RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 CHGAP10645 457 aaKnown RBP14.44□□□□□ -0.1
HERC4-213ENST00000506515 HAP1P54257 671 aaPredicted RBP14.44□□□□□ -0.1
HERC4-213ENST00000506515 RNF25Q96BH1 459 aaPredicted RBP14.42□□□□□ -0.1
HERC4-213ENST00000506515 PRKAR2AP13861 404 aaKnown RBP14.39□□□□□ -0.11
HERC4-213ENST00000506515 FARP1Q9Y4F1 1045 aaPredicted RBP14.38□□□□□ -0.11
HERC4-213ENST00000506515 PAXIP1Q6ZW49 1069 aaPredicted RBP14.37□□□□□ -0.11
HERC4-213ENST00000506515 CFAP44Q96MT7 982 aa14.36□□□□□ -0.11
HERC4-213ENST00000506515 RIOK3O14730 519 aaKnown RBP14.34□□□□□ -0.11
HERC4-213ENST00000506515 PYGBP11216 843 aa14.34□□□□□ -0.11
HERC4-213ENST00000506515 FXR2P51116 673 aaKnown RBP eCLIP14.34□□□□□ -0.11
HERC4-213ENST00000506515 TSPYL2Q9H2G4 693 aaPredicted RBP14.33□□□□□ -0.12
HERC4-213ENST00000506515 CHRM1P11229 460 aaPredicted RBP14.32□□□□□ -0.12
HERC4-213ENST00000506515 CHRDL2Q6WN34 429 aa14.32□□□□□ -0.12
HERC4-213ENST00000506515 TAOK2Q9UL54 1235 aa14.3□□□□□ -0.12
HERC4-213ENST00000506515 HS6ST3Q8IZP7 471 aa14.29□□□□□ -0.12
HERC4-213ENST00000506515 SPRYD3Q8NCJ5 442 aa14.27□□□□□ -0.13
HERC4-213ENST00000506515 PIP4P2Q8N4L2 257 aa14.25□□□□□ -0.13
HERC4-213ENST00000506515 VGFO15240 615 aaPredicted RBP14.24□□□□□ -0.13
HERC4-213ENST00000506515 STK25O00506 426 aa14.21□□□□□ -0.13
HERC4-213ENST00000506515 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.16□□□□□ -0.14
HERC4-213ENST00000506515 ZFP91Q96JP5 570 aaPredicted RBP14.16□□□□□ -0.14
HERC4-213ENST00000506515 VSIG10Q8N0Z9 540 aa14.15□□□□□ -0.14
HERC4-213ENST00000506515 CCDC61Q9Y6R9 512 aa14.14□□□□□ -0.15
HERC4-213ENST00000506515 PAK3O75914 559 aaPredicted RBP14.13□□□□□ -0.15
HERC4-213ENST00000506515 BCL11BQ9C0K0 894 aaPredicted RBP14.13□□□□□ -0.15
HERC4-213ENST00000506515 DNAJC5Q9H3Z4 198 aa14.13□□□□□ -0.15
HERC4-213ENST00000506515 STK24Q9Y6E0 443 aa14.13□□□□□ -0.15
HERC4-213ENST00000506515 NKX1-1Q15270 411 aaPredicted RBP14.12□□□□□ -0.15
HERC4-213ENST00000506515 SGIP1Q9BQI5 828 aa14.12□□□□□ -0.15
HERC4-213ENST00000506515 ZNF467Q7Z7K2 595 aaPredicted RBP14.1□□□□□ -0.15
HERC4-213ENST00000506515 TSHZ2Q9NRE2 1034 aa14.1□□□□□ -0.15
HERC4-213ENST00000506515 PCDHB8Q9UN66 801 aa14.08□□□□□ -0.16
HERC4-213ENST00000506515 PCDHB13Q9Y5F0 798 aa14.08□□□□□ -0.16
HERC4-213ENST00000506515 KDM2AQ9Y2K7 1162 aa14.06□□□□□ -0.16
HERC4-213ENST00000506515 GTPBP6O43824 516 aaPredicted RBP14.02□□□□□ -0.17
HERC4-213ENST00000506515 PDAP1Q13442 181 aaKnown RBP14.02□□□□□ -0.17
HERC4-213ENST00000506515 CD44P16070 742 aaKnown RBP14□□□□□ -0.17
HERC4-213ENST00000506515 ZNF579Q8NAF0 562 aaKnown RBP14□□□□□ -0.17
HERC4-213ENST00000506515 ZRANB1Q9UGI0 708 aa14□□□□□ -0.17
HERC4-213ENST00000506515 MAP3K13O43283 966 aa13.98□□□□□ -0.17
HERC4-213ENST00000506515 PSEN1P49768 467 aa13.97□□□□□ -0.17
HERC4-213ENST00000506515 KIF12Q96FN5 646 aa13.97□□□□□ -0.17
HERC4-213ENST00000506515 IFNL1Q8IU54 200 aa13.96□□□□□ -0.17
HERC4-213ENST00000506515 PHF12Q96QT6 1004 aa13.91□□□□□ -0.18
HERC4-213ENST00000506515 RYDENQ9NUL5 291 aaKnown RBP13.91□□□□□ -0.18
HERC4-213ENST00000506515 BCANQ96GW7 911 aa13.87□□□□□ -0.19
HERC4-213ENST00000506515 C19orf67A6NJJ6 358 aa13.83□□□□□ -0.2
HERC4-213ENST00000506515 CABP2Q9NPB3 220 aa13.81□□□□□ -0.2
HERC4-213ENST00000506515 EFCAB3Q8N7B9 438 aa13.78□□□□□ -0.2
HERC4-213ENST00000506515 MFRPQ9BY79 579 aa13.78□□□□□ -0.2
HERC4-213ENST00000506515 MS4A3Q96HJ5 214 aa13.75□□□□□ -0.21
HERC4-213ENST00000506515 TMEM106CQ9BVX2 250 aa13.71□□□□□ -0.21
HERC4-213ENST00000506515 TRPC6Q9Y210 931 aa13.71□□□□□ -0.21
HERC4-213ENST00000506515 HAX1O00165 279 aa13.7□□□□□ -0.22
HERC4-213ENST00000506515 SOX12O15370 315 aa13.7□□□□□ -0.22
HERC4-213ENST00000506515 PHF8Q9UPP1 1060 aa13.7□□□□□ -0.22
HERC4-213ENST00000506515 NLRP6P59044 892 aa13.69□□□□□ -0.22
HERC4-213ENST00000506515 GOLGA2Q08379 1002 aa13.68□□□□□ -0.22
HERC4-213ENST00000506515 FBXO22Q8NEZ5 403 aa13.67□□□□□ -0.22
HERC4-213ENST00000506515 PPP1R37O75864 691 aa13.65□□□□□ -0.22
HERC4-213ENST00000506515 CADPS2Q86UW7 1296 aa13.64□□□□□ -0.23
HERC4-213ENST00000506515 EVX2Q03828 476 aa13.61□□□□□ -0.23
HERC4-213ENST00000506515 NBR1Q14596 966 aa13.6□□□□□ -0.23
HERC4-213ENST00000506515 GALR2O43603 387 aaPredicted RBP13.59□□□□□ -0.23
HERC4-213ENST00000506515 MKRN3Q13064 507 aaKnown RBP13.59□□□□□ -0.23
HERC4-213ENST00000506515 TIE1P35590 1138 aa13.58□□□□□ -0.24
HERC4-213ENST00000506515 TTLL13PA6NNM8 815 aa13.57□□□□□ -0.24
HERC4-213ENST00000506515 MS4A4AQ96JQ5 239 aa13.56□□□□□ -0.24
HERC4-213ENST00000506515 WDR70Q9NW82 654 aa13.56□□□□□ -0.24
HERC4-213ENST00000506515 BMP2KQ9NSY1 1161 aaPredicted RBP13.55□□□□□ -0.24
HERC4-213ENST00000506515 SP7Q8TDD2 431 aaPredicted RBP13.52□□□□□ -0.25
HERC4-213ENST00000506515 PRKCSHP14314 528 aaPredicted RBP13.51□□□□□ -0.25
HERC4-213ENST00000506515 TRIM35Q9UPQ4 493 aa13.5□□□□□ -0.25
HERC4-213ENST00000506515 CLCN6P51797 869 aa13.49□□□□□ -0.25
HERC4-213ENST00000506515 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.47□□□□□ -0.257e-7■■□□□ 12
HERC4-213ENST00000506515 P3H3Q8IVL6 736 aa13.46□□□□□ -0.25
HERC4-213ENST00000506515 TPRNQ4KMQ1 711 aa13.45□□□□□ -0.26
HERC4-213ENST00000506515 ATN1P54259 1190 aaPredicted RBP13.42□□□□□ -0.26
HERC4-213ENST00000506515 KCNV2Q8TDN2 545 aa13.42□□□□□ -0.26
HERC4-213ENST00000506515 ILDR1Q86SU0 546 aaPredicted RBP13.39□□□□□ -0.27
HERC4-213ENST00000506515 NCKAP5LQ9HCH0 1330 aa13.39□□□□□ -0.27
HERC4-213ENST00000506515 ATMINO43313 823 aaPredicted RBP13.38□□□□□ -0.27
HERC4-213ENST00000506515 LARP6Q9BRS8 491 aaKnown RBP13.38□□□□□ -0.27
HERC4-213ENST00000506515 PDE4AP27815 886 aa13.37□□□□□ -0.27
HERC4-213ENST00000506515 DPY19L2Q6NUT2 758 aa13.36□□□□□ -0.27
HERC4-213ENST00000506515 GABBR2O75899 941 aa13.35□□□□□ -0.27
HERC4-213ENST00000506515 ASTLQ6HA08 431 aaPredicted RBP13.35□□□□□ -0.27
HERC4-213ENST00000506515 E2F4Q16254 413 aa13.34□□□□□ -0.27
HERC4-213ENST00000506515 CRISPLD2Q9H0B8 497 aa13.32□□□□□ -0.28
HERC4-213ENST00000506515 PDCD7Q8N8D1 485 aaKnown RBP13.3□□□□□ -0.28
HERC4-213ENST00000506515 DDX27Q96GQ7 796 aaKnown RBP13.3□□□□□ -0.28
HERC4-213ENST00000506515 IRX5P78411 483 aaPredicted RBP13.29□□□□□ -0.28
HERC4-213ENST00000506515 MFSD10Q14728 455 aa13.28□□□□□ -0.28
HERC4-213ENST00000506515 OCEL1Q9H607 264 aa13.28□□□□□ -0.28
HERC4-213ENST00000506515 IER5LQ5T953 404 aa13.27□□□□□ -0.29
HERC4-213ENST00000506515 DCBLD2Q96PD2 775 aa13.27□□□□□ -0.29
HERC4-213ENST00000506515 ARHGEF1Q92888 912 aaKnown RBP13.26□□□□□ -0.29
HERC4-213ENST00000506515 MICALL2Q8IY33 904 aa13.25□□□□□ -0.29
HERC4-213ENST00000506515 PLCG2P16885 1265 aa13.23□□□□□ -0.29
HERC4-213ENST00000506515 G3V3G9 751 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms