RNA–Protein interactions for RNA: ENST00000506611.1

TRIO-208, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-208ENST00000506611 GALR2O43603 387 aaPredicted RBP13.36□□□□□ -0.27
TRIO-208ENST00000506611 POTEIP0CG38 1075 aa13.32□□□□□ -0.28
TRIO-208ENST00000506611 KLHL34Q8N239 644 aa13.32□□□□□ -0.28
TRIO-208ENST00000506611 CLCN6P51797 869 aa13.3□□□□□ -0.28
TRIO-208ENST00000506611 KIF12Q96FN5 646 aa13.28□□□□□ -0.28
TRIO-208ENST00000506611 MS4A3Q96HJ5 214 aa13.27□□□□□ -0.29
TRIO-208ENST00000506611 FAM212AQ96EL1 285 aa13.26□□□□□ -0.29
TRIO-208ENST00000506611 MAP3K13O43283 966 aa13.23□□□□□ -0.29
TRIO-208ENST00000506611 DCAF8Q5TAQ9 597 aa13.2□□□□□ -0.3
TRIO-208ENST00000506611 SPOCK2Q92563 424 aa13.2□□□□□ -0.3
TRIO-208ENST00000506611 TRPC6Q9Y210 931 aa13.17□□□□□ -0.3
TRIO-208ENST00000506611 PYGBP11216 843 aa13.15□□□□□ -0.3
TRIO-208ENST00000506611 DCBLD2Q96PD2 775 aa13.15□□□□□ -0.3
TRIO-208ENST00000506611 GSE1Q14687 1217 aa13.1□□□□□ -0.31
TRIO-208ENST00000506611 IFNL1Q8IU54 200 aa13.1□□□□□ -0.31
TRIO-208ENST00000506611 PELP1Q8IZL8 1130 aaKnown RBP13.1□□□□□ -0.31
TRIO-208ENST00000506611 PCDHB13Q9Y5F0 798 aa13.1□□□□□ -0.31
TRIO-208ENST00000506611 SGIP1Q9BQI5 828 aa13.08□□□□□ -0.32
TRIO-208ENST00000506611 ATMINO43313 823 aaPredicted RBP13.07□□□□□ -0.32
TRIO-208ENST00000506611 ASTLQ6HA08 431 aaPredicted RBP13.07□□□□□ -0.32
TRIO-208ENST00000506611 BMP2KQ9NSY1 1161 aaPredicted RBP13.06□□□□□ -0.32
TRIO-208ENST00000506611 CIZ1Q9ULV3 898 aaPredicted RBP13.05□□□□□ -0.32
TRIO-208ENST00000506611 ATN1P54259 1190 aaPredicted RBP13.02□□□□□ -0.33
TRIO-208ENST00000506611 CHRM1P11229 460 aaPredicted RBP13.01□□□□□ -0.33
TRIO-208ENST00000506611 PCDHB8Q9UN66 801 aa13.01□□□□□ -0.33
TRIO-208ENST00000506611 TTLL13PA6NNM8 815 aa12.99□□□□□ -0.33
TRIO-208ENST00000506611 TIE1P35590 1138 aa12.99□□□□□ -0.33
TRIO-208ENST00000506611 POTEB2H3BUK9 544 aa12.9□□□□□ -0.34
TRIO-208ENST00000506611 LHX8Q68G74 356 aa12.9□□□□□ -0.34
TRIO-208ENST00000506611 TMEM106CQ9BVX2 250 aa12.9□□□□□ -0.34
TRIO-208ENST00000506611 METRNQ9UJH8 293 aa12.89□□□□□ -0.35
TRIO-208ENST00000506611 ZNF467Q7Z7K2 595 aaPredicted RBP12.88□□□□□ -0.35
TRIO-208ENST00000506611 TRIM35Q9UPQ4 493 aa12.88□□□□□ -0.35
TRIO-208ENST00000506611 POTEFA5A3E0 1075 aa12.87□□□□□ -0.35
TRIO-208ENST00000506611 SLC39A7Q92504 469 aa12.87□□□□□ -0.35
TRIO-208ENST00000506611 RNF25Q96BH1 459 aaPredicted RBP12.87□□□□□ -0.35
TRIO-208ENST00000506611 C7P10643 843 aa12.85□□□□□ -0.35
TRIO-208ENST00000506611 PKD2Q13563 968 aa12.83□□□□□ -0.36
TRIO-208ENST00000506611 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
TRIO-208ENST00000506611 PSEN1P49768 467 aa12.81□□□□□ -0.36
TRIO-208ENST00000506611 COLQQ9Y215 455 aaPredicted RBP12.81□□□□□ -0.36
TRIO-208ENST00000506611 POTEJP0CG39 1038 aa12.8□□□□□ -0.36
TRIO-208ENST00000506611 PDAP1Q13442 181 aaKnown RBP12.77□□□□□ -0.37
TRIO-208ENST00000506611 IER5LQ5T953 404 aa12.75□□□□□ -0.37
TRIO-208ENST00000506611 RIOK3O14730 519 aaKnown RBP12.73□□□□□ -0.37
TRIO-208ENST00000506611 IRX5P78411 483 aaPredicted RBP12.72□□□□□ -0.37
TRIO-208ENST00000506611 ECM2O94769 699 aaPredicted RBP12.71□□□□□ -0.37
TRIO-208ENST00000506611 OTUD5Q96G74 571 aa12.71□□□□□ -0.37
TRIO-208ENST00000506611 RGL2O15211 777 aa12.69□□□□□ -0.38
TRIO-208ENST00000506611 SEC24BO95487 1268 aa12.68□□□□□ -0.38
TRIO-208ENST00000506611 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.66□□□□□ -0.38
TRIO-208ENST00000506611 ZFP91Q96JP5 570 aaPredicted RBP12.66□□□□□ -0.38
TRIO-208ENST00000506611 CABP2Q9NPB3 220 aa12.66□□□□□ -0.38
TRIO-208ENST00000506611 VGFO15240 615 aaPredicted RBP12.64□□□□□ -0.39
TRIO-208ENST00000506611 PDCD7Q8N8D1 485 aaKnown RBP12.63□□□□□ -0.39
TRIO-208ENST00000506611 OCEL1Q9H607 264 aa12.62□□□□□ -0.39
TRIO-208ENST00000506611 PLCG2P16885 1265 aa12.61□□□□□ -0.39
TRIO-208ENST00000506611 ILDR1Q86SU0 546 aaPredicted RBP12.61□□□□□ -0.39
TRIO-208ENST00000506611 GOLGA2Q08379 1002 aa12.6□□□□□ -0.39
TRIO-208ENST00000506611 MKRN3Q13064 507 aaKnown RBP12.6□□□□□ -0.39
TRIO-208ENST00000506611 EFCAB3Q8N7B9 438 aa12.58□□□□□ -0.4
TRIO-208ENST00000506611 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.56□□□□□ -0.42e-7■□□□□ 10.5
TRIO-208ENST00000506611 BCL11BQ9C0K0 894 aaPredicted RBP12.54□□□□□ -0.4
TRIO-208ENST00000506611 DPY19L2Q6NUT2 758 aa12.53□□□□□ -0.4
TRIO-208ENST00000506611 MAMSTRQ6ZN01 415 aa12.5□□□□□ -0.41
TRIO-208ENST00000506611 STK25O00506 426 aa12.49□□□□□ -0.41
TRIO-208ENST00000506611 SCUBE2Q9NQ36 999 aa12.49□□□□□ -0.41
TRIO-208ENST00000506611 STK24Q9Y6E0 443 aa12.48□□□□□ -0.41
TRIO-208ENST00000506611 MS4A4AQ96JQ5 239 aa12.46□□□□□ -0.41
TRIO-208ENST00000506611 TAOK2Q9UL54 1235 aa12.46□□□□□ -0.41
TRIO-208ENST00000506611 PHF8Q9UPP1 1060 aa12.45□□□□□ -0.42
TRIO-208ENST00000506611 SOX12O15370 315 aa12.42□□□□□ -0.42
TRIO-208ENST00000506611 FBXO22Q8NEZ5 403 aa12.41□□□□□ -0.42
TRIO-208ENST00000506611 MFRPQ9BY79 579 aa12.41□□□□□ -0.42
TRIO-208ENST00000506611 L3MBTL3Q96JM7 780 aaPredicted RBP12.38□□□□□ -0.43
TRIO-208ENST00000506611 HS6ST3Q8IZP7 471 aa12.37□□□□□ -0.43
TRIO-208ENST00000506611 SLAIN1Q8ND83 568 aa12.36□□□□□ -0.43
TRIO-208ENST00000506611 BOLA1Q9Y3E2 137 aa12.36□□□□□ -0.43
TRIO-208ENST00000506611 TMEM121BQ9BXQ6 578 aaPredicted RBP12.35□□□□□ -0.43
TRIO-208ENST00000506611 CHGAP10645 457 aaKnown RBP12.33□□□□□ -0.44
TRIO-208ENST00000506611 LCE2DQ5TA82 110 aaPredicted RBP12.33□□□□□ -0.44
TRIO-208ENST00000506611 NLRP6P59044 892 aa12.32□□□□□ -0.44
TRIO-208ENST00000506611 RTN4Q9NQC3 1192 aaKnown RBP12.32□□□□□ -0.44
TRIO-208ENST00000506611 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.32□□□□□ -0.44
TRIO-208ENST00000506611 C3orf67Q6ZVT6 689 aa12.31□□□□□ -0.44
TRIO-208ENST00000506611 MICALL2Q8IY33 904 aa12.3□□□□□ -0.44
TRIO-208ENST00000506611 NKX1-1Q15270 411 aaPredicted RBP12.28□□□□□ -0.44
TRIO-208ENST00000506611 DNAJC5Q9H3Z4 198 aa12.26□□□□□ -0.45
TRIO-208ENST00000506611 TMEM92Q6UXU6 159 aa12.25□□□□□ -0.45
TRIO-208ENST00000506611 PPP1R37O75864 691 aa12.24□□□□□ -0.45
TRIO-208ENST00000506611 AMER1Q5JTC6 1135 aaPredicted RBP12.24□□□□□ -0.45
TRIO-208ENST00000506611 G3V3G9 751 aa12.22□□□□□ -0.45
TRIO-208ENST00000506611 FAM163AQ96GL9 167 aaPredicted RBP12.22□□□□□ -0.45
TRIO-208ENST00000506611 DCAF8L2P0C7V8 631 aa12.19□□□□□ -0.46
TRIO-208ENST00000506611 ST18O60284 1047 aa12.15□□□□□ -0.46
TRIO-208ENST00000506611 POTEMA6NI47 508 aa12.13□□□□□ -0.47
TRIO-208ENST00000506611 HOXB3P14651 431 aaPredicted RBP12.12□□□□□ -0.47
TRIO-208ENST00000506611 POTEGQ6S5H5 508 aa12.11□□□□□ -0.47
TRIO-208ENST00000506611 KIF3CO14782 793 aa12.09□□□□□ -0.47
TRIO-208ENST00000506611 GTPBP6O43824 516 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms