RNA–Protein interactions for RNA: ENST00000506626.1

SMAD1-205, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-205ENST00000506626 MS4A3Q96HJ5 214 aa11.94□□□□□ -0.5
SMAD1-205ENST00000506626 METRNQ9UJH8 293 aa11.93□□□□□ -0.5
SMAD1-205ENST00000506626 ATMINO43313 823 aaPredicted RBP11.92□□□□□ -0.5
SMAD1-205ENST00000506626 SLC39A7Q92504 469 aa11.89□□□□□ -0.51
SMAD1-205ENST00000506626 C7P10643 843 aa11.88□□□□□ -0.51
SMAD1-205ENST00000506626 LCE2DQ5TA82 110 aaPredicted RBP11.85□□□□□ -0.51
SMAD1-205ENST00000506626 PCDH10Q9P2E7 1040 aa11.84□□□□□ -0.51
SMAD1-205ENST00000506626 MAMSTRQ6ZN01 415 aa11.8□□□□□ -0.52
SMAD1-205ENST00000506626 CCDC61Q9Y6R9 512 aa11.8□□□□□ -0.52
SMAD1-205ENST00000506626 ATN1P54259 1190 aaPredicted RBP11.78□□□□□ -0.52
SMAD1-205ENST00000506626 PROM2Q8N271 834 aa11.76□□□□□ -0.53
SMAD1-205ENST00000506626 TSPYL2Q9H2G4 693 aaPredicted RBP11.75□□□□□ -0.53
SMAD1-205ENST00000506626 POTEFA5A3E0 1075 aa11.74□□□□□ -0.53
SMAD1-205ENST00000506626 KIF12Q96FN5 646 aa11.73□□□□□ -0.53
SMAD1-205ENST00000506626 SCUBE2Q9NQ36 999 aa11.72□□□□□ -0.53
SMAD1-205ENST00000506626 BMP2KQ9NSY1 1161 aaPredicted RBP11.71□□□□□ -0.53
SMAD1-205ENST00000506626 TRPC6Q9Y210 931 aa11.7□□□□□ -0.54
SMAD1-205ENST00000506626 FAM163AQ96GL9 167 aaPredicted RBP11.67□□□□□ -0.54
SMAD1-205ENST00000506626 TIE1P35590 1138 aa11.64□□□□□ -0.55
SMAD1-205ENST00000506626 MAP3K13O43283 966 aa11.62□□□□□ -0.55
SMAD1-205ENST00000506626 RASEFQ8IZ41 740 aa11.59□□□□□ -0.55
SMAD1-205ENST00000506626 COLQQ9Y215 455 aaPredicted RBP11.59□□□□□ -0.55
SMAD1-205ENST00000506626 TTLL13PA6NNM8 815 aa11.57□□□□□ -0.56
SMAD1-205ENST00000506626 SEC24BO95487 1268 aa11.49□□□□□ -0.57
SMAD1-205ENST00000506626 IER5LQ5T953 404 aa11.49□□□□□ -0.57
SMAD1-205ENST00000506626 CDAN1Q8IWY9 1227 aa11.48□□□□□ -0.57
SMAD1-205ENST00000506626 TRIM35Q9UPQ4 493 aa11.48□□□□□ -0.57
SMAD1-205ENST00000506626 MIER1Q8N108 512 aa11.47□□□□□ -0.57
SMAD1-205ENST00000506626 SGIP1Q9BQI5 828 aa11.47□□□□□ -0.57
SMAD1-205ENST00000506626 PLEKHG5O94827 1062 aa11.46□□□□□ -0.57
SMAD1-205ENST00000506626 PCDHB13Q9Y5F0 798 aa11.42□□□□□ -0.58
SMAD1-205ENST00000506626 ST18O60284 1047 aa11.4□□□□□ -0.58
SMAD1-205ENST00000506626 NUBP1P53384 320 aa11.38□□□□□ -0.59
SMAD1-205ENST00000506626 IFNL1Q8IU54 200 aa11.38□□□□□ -0.59
SMAD1-205ENST00000506626 SLAIN1Q8ND83 568 aa11.38□□□□□ -0.59
SMAD1-205ENST00000506626 FKBP8Q14318 412 aa11.35□□□□□ -0.59
SMAD1-205ENST00000506626 IRX5P78411 483 aaPredicted RBP11.33□□□□□ -0.6
SMAD1-205ENST00000506626 TMEM106CQ9BVX2 250 aa11.33□□□□□ -0.6
SMAD1-205ENST00000506626 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
SMAD1-205ENST00000506626 PLCG2P16885 1265 aa11.3□□□□□ -0.6
SMAD1-205ENST00000506626 ZBTB47Q9UFB7 747 aaPredicted RBP11.29□□□□□ -0.6
SMAD1-205ENST00000506626 MMRN1Q13201 1228 aa11.25□□□□□ -0.61
SMAD1-205ENST00000506626 FAM212AQ96EL1 285 aa11.25□□□□□ -0.61
SMAD1-205ENST00000506626 TMEM121BQ9BXQ6 578 aaPredicted RBP11.25□□□□□ -0.61
SMAD1-205ENST00000506626 SPNS2Q8IVW8 549 aa11.23□□□□□ -0.61
SMAD1-205ENST00000506626 OCEL1Q9H607 264 aa11.21□□□□□ -0.61
SMAD1-205ENST00000506626 SNPHO15079 494 aa11.15□□□□□ -0.62
SMAD1-205ENST00000506626 MARVELD3Q96A59 401 aa11.14□□□□□ -0.63
SMAD1-205ENST00000506626 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.14□□□□□ -0.63
SMAD1-205ENST00000506626 PYGBP11216 843 aa11.12□□□□□ -0.63
SMAD1-205ENST00000506626 PDCD7Q8N8D1 485 aaKnown RBP11.1□□□□□ -0.63
SMAD1-205ENST00000506626 PCDHB8Q9UN66 801 aa11.09□□□□□ -0.63
SMAD1-205ENST00000506626 FBXO3Q9UK99 471 aa11.07□□□□□ -0.64
SMAD1-205ENST00000506626 DCAF8Q5TAQ9 597 aa11.05□□□□□ -0.64
SMAD1-205ENST00000506626 KRTAP3-3Q9BYR6 98 aa11.03□□□□□ -0.64
SMAD1-205ENST00000506626 KRTAP3-2Q9BYR7 98 aa11.03□□□□□ -0.64
SMAD1-205ENST00000506626 POTEB3A0JP26 581 aa11.02□□□□□ -0.65
SMAD1-205ENST00000506626 POTEBQ6S5H4 581 aa11.02□□□□□ -0.65
SMAD1-205ENST00000506626 EMP3P54852 163 aa11.01□□□□□ -0.65
SMAD1-205ENST00000506626 C3orf67Q6ZVT6 689 aa11.01□□□□□ -0.65
SMAD1-205ENST00000506626 HS3ST6Q96QI5 342 aa10.98□□□□□ -0.65
SMAD1-205ENST00000506626 L3MBTL3Q96JM7 780 aaPredicted RBP10.97□□□□□ -0.65
SMAD1-205ENST00000506626 VASPP50552 380 aaPredicted RBP10.95□□□□□ -0.66
SMAD1-205ENST00000506626 ZNF467Q7Z7K2 595 aaPredicted RBP10.95□□□□□ -0.66
SMAD1-205ENST00000506626 ILDR1Q86SU0 546 aaPredicted RBP10.95□□□□□ -0.66
SMAD1-205ENST00000506626 MKRN3Q13064 507 aaKnown RBP10.94□□□□□ -0.66
SMAD1-205ENST00000506626 FAM205CA6NFA0 338 aa10.93□□□□□ -0.66
SMAD1-205ENST00000506626 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMAD1-205ENST00000506626 GOLGA2Q08379 1002 aa10.9□□□□□ -0.66
SMAD1-205ENST00000506626 CHRM1P11229 460 aaPredicted RBP10.89□□□□□ -0.67
SMAD1-205ENST00000506626 GSE1Q14687 1217 aa10.88□□□□□ -0.67
SMAD1-205ENST00000506626 PSEN1P49768 467 aa10.87□□□□□ -0.67
SMAD1-205ENST00000506626 HOXB3P14651 431 aaPredicted RBP10.86□□□□□ -0.67
SMAD1-205ENST00000506626 KLHL34Q8N239 644 aa10.85□□□□□ -0.67
SMAD1-205ENST00000506626 DPY19L2Q6NUT2 758 aa10.84□□□□□ -0.67
SMAD1-205ENST00000506626 PDAP1Q13442 181 aaKnown RBP10.79□□□□□ -0.68
SMAD1-205ENST00000506626 BOLA1Q9Y3E2 137 aa10.79□□□□□ -0.68
SMAD1-205ENST00000506626 HOXB1P14653 301 aaPredicted RBP10.78□□□□□ -0.68
SMAD1-205ENST00000506626 IFNLR1Q8IU57 520 aaPredicted RBP10.75□□□□□ -0.69
SMAD1-205ENST00000506626 CABP2Q9NPB3 220 aa10.73□□□□□ -0.69
SMAD1-205ENST00000506626 SPOCK2Q92563 424 aa10.71□□□□□ -0.69
SMAD1-205ENST00000506626 ERBB3P21860 1342 aa10.7□□□□□ -0.7
SMAD1-205ENST00000506626 DOK7Q18PE1 504 aa10.7□□□□□ -0.7
SMAD1-205ENST00000506626 ZNF710Q8N1W2 664 aa10.7□□□□□ -0.7
SMAD1-205ENST00000506626 RNF166Q96A37 237 aaPredicted RBP10.7□□□□□ -0.7
SMAD1-205ENST00000506626 G3V3G9 751 aa10.69□□□□□ -0.7
SMAD1-205ENST00000506626 VARS2Q5ST30 1063 aaKnown RBP10.65□□□□□ -0.7
SMAD1-205ENST00000506626 MYT1LQ9UL68 1186 aa10.62□□□□□ -0.71
SMAD1-205ENST00000506626 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
SMAD1-205ENST00000506626 RIMBP2O15034 1052 aa10.61□□□□□ -0.71
SMAD1-205ENST00000506626 TMEM92Q6UXU6 159 aa10.61□□□□□ -0.71
SMAD1-205ENST00000506626 ZNF687Q8N1G0 1237 aa10.6□□□□□ -0.71
SMAD1-205ENST00000506626 ZSWIM6Q9HCJ5 1215 aa10.6□□□□□ -0.71
SMAD1-205ENST00000506626 EFCAB3Q8N7B9 438 aa10.58□□□□□ -0.72
SMAD1-205ENST00000506626 GPR153Q6NV75 609 aa10.57□□□□□ -0.72
SMAD1-205ENST00000506626 MICALL2Q8IY33 904 aa10.57□□□□□ -0.72
SMAD1-205ENST00000506626 PTGER2P43116 358 aa10.53□□□□□ -0.72
SMAD1-205ENST00000506626 TRIM41Q8WV44 630 aa10.5□□□□□ -0.73
SMAD1-205ENST00000506626 MS4A4AQ96JQ5 239 aa10.49□□□□□ -0.73
SMAD1-205ENST00000506626 ARSIQ5FYB1 569 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms