RNA–Protein interactions for RNA: ENST00000505885.1

SRPK1-207, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-207ENST00000505885 FAM212AQ96EL1 285 aa10.48□□□□□ -0.73
SRPK1-207ENST00000505885 CCDC61Q9Y6R9 512 aa10.48□□□□□ -0.73
SRPK1-207ENST00000505885 GALR2O43603 387 aaPredicted RBP10.45□□□□□ -0.74
SRPK1-207ENST00000505885 DCAF8Q5TAQ9 597 aa10.45□□□□□ -0.74
SRPK1-207ENST00000505885 SPOCK2Q92563 424 aa10.43□□□□□ -0.74
SRPK1-207ENST00000505885 CLCN6P51797 869 aa10.42□□□□□ -0.74
SRPK1-207ENST00000505885 MS4A3Q96HJ5 214 aa10.4□□□□□ -0.74
SRPK1-207ENST00000505885 KIF12Q96FN5 646 aa10.39□□□□□ -0.75
SRPK1-207ENST00000505885 MAP3K13O43283 966 aa10.38□□□□□ -0.75
SRPK1-207ENST00000505885 PYGBP11216 843 aa10.36□□□□□ -0.75
SRPK1-207ENST00000505885 DCBLD2Q96PD2 775 aa10.36□□□□□ -0.75
SRPK1-207ENST00000505885 CIZ1Q9ULV3 898 aaPredicted RBP10.36□□□□□ -0.75
SRPK1-207ENST00000505885 GSE1Q14687 1217 aa10.35□□□□□ -0.75
SRPK1-207ENST00000505885 POTEIP0CG38 1075 aa10.33□□□□□ -0.76
SRPK1-207ENST00000505885 PCDHB13Q9Y5F0 798 aa10.32□□□□□ -0.76
SRPK1-207ENST00000505885 TRPC6Q9Y210 931 aa10.3□□□□□ -0.76
SRPK1-207ENST00000505885 IFNL1Q8IU54 200 aa10.27□□□□□ -0.77
SRPK1-207ENST00000505885 SGIP1Q9BQI5 828 aa10.25□□□□□ -0.77
SRPK1-207ENST00000505885 PCDHB8Q9UN66 801 aa10.23□□□□□ -0.77
SRPK1-207ENST00000505885 BMP2KQ9NSY1 1161 aaPredicted RBP10.22□□□□□ -0.77
SRPK1-207ENST00000505885 ATMINO43313 823 aaPredicted RBP10.21□□□□□ -0.77
SRPK1-207ENST00000505885 ASTLQ6HA08 431 aaPredicted RBP10.2□□□□□ -0.78
SRPK1-207ENST00000505885 PELP1Q8IZL8 1130 aaKnown RBP10.2□□□□□ -0.78
SRPK1-207ENST00000505885 CHRM1P11229 460 aaPredicted RBP10.19□□□□□ -0.78
SRPK1-207ENST00000505885 TIE1P35590 1138 aa10.19□□□□□ -0.78
SRPK1-207ENST00000505885 ATN1P54259 1190 aaPredicted RBP10.19□□□□□ -0.78
SRPK1-207ENST00000505885 TTLL13PA6NNM8 815 aa10.18□□□□□ -0.78
SRPK1-207ENST00000505885 ZNF467Q7Z7K2 595 aaPredicted RBP10.17□□□□□ -0.78
SRPK1-207ENST00000505885 TMEM106CQ9BVX2 250 aa10.16□□□□□ -0.78
SRPK1-207ENST00000505885 TRIM41Q8WV44 630 aa10.14□□□□□ -0.79
SRPK1-207ENST00000505885 TRIM35Q9UPQ4 493 aa10.12□□□□□ -0.79
SRPK1-207ENST00000505885 METRNQ9UJH8 293 aa10.11□□□□□ -0.79
SRPK1-207ENST00000505885 SLC39A7Q92504 469 aa10.1□□□□□ -0.79
SRPK1-207ENST00000505885 ECM2O94769 699 aaPredicted RBP10.09□□□□□ -0.79
SRPK1-207ENST00000505885 PSEN1P49768 467 aa10.09□□□□□ -0.79
SRPK1-207ENST00000505885 PKD2Q13563 968 aa10.09□□□□□ -0.79
SRPK1-207ENST00000505885 LHX8Q68G74 356 aa10.08□□□□□ -0.8
SRPK1-207ENST00000505885 RNF25Q96BH1 459 aaPredicted RBP10.08□□□□□ -0.8
SRPK1-207ENST00000505885 C7P10643 843 aa10.07□□□□□ -0.8
SRPK1-207ENST00000505885 PDAP1Q13442 181 aaKnown RBP10.07□□□□□ -0.8
SRPK1-207ENST00000505885 RIOK3O14730 519 aaKnown RBP10.04□□□□□ -0.8
SRPK1-207ENST00000505885 SEC24BO95487 1268 aa10.02□□□□□ -0.81
SRPK1-207ENST00000505885 POTEB2H3BUK9 544 aa10.01□□□□□ -0.81
SRPK1-207ENST00000505885 GOLGA2Q08379 1002 aa10.01□□□□□ -0.81
SRPK1-207ENST00000505885 POTEFA5A3E0 1075 aa10□□□□□ -0.81
SRPK1-207ENST00000505885 RGL2O15211 777 aa10□□□□□ -0.81
SRPK1-207ENST00000505885 COLQQ9Y215 455 aaPredicted RBP10□□□□□ -0.81
SRPK1-207ENST00000505885 IER5LQ5T953 404 aa9.99□□□□□ -0.81
SRPK1-207ENST00000505885 CABP2Q9NPB3 220 aa9.99□□□□□ -0.81
SRPK1-207ENST00000505885 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.98□□□□□ -0.81
SRPK1-207ENST00000505885 VGFO15240 615 aaPredicted RBP9.98□□□□□ -0.81
SRPK1-207ENST00000505885 ZFP91Q96JP5 570 aaPredicted RBP9.98□□□□□ -0.81
SRPK1-207ENST00000505885 MKRN3Q13064 507 aaKnown RBP9.97□□□□□ -0.81
SRPK1-207ENST00000505885 PLCG2P16885 1265 aa9.96□□□□□ -0.82
SRPK1-207ENST00000505885 IRX5P78411 483 aaPredicted RBP9.95□□□□□ -0.82
SRPK1-207ENST00000505885 POTEJP0CG39 1038 aa9.92□□□□□ -0.82
SRPK1-207ENST00000505885 OCEL1Q9H607 264 aa9.91□□□□□ -0.82
SRPK1-207ENST00000505885 TAOK2Q9UL54 1235 aa9.91□□□□□ -0.82
SRPK1-207ENST00000505885 EFCAB3Q8N7B9 438 aa9.9□□□□□ -0.82
SRPK1-207ENST00000505885 BCL11BQ9C0K0 894 aaPredicted RBP9.9□□□□□ -0.82
SRPK1-207ENST00000505885 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.9□□□□□ -0.82
SRPK1-207ENST00000505885 STK25O00506 426 aa9.89□□□□□ -0.83
SRPK1-207ENST00000505885 OTUD5Q96G74 571 aa9.89□□□□□ -0.83
SRPK1-207ENST00000505885 STK24Q9Y6E0 443 aa9.89□□□□□ -0.83
SRPK1-207ENST00000505885 PDCD7Q8N8D1 485 aaKnown RBP9.87□□□□□ -0.83
SRPK1-207ENST00000505885 SCUBE2Q9NQ36 999 aa9.84□□□□□ -0.83
SRPK1-207ENST00000505885 MAMSTRQ6ZN01 415 aa9.83□□□□□ -0.84
SRPK1-207ENST00000505885 DPY19L2Q6NUT2 758 aa9.82□□□□□ -0.84
SRPK1-207ENST00000505885 DCAF8L2P0C7V8 631 aa9.81□□□□□ -0.84
SRPK1-207ENST00000505885 ILDR1Q86SU0 546 aaPredicted RBP9.8□□□□□ -0.84
SRPK1-207ENST00000505885 PHF8Q9UPP1 1060 aa9.8□□□□□ -0.84
SRPK1-207ENST00000505885 SOX12O15370 315 aa9.78□□□□□ -0.84
SRPK1-207ENST00000505885 CHGAP10645 457 aaKnown RBP9.78□□□□□ -0.84
SRPK1-207ENST00000505885 RTN4Q9NQC3 1192 aaKnown RBP9.77□□□□□ -0.85
SRPK1-207ENST00000505885 AMER1Q5JTC6 1135 aaPredicted RBP9.76□□□□□ -0.85
SRPK1-207ENST00000505885 L3MBTL3Q96JM7 780 aaPredicted RBP9.76□□□□□ -0.85
SRPK1-207ENST00000505885 HS6ST3Q8IZP7 471 aa9.75□□□□□ -0.85
SRPK1-207ENST00000505885 G3V3G9 751 aa9.74□□□□□ -0.85
SRPK1-207ENST00000505885 MS4A4AQ96JQ5 239 aa9.74□□□□□ -0.85
SRPK1-207ENST00000505885 MFRPQ9BY79 579 aa9.74□□□□□ -0.85
SRPK1-207ENST00000505885 NLRP6P59044 892 aa9.73□□□□□ -0.85
SRPK1-207ENST00000505885 C3orf67Q6ZVT6 689 aa9.73□□□□□ -0.85
SRPK1-207ENST00000505885 SLAIN1Q8ND83 568 aa9.73□□□□□ -0.85
SRPK1-207ENST00000505885 BOLA1Q9Y3E2 137 aa9.73□□□□□ -0.85
SRPK1-207ENST00000505885 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.72□□□□□ -0.85
SRPK1-207ENST00000505885 FBXO22Q8NEZ5 403 aa9.71□□□□□ -0.86
SRPK1-207ENST00000505885 MICALL2Q8IY33 904 aa9.67□□□□□ -0.86
SRPK1-207ENST00000505885 NKX1-1Q15270 411 aaPredicted RBP9.64□□□□□ -0.87
SRPK1-207ENST00000505885 TMEM121BQ9BXQ6 578 aaPredicted RBP9.64□□□□□ -0.87
SRPK1-207ENST00000505885 PPP1R37O75864 691 aa9.61□□□□□ -0.87
SRPK1-207ENST00000505885 FAM163AQ96GL9 167 aaPredicted RBP9.6□□□□□ -0.87
SRPK1-207ENST00000505885 DNAJC5Q9H3Z4 198 aa9.59□□□□□ -0.87
SRPK1-207ENST00000505885 TMEM92Q6UXU6 159 aa9.57□□□□□ -0.88
SRPK1-207ENST00000505885 LCE2DQ5TA82 110 aaPredicted RBP9.53□□□□□ -0.88
SRPK1-207ENST00000505885 RYDENQ9NUL5 291 aaKnown RBP9.52□□□□□ -0.89
SRPK1-207ENST00000505885 SNPHO15079 494 aa9.51□□□□□ -0.89
SRPK1-207ENST00000505885 GTPBP6O43824 516 aaPredicted RBP9.51□□□□□ -0.89
SRPK1-207ENST00000505885 ST18O60284 1047 aa9.5□□□□□ -0.89
SRPK1-207ENST00000505885 POTEMA6NI47 508 aa9.48□□□□□ -0.89
SRPK1-207ENST00000505885 C2orf72A6NCS6 295 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms