RNA–Protein interactions for RNA: ENST00000506357.5

SGCB-202, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 663 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-202ENST00000506357 PIP4P2Q8N4L2 257 aa12.31□□□□□ -0.44
SGCB-202ENST00000506357 TAOK2Q9UL54 1235 aa12.31□□□□□ -0.44
SGCB-202ENST00000506357 TSPYL2Q9H2G4 693 aaPredicted RBP12.28□□□□□ -0.44
SGCB-202ENST00000506357 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.28□□□□□ -0.44
SGCB-202ENST00000506357 PAK3O75914 559 aaPredicted RBP12.27□□□□□ -0.45
SGCB-202ENST00000506357 CHRM1P11229 460 aaPredicted RBP12.27□□□□□ -0.45
SGCB-202ENST00000506357 RIOK3O14730 519 aaKnown RBP12.26□□□□□ -0.45
SGCB-202ENST00000506357 CHGAP10645 457 aaKnown RBP12.25□□□□□ -0.45
SGCB-202ENST00000506357 PLCB2Q00722 1185 aa12.25□□□□□ -0.45
SGCB-202ENST00000506357 BBXQ8WY36 941 aaPredicted RBP12.25□□□□□ -0.45
SGCB-202ENST00000506357 PYGBP11216 843 aa12.23□□□□□ -0.45
SGCB-202ENST00000506357 RNF25Q96BH1 459 aaPredicted RBP12.22□□□□□ -0.45
SGCB-202ENST00000506357 VGFO15240 615 aaPredicted RBP12.18□□□□□ -0.46
SGCB-202ENST00000506357 HS6ST3Q8IZP7 471 aa12.17□□□□□ -0.46
SGCB-202ENST00000506357 ZNF467Q7Z7K2 595 aaPredicted RBP12.13□□□□□ -0.47
SGCB-202ENST00000506357 HAP1P54257 671 aaPredicted RBP12.12□□□□□ -0.47
SGCB-202ENST00000506357 CCDC61Q9Y6R9 512 aa12.12□□□□□ -0.47
SGCB-202ENST00000506357 STK25O00506 426 aa12.11□□□□□ -0.47
SGCB-202ENST00000506357 PAXIP1Q6ZW49 1069 aaPredicted RBP12.11□□□□□ -0.47
SGCB-202ENST00000506357 CD44P16070 742 aaKnown RBP12.1□□□□□ -0.47
SGCB-202ENST00000506357 CFAP44Q96MT7 982 aa12.1□□□□□ -0.47
SGCB-202ENST00000506357 SPRYD3Q8NCJ5 442 aa12.08□□□□□ -0.48
SGCB-202ENST00000506357 SGIP1Q9BQI5 828 aa12.07□□□□□ -0.48
SGCB-202ENST00000506357 ZRANB1Q9UGI0 708 aa12.07□□□□□ -0.48
SGCB-202ENST00000506357 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.06□□□□□ -0.48
SGCB-202ENST00000506357 ZFP91Q96JP5 570 aaPredicted RBP12.06□□□□□ -0.48
SGCB-202ENST00000506357 STK24Q9Y6E0 443 aa12.05□□□□□ -0.48
SGCB-202ENST00000506357 BCL11BQ9C0K0 894 aaPredicted RBP12.04□□□□□ -0.48
SGCB-202ENST00000506357 PDAP1Q13442 181 aaKnown RBP12.03□□□□□ -0.48
SGCB-202ENST00000506357 ZNF579Q8NAF0 562 aaKnown RBP12.03□□□□□ -0.48
SGCB-202ENST00000506357 PCDHB13Q9Y5F0 798 aa12.03□□□□□ -0.48
SGCB-202ENST00000506357 DNAJC5Q9H3Z4 198 aa12.02□□□□□ -0.49
SGCB-202ENST00000506357 PCDHB8Q9UN66 801 aa12.02□□□□□ -0.49
SGCB-202ENST00000506357 KIF12Q96FN5 646 aa12□□□□□ -0.49
SGCB-202ENST00000506357 MAP3K13O43283 966 aa11.98□□□□□ -0.49
SGCB-202ENST00000506357 C19orf67A6NJJ6 358 aa11.96□□□□□ -0.49
SGCB-202ENST00000506357 PSEN1P49768 467 aa11.96□□□□□ -0.49
SGCB-202ENST00000506357 PHF12Q96QT6 1004 aa11.96□□□□□ -0.49
SGCB-202ENST00000506357 RYDENQ9NUL5 291 aaKnown RBP11.96□□□□□ -0.49
SGCB-202ENST00000506357 IFNL1Q8IU54 200 aa11.95□□□□□ -0.5
SGCB-202ENST00000506357 NKX1-1Q15270 411 aaPredicted RBP11.92□□□□□ -0.5
SGCB-202ENST00000506357 VSIG10Q8N0Z9 540 aa11.91□□□□□ -0.5
SGCB-202ENST00000506357 HAX1O00165 279 aa11.9□□□□□ -0.5
SGCB-202ENST00000506357 GTPBP6O43824 516 aaPredicted RBP11.86□□□□□ -0.51
SGCB-202ENST00000506357 TSHZ2Q9NRE2 1034 aa11.84□□□□□ -0.51
SGCB-202ENST00000506357 MS4A3Q96HJ5 214 aa11.82□□□□□ -0.52
SGCB-202ENST00000506357 CABP2Q9NPB3 220 aa11.82□□□□□ -0.52
SGCB-202ENST00000506357 GOLGA2Q08379 1002 aa11.81□□□□□ -0.52
SGCB-202ENST00000506357 CLCN6P51797 869 aa11.79□□□□□ -0.52
SGCB-202ENST00000506357 TMEM106CQ9BVX2 250 aa11.78□□□□□ -0.52
SGCB-202ENST00000506357 EFCAB3Q8N7B9 438 aa11.76□□□□□ -0.53
SGCB-202ENST00000506357 SOX12O15370 315 aa11.75□□□□□ -0.53
SGCB-202ENST00000506357 NLRP6P59044 892 aa11.74□□□□□ -0.53
SGCB-202ENST00000506357 TIE1P35590 1138 aa11.73□□□□□ -0.53
SGCB-202ENST00000506357 MFRPQ9BY79 579 aa11.73□□□□□ -0.53
SGCB-202ENST00000506357 KDM2AQ9Y2K7 1162 aa11.73□□□□□ -0.53
SGCB-202ENST00000506357 TRPC6Q9Y210 931 aa11.71□□□□□ -0.53
SGCB-202ENST00000506357 MKRN3Q13064 507 aaKnown RBP11.7□□□□□ -0.54
SGCB-202ENST00000506357 GALR2O43603 387 aaPredicted RBP11.69□□□□□ -0.54
SGCB-202ENST00000506357 EVX2Q03828 476 aa11.68□□□□□ -0.54
SGCB-202ENST00000506357 POTEHQ6S545 545 aa11.68□□□□□ -0.54
SGCB-202ENST00000506357 PHF8Q9UPP1 1060 aa11.68□□□□□ -0.54
SGCB-202ENST00000506357 TTLL13PA6NNM8 815 aa11.66□□□□□ -0.54
SGCB-202ENST00000506357 BMP2KQ9NSY1 1161 aaPredicted RBP11.65□□□□□ -0.54
SGCB-202ENST00000506357 FBXO22Q8NEZ5 403 aa11.64□□□□□ -0.55
SGCB-202ENST00000506357 BCANQ96GW7 911 aa11.63□□□□□ -0.55
SGCB-202ENST00000506357 TRIM35Q9UPQ4 493 aa11.6□□□□□ -0.55
SGCB-202ENST00000506357 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.58□□□□□ -0.56
SGCB-202ENST00000506357 PPP1R37O75864 691 aa11.56□□□□□ -0.56
SGCB-202ENST00000506357 WDR70Q9NW82 654 aa11.56□□□□□ -0.56
SGCB-202ENST00000506357 GABBR2O75899 941 aa11.55□□□□□ -0.56
SGCB-202ENST00000506357 MS4A4AQ96JQ5 239 aa11.54□□□□□ -0.56
SGCB-202ENST00000506357 DCBLD2Q96PD2 775 aa11.53□□□□□ -0.56
SGCB-202ENST00000506357 ATMINO43313 823 aaPredicted RBP11.52□□□□□ -0.57
SGCB-202ENST00000506357 ATN1P54259 1190 aaPredicted RBP11.52□□□□□ -0.57
SGCB-202ENST00000506357 ASTLQ6HA08 431 aaPredicted RBP11.52□□□□□ -0.57
SGCB-202ENST00000506357 CADPS2Q86UW7 1296 aa11.52□□□□□ -0.57
SGCB-202ENST00000506357 NBR1Q14596 966 aa11.5□□□□□ -0.57
SGCB-202ENST00000506357 IER5LQ5T953 404 aa11.5□□□□□ -0.57
SGCB-202ENST00000506357 P3H3Q8IVL6 736 aa11.48□□□□□ -0.57
SGCB-202ENST00000506357 ILDR1Q86SU0 546 aaPredicted RBP11.46□□□□□ -0.57
SGCB-202ENST00000506357 G3V3G9 751 aa11.45□□□□□ -0.58
SGCB-202ENST00000506357 OCEL1Q9H607 264 aa11.45□□□□□ -0.58
SGCB-202ENST00000506357 PLCG2P16885 1265 aa11.44□□□□□ -0.58
SGCB-202ENST00000506357 PDE4AP27815 886 aa11.42□□□□□ -0.58
SGCB-202ENST00000506357 SEC24BO95487 1268 aa11.41□□□□□ -0.58
SGCB-202ENST00000506357 IRX5P78411 483 aaPredicted RBP11.41□□□□□ -0.58
SGCB-202ENST00000506357 SP7Q8TDD2 431 aaPredicted RBP11.41□□□□□ -0.58
SGCB-202ENST00000506357 PDCD7Q8N8D1 485 aaKnown RBP11.4□□□□□ -0.58
SGCB-202ENST00000506357 LARP6Q9BRS8 491 aaKnown RBP11.39□□□□□ -0.59
SGCB-202ENST00000506357 DPY19L2Q6NUT2 758 aa11.38□□□□□ -0.59
SGCB-202ENST00000506357 SLC39A7Q92504 469 aa11.38□□□□□ -0.59
SGCB-202ENST00000506357 NCKAP5LQ9HCH0 1330 aa11.36□□□□□ -0.59
SGCB-202ENST00000506357 MICALL2Q8IY33 904 aa11.36□□□□□ -0.59
SGCB-202ENST00000506357 L3MBTL3Q96JM7 780 aaPredicted RBP11.36□□□□□ -0.59
SGCB-202ENST00000506357 C7P10643 843 aa11.35□□□□□ -0.59
SGCB-202ENST00000506357 DDX27Q96GQ7 796 aaKnown RBP11.35□□□□□ -0.59
SGCB-202ENST00000506357 CRISPLD2Q9H0B8 497 aa11.35□□□□□ -0.59
SGCB-202ENST00000506357 BOLA1Q9Y3E2 137 aa11.35□□□□□ -0.59
SGCB-202ENST00000506357 E2F4Q16254 413 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms