RNA–Protein interactions for RNA: ENST00000506441.1

RETREG1-203, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-203ENST00000506441 RASEFQ8IZ41 740 aa18.33■□□□□ 0.52
RETREG1-203ENST00000506441 PAK3O75914 559 aaPredicted RBP18.29■□□□□ 0.52
RETREG1-203ENST00000506441 PIP4P2Q8N4L2 257 aa18.29■□□□□ 0.52
RETREG1-203ENST00000506441 CHRM1P11229 460 aaPredicted RBP18.28■□□□□ 0.52
RETREG1-203ENST00000506441 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.27■□□□□ 0.52
RETREG1-203ENST00000506441 TSPYL2Q9H2G4 693 aaPredicted RBP18.23■□□□□ 0.51
RETREG1-203ENST00000506441 BBXQ8WY36 941 aaPredicted RBP18.22■□□□□ 0.51
RETREG1-203ENST00000506441 RIOK3O14730 519 aaKnown RBP18.2■□□□□ 0.5
RETREG1-203ENST00000506441 CHGAP10645 457 aaKnown RBP18.16■□□□□ 0.5
RETREG1-203ENST00000506441 PYGBP11216 843 aa18.15■□□□□ 0.5
RETREG1-203ENST00000506441 PLCB2Q00722 1185 aa18.15■□□□□ 0.5
RETREG1-203ENST00000506441 VGFO15240 615 aaPredicted RBP18.11■□□□□ 0.49
RETREG1-203ENST00000506441 ZNF467Q7Z7K2 595 aaPredicted RBP18.06■□□□□ 0.48
RETREG1-203ENST00000506441 RNF25Q96BH1 459 aaPredicted RBP18.05■□□□□ 0.48
RETREG1-203ENST00000506441 HS6ST3Q8IZP7 471 aa18.04■□□□□ 0.48
RETREG1-203ENST00000506441 CCDC61Q9Y6R9 512 aa18■□□□□ 0.47
RETREG1-203ENST00000506441 SGIP1Q9BQI5 828 aa17.99■□□□□ 0.47
RETREG1-203ENST00000506441 STK25O00506 426 aa17.97■□□□□ 0.47
RETREG1-203ENST00000506441 CD44P16070 742 aaKnown RBP17.97■□□□□ 0.47
RETREG1-203ENST00000506441 SPRYD3Q8NCJ5 442 aa17.97■□□□□ 0.47
RETREG1-203ENST00000506441 PAXIP1Q6ZW49 1069 aaPredicted RBP17.96■□□□□ 0.47
RETREG1-203ENST00000506441 ZRANB1Q9UGI0 708 aa17.95■□□□□ 0.46
RETREG1-203ENST00000506441 HAP1P54257 671 aaPredicted RBP17.94■□□□□ 0.46
RETREG1-203ENST00000506441 CFAP44Q96MT7 982 aa17.94■□□□□ 0.46
RETREG1-203ENST00000506441 ZNF579Q8NAF0 562 aaKnown RBP17.91■□□□□ 0.46
RETREG1-203ENST00000506441 DNAJC5Q9H3Z4 198 aa17.91■□□□□ 0.46
RETREG1-203ENST00000506441 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.88■□□□□ 0.45
RETREG1-203ENST00000506441 PDAP1Q13442 181 aaKnown RBP17.88■□□□□ 0.45
RETREG1-203ENST00000506441 ZFP91Q96JP5 570 aaPredicted RBP17.88■□□□□ 0.45
RETREG1-203ENST00000506441 PCDHB13Q9Y5F0 798 aa17.88■□□□□ 0.45
RETREG1-203ENST00000506441 STK24Q9Y6E0 443 aa17.88■□□□□ 0.45
RETREG1-203ENST00000506441 BCL11BQ9C0K0 894 aaPredicted RBP17.85■□□□□ 0.45
RETREG1-203ENST00000506441 RYDENQ9NUL5 291 aaKnown RBP17.85■□□□□ 0.45
RETREG1-203ENST00000506441 KIF12Q96FN5 646 aa17.83■□□□□ 0.44
RETREG1-203ENST00000506441 PCDHB8Q9UN66 801 aa17.81■□□□□ 0.44
RETREG1-203ENST00000506441 C19orf67A6NJJ6 358 aa17.79■□□□□ 0.44
RETREG1-203ENST00000506441 MAP3K13O43283 966 aa17.79■□□□□ 0.44
RETREG1-203ENST00000506441 PSEN1P49768 467 aa17.77■□□□□ 0.44
RETREG1-203ENST00000506441 IFNL1Q8IU54 200 aa17.73■□□□□ 0.43
RETREG1-203ENST00000506441 VSIG10Q8N0Z9 540 aa17.73■□□□□ 0.43
RETREG1-203ENST00000506441 HAX1O00165 279 aa17.71■□□□□ 0.43
RETREG1-203ENST00000506441 CLCN6P51797 869 aa17.7■□□□□ 0.42
RETREG1-203ENST00000506441 PHF12Q96QT6 1004 aa17.69■□□□□ 0.42
RETREG1-203ENST00000506441 NKX1-1Q15270 411 aaPredicted RBP17.62■□□□□ 0.41
RETREG1-203ENST00000506441 GTPBP6O43824 516 aaPredicted RBP17.59■□□□□ 0.41
RETREG1-203ENST00000506441 GOLGA2Q08379 1002 aa17.59■□□□□ 0.41
RETREG1-203ENST00000506441 CABP2Q9NPB3 220 aa17.53■□□□□ 0.4
RETREG1-203ENST00000506441 SOX12O15370 315 aa17.52■□□□□ 0.4
RETREG1-203ENST00000506441 MS4A3Q96HJ5 214 aa17.52■□□□□ 0.4
RETREG1-203ENST00000506441 TSHZ2Q9NRE2 1034 aa17.52■□□□□ 0.4
RETREG1-203ENST00000506441 TMEM106CQ9BVX2 250 aa17.49■□□□□ 0.39
RETREG1-203ENST00000506441 NLRP6P59044 892 aa17.48■□□□□ 0.39
RETREG1-203ENST00000506441 TIE1P35590 1138 aa17.46■□□□□ 0.39
RETREG1-203ENST00000506441 EFCAB3Q8N7B9 438 aa17.45■□□□□ 0.38
RETREG1-203ENST00000506441 MKRN3Q13064 507 aaKnown RBP17.43■□□□□ 0.38
RETREG1-203ENST00000506441 POTEHQ6S545 545 aa17.39■□□□□ 0.37
RETREG1-203ENST00000506441 MFRPQ9BY79 579 aa17.37■□□□□ 0.37
RETREG1-203ENST00000506441 KDM2AQ9Y2K7 1162 aa17.35■□□□□ 0.37
RETREG1-203ENST00000506441 GALR2O43603 387 aaPredicted RBP17.33■□□□□ 0.36
RETREG1-203ENST00000506441 TTLL13PA6NNM8 815 aa17.32■□□□□ 0.36
RETREG1-203ENST00000506441 EVX2Q03828 476 aa17.32■□□□□ 0.36
RETREG1-203ENST00000506441 PHF8Q9UPP1 1060 aa17.31■□□□□ 0.36
RETREG1-203ENST00000506441 TRPC6Q9Y210 931 aa17.31■□□□□ 0.36
RETREG1-203ENST00000506441 BMP2KQ9NSY1 1161 aaPredicted RBP17.28■□□□□ 0.36
RETREG1-203ENST00000506441 BCANQ96GW7 911 aa17.27■□□□□ 0.36
RETREG1-203ENST00000506441 FBXO22Q8NEZ5 403 aa17.26■□□□□ 0.35
RETREG1-203ENST00000506441 WDR70Q9NW82 654 aa17.23■□□□□ 0.35
RETREG1-203ENST00000506441 TRIM35Q9UPQ4 493 aa17.23■□□□□ 0.35
RETREG1-203ENST00000506441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.2■□□□□ 0.34
RETREG1-203ENST00000506441 GABBR2O75899 941 aa17.19■□□□□ 0.34
RETREG1-203ENST00000506441 DCBLD2Q96PD2 775 aa17.18■□□□□ 0.34
RETREG1-203ENST00000506441 ATMINO43313 823 aaPredicted RBP17.13■□□□□ 0.33
RETREG1-203ENST00000506441 IER5LQ5T953 404 aa17.13■□□□□ 0.33
RETREG1-203ENST00000506441 ASTLQ6HA08 431 aaPredicted RBP17.13■□□□□ 0.33
RETREG1-203ENST00000506441 PPP1R37O75864 691 aa17.12■□□□□ 0.33
RETREG1-203ENST00000506441 ATN1P54259 1190 aaPredicted RBP17.11■□□□□ 0.33
RETREG1-203ENST00000506441 MS4A4AQ96JQ5 239 aa17.08■□□□□ 0.32
RETREG1-203ENST00000506441 G3V3G9 751 aa17.07■□□□□ 0.32
RETREG1-203ENST00000506441 P3H3Q8IVL6 736 aa17.07■□□□□ 0.32
RETREG1-203ENST00000506441 NBR1Q14596 966 aa17.05■□□□□ 0.32
RETREG1-203ENST00000506441 OCEL1Q9H607 264 aa17.05■□□□□ 0.32
RETREG1-203ENST00000506441 PDE4AP27815 886 aa17.04■□□□□ 0.32
RETREG1-203ENST00000506441 ILDR1Q86SU0 546 aaPredicted RBP17.04■□□□□ 0.32
RETREG1-203ENST00000506441 PLCG2P16885 1265 aa17.01■□□□□ 0.31
RETREG1-203ENST00000506441 CADPS2Q86UW7 1296 aa17■□□□□ 0.31
RETREG1-203ENST00000506441 SEC24BO95487 1268 aa16.99■□□□□ 0.31
RETREG1-203ENST00000506441 SP7Q8TDD2 431 aaPredicted RBP16.98■□□□□ 0.31
RETREG1-203ENST00000506441 IRX5P78411 483 aaPredicted RBP16.96■□□□□ 0.31
RETREG1-203ENST00000506441 SLC39A7Q92504 469 aa16.96■□□□□ 0.31
RETREG1-203ENST00000506441 L3MBTL3Q96JM7 780 aaPredicted RBP16.95■□□□□ 0.3
RETREG1-203ENST00000506441 C7P10643 843 aa16.93■□□□□ 0.3
RETREG1-203ENST00000506441 LARP6Q9BRS8 491 aaKnown RBP16.91■□□□□ 0.3
RETREG1-203ENST00000506441 PDCD7Q8N8D1 485 aaKnown RBP16.89■□□□□ 0.29
RETREG1-203ENST00000506441 DPY19L2Q6NUT2 758 aa16.87■□□□□ 0.29
RETREG1-203ENST00000506441 BOLA1Q9Y3E2 137 aa16.87■□□□□ 0.29
RETREG1-203ENST00000506441 E2F4Q16254 413 aa16.86■□□□□ 0.29
RETREG1-203ENST00000506441 MICALL2Q8IY33 904 aa16.85■□□□□ 0.29
RETREG1-203ENST00000506441 DDX27Q96GQ7 796 aaKnown RBP16.85■□□□□ 0.29
RETREG1-203ENST00000506441 CRISPLD2Q9H0B8 497 aa16.84■□□□□ 0.29
RETREG1-203ENST00000506441 TMC2Q8TDI7 906 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms