX2-204ENST00000506847 COLQQ9Y215 455 aaPredicted RBP13.13□□□□□ -0.31
SNX2-204ENST00000506847 PDCD7Q8N8D1 485 aaKnown RBP13.12□□□□□ -0.31
SNX2-204ENST00000506847 G3V3G9 751 aa13.09□□□□□ -0.31
SNX2-204ENST00000506847 SPRYD3Q8NCJ5 442 aa13.09□□□□□ -0.31
SNX2-204ENST00000506847 L3MBTL3Q96JM7 780 aaPredicted RBP13.09□□□□□ -0.31
SNX2-204ENST00000506847 POTEFA5A3E0 1075 aa13.08□□□□□ -0.32
SNX2-204ENST00000506847 MS4A4AQ96JQ5 239 aa13.07□□□□□ -0.32
SNX2-204ENST00000506847 GTPBP6O43824 516 aaPredicted RBP13.06□□□□□ -0.32
SNX2-204ENST00000506847 PAXIP1Q6ZW49 1069 aaPredicted RBP13.04□□□□□ -0.32
SNX2-204ENST00000506847 CFAP44Q96MT7 982 aa13.02□□□□□ -0.33
SNX2-204ENST00000506847 BOLA1Q9Y3E2 137 aa13.02□□□□□ -0.33
SNX2-204ENST00000506847 DPY19L2Q6NUT2 758 aa13.01□□□□□ -0.33
SNX2-204ENST00000506847 MAMSTRQ6ZN01 415 aa12.99□□□□□ -0.33
SNX2-204ENST00000506847 PLCB2Q00722 1185 aa12.96□□□□□ -0.33
SNX2-204ENST00000506847 LHX8Q68G74 356 aa12.96□□□□□ -0.33
SNX2-204ENST00000506847 C3orf67Q6ZVT6 689 aa12.95□□□□□ -0.34
SNX2-204ENST00000506847 MICALL2Q8IY33 904 aa12.95□□□□□ -0.34
SNX2-204ENST00000506847 SCUBE2Q9NQ36 999 aa12.95□□□□□ -0.34
SNX2-204ENST00000506847 PPP1R37O75864 691 aa12.94□□□□□ -0.34
SNX2-204ENST00000506847 TMEM121BQ9BXQ6 578 aaPredicted RBP12.94□□□□□ -0.34
SNX2-204ENST00000506847 POTEB2H3BUK9 544 aa12.93□□□□□ -0.34
SNX2-204ENST00000506847 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.91□□□□□ -0.34
SNX2-204ENST00000506847 POTEJP0CG39 1038 aa12.86□□□□□ -0.35
SNX2-204ENST00000506847 TMC2Q8TDI7 906 aa12.79□□□□□ -0.36
SNX2-204ENST00000506847 OTUD5Q96G74 571 aa12.78□□□□□ -0.36
SNX2-204ENST00000506847 SLAIN1Q8ND83 568 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms