RNA–Protein interactions for RNA: ENST00000505795.1

HMGN1P13-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 13, humanhuman

BASIC

Gene HMGN1P13, Length 138 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P13-201ENST00000505795 OTUD5Q96G74 571 aa11.64□□□□□ -0.55
HMGN1P13-201ENST00000505795 MIER1Q8N108 512 aa11.63□□□□□ -0.55
HMGN1P13-201ENST00000505795 KIF12Q96FN5 646 aa11.61□□□□□ -0.55
HMGN1P13-201ENST00000505795 PLEKHG5O94827 1062 aa11.6□□□□□ -0.55
HMGN1P13-201ENST00000505795 RASEFQ8IZ41 740 aa11.59□□□□□ -0.55
HMGN1P13-201ENST00000505795 METRNQ9UJH8 293 aa11.58□□□□□ -0.56
HMGN1P13-201ENST00000505795 SLC39A7Q92504 469 aa11.56□□□□□ -0.56
HMGN1P13-201ENST00000505795 C7P10643 843 aa11.55□□□□□ -0.56
HMGN1P13-201ENST00000505795 ATN1P54259 1190 aaPredicted RBP11.54□□□□□ -0.56
HMGN1P13-201ENST00000505795 MAP3K13O43283 966 aa11.53□□□□□ -0.56
HMGN1P13-201ENST00000505795 PLCD3Q8N3E9 789 aa11.52□□□□□ -0.57
HMGN1P13-201ENST00000505795 TRPC6Q9Y210 931 aa11.52□□□□□ -0.57
HMGN1P13-201ENST00000505795 POTEJP0CG39 1038 aa11.51□□□□□ -0.57
HMGN1P13-201ENST00000505795 BMP2KQ9NSY1 1161 aaPredicted RBP11.51□□□□□ -0.57
HMGN1P13-201ENST00000505795 FKBP8Q14318 412 aa11.5□□□□□ -0.57
HMGN1P13-201ENST00000505795 NUBP1P53384 320 aa11.47□□□□□ -0.57
HMGN1P13-201ENST00000505795 TIE1P35590 1138 aa11.46□□□□□ -0.57
HMGN1P13-201ENST00000505795 ZBTB47Q9UFB7 747 aaPredicted RBP11.44□□□□□ -0.58
HMGN1P13-201ENST00000505795 POTEFA5A3E0 1075 aa11.43□□□□□ -0.58
HMGN1P13-201ENST00000505795 SGIP1Q9BQI5 828 aa11.41□□□□□ -0.58
HMGN1P13-201ENST00000505795 TTLL13PA6NNM8 815 aa11.4□□□□□ -0.58
HMGN1P13-201ENST00000505795 MAMSTRQ6ZN01 415 aa11.4□□□□□ -0.58
HMGN1P13-201ENST00000505795 PCDHB13Q9Y5F0 798 aa11.38□□□□□ -0.59
HMGN1P13-201ENST00000505795 POTEMA6NI47 508 aa11.35□□□□□ -0.59
HMGN1P13-201ENST00000505795 FAM212AQ96EL1 285 aa11.35□□□□□ -0.59
HMGN1P13-201ENST00000505795 IFNL1Q8IU54 200 aa11.34□□□□□ -0.59
HMGN1P13-201ENST00000505795 COLQQ9Y215 455 aaPredicted RBP11.34□□□□□ -0.59
HMGN1P13-201ENST00000505795 SCUBE2Q9NQ36 999 aa11.33□□□□□ -0.6
HMGN1P13-201ENST00000505795 POTEGQ6S5H5 508 aa11.32□□□□□ -0.6
HMGN1P13-201ENST00000505795 TRIM35Q9UPQ4 493 aa11.32□□□□□ -0.6
HMGN1P13-201ENST00000505795 PLSCR2Q9NRY7 297 aa11.31□□□□□ -0.6
HMGN1P13-201ENST00000505795 IER5LQ5T953 404 aa11.29□□□□□ -0.6
HMGN1P13-201ENST00000505795 SEC24BO95487 1268 aa11.28□□□□□ -0.6
HMGN1P13-201ENST00000505795 LCE2DQ5TA82 110 aaPredicted RBP11.28□□□□□ -0.6
HMGN1P13-201ENST00000505795 FBXO3Q9UK99 471 aa11.27□□□□□ -0.61
HMGN1P13-201ENST00000505795 TMEM106CQ9BVX2 250 aa11.25□□□□□ -0.61
HMGN1P13-201ENST00000505795 DCAF8Q5TAQ9 597 aa11.23□□□□□ -0.61
HMGN1P13-201ENST00000505795 PYGBP11216 843 aa11.21□□□□□ -0.61
HMGN1P13-201ENST00000505795 FAM163AQ96GL9 167 aaPredicted RBP11.21□□□□□ -0.61
HMGN1P13-201ENST00000505795 VASPP50552 380 aaPredicted RBP11.18□□□□□ -0.62
HMGN1P13-201ENST00000505795 IRX5P78411 483 aaPredicted RBP11.16□□□□□ -0.62
HMGN1P13-201ENST00000505795 PCDH10Q9P2E7 1040 aa11.16□□□□□ -0.62
HMGN1P13-201ENST00000505795 PCDHB8Q9UN66 801 aa11.15□□□□□ -0.62
HMGN1P13-201ENST00000505795 PLCG2P16885 1265 aa11.14□□□□□ -0.63
HMGN1P13-201ENST00000505795 KLHL34Q8N239 644 aa11.11□□□□□ -0.63
HMGN1P13-201ENST00000505795 GSE1Q14687 1217 aa11.09□□□□□ -0.63
HMGN1P13-201ENST00000505795 SLAIN1Q8ND83 568 aa11.09□□□□□ -0.63
HMGN1P13-201ENST00000505795 OCEL1Q9H607 264 aa11.08□□□□□ -0.64
HMGN1P13-201ENST00000505795 CHRM1P11229 460 aaPredicted RBP11.05□□□□□ -0.64
HMGN1P13-201ENST00000505795 ZNF467Q7Z7K2 595 aaPredicted RBP11.04□□□□□ -0.64
HMGN1P13-201ENST00000505795 ST18O60284 1047 aa11□□□□□ -0.65
HMGN1P13-201ENST00000505795 PDCD7Q8N8D1 485 aaKnown RBP10.99□□□□□ -0.65
HMGN1P13-201ENST00000505795 IFNLR1Q8IU57 520 aaPredicted RBP10.98□□□□□ -0.65
HMGN1P13-201ENST00000505795 PSEN1P49768 467 aa10.96□□□□□ -0.65
HMGN1P13-201ENST00000505795 CDAN1Q8IWY9 1227 aa10.95□□□□□ -0.66
HMGN1P13-201ENST00000505795 SPOCK2Q92563 424 aa10.95□□□□□ -0.66
HMGN1P13-201ENST00000505795 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.95□□□□□ -0.66
HMGN1P13-201ENST00000505795 MKRN3Q13064 507 aaKnown RBP10.94□□□□□ -0.66
HMGN1P13-201ENST00000505795 GOLGA2Q08379 1002 aa10.92□□□□□ -0.66
HMGN1P13-201ENST00000505795 PDAP1Q13442 181 aaKnown RBP10.9□□□□□ -0.66
HMGN1P13-201ENST00000505795 ILDR1Q86SU0 546 aaPredicted RBP10.89□□□□□ -0.67
HMGN1P13-201ENST00000505795 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.89□□□□□ -0.67
HMGN1P13-201ENST00000505795 CIZ1Q9ULV3 898 aaPredicted RBP10.89□□□□□ -0.67
HMGN1P13-201ENST00000505795 SNPHO15079 494 aa10.87□□□□□ -0.67
HMGN1P13-201ENST00000505795 L3MBTL3Q96JM7 780 aaPredicted RBP10.87□□□□□ -0.67
HMGN1P13-201ENST00000505795 TMEM121BQ9BXQ6 578 aaPredicted RBP10.87□□□□□ -0.67
HMGN1P13-201ENST00000505795 C3orf67Q6ZVT6 689 aa10.85□□□□□ -0.67
HMGN1P13-201ENST00000505795 DPY19L2Q6NUT2 758 aa10.82□□□□□ -0.68
HMGN1P13-201ENST00000505795 CABP2Q9NPB3 220 aa10.82□□□□□ -0.68
HMGN1P13-201ENST00000505795 MARVELD3Q96A59 401 aa10.8□□□□□ -0.68
HMGN1P13-201ENST00000505795 TRIM41Q8WV44 630 aa10.74□□□□□ -0.69
HMGN1P13-201ENST00000505795 BOLA1Q9Y3E2 137 aa10.74□□□□□ -0.69
HMGN1P13-201ENST00000505795 EMP3P54852 163 aa10.7□□□□□ -0.7
HMGN1P13-201ENST00000505795 SPNS2Q8IVW8 549 aa10.7□□□□□ -0.7
HMGN1P13-201ENST00000505795 EFCAB3Q8N7B9 438 aa10.69□□□□□ -0.7
HMGN1P13-201ENST00000505795 POTEB3A0JP26 581 aa10.68□□□□□ -0.7
HMGN1P13-201ENST00000505795 G3V3G9 751 aa10.68□□□□□ -0.7
HMGN1P13-201ENST00000505795 POTEBQ6S5H4 581 aa10.68□□□□□ -0.7
HMGN1P13-201ENST00000505795 HOXB3P14651 431 aaPredicted RBP10.67□□□□□ -0.7
HMGN1P13-201ENST00000505795 MMRN1Q13201 1228 aa10.66□□□□□ -0.7
HMGN1P13-201ENST00000505795 RNF25Q96BH1 459 aaPredicted RBP10.66□□□□□ -0.7
HMGN1P13-201ENST00000505795 HS3ST6Q96QI5 342 aa10.65□□□□□ -0.7
HMGN1P13-201ENST00000505795 FAM205CA6NFA0 338 aa10.63□□□□□ -0.71
HMGN1P13-201ENST00000505795 RIOK3O14730 519 aaKnown RBP10.62□□□□□ -0.71
HMGN1P13-201ENST00000505795 KRTAP3-3Q9BYR6 98 aa10.62□□□□□ -0.71
HMGN1P13-201ENST00000505795 KRTAP3-2Q9BYR7 98 aa10.62□□□□□ -0.71
HMGN1P13-201ENST00000505795 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.59□□□□□ -0.71
HMGN1P13-201ENST00000505795 ZFP91Q96JP5 570 aaPredicted RBP10.59□□□□□ -0.71
HMGN1P13-201ENST00000505795 SOX12O15370 315 aa10.58□□□□□ -0.72
HMGN1P13-201ENST00000505795 MICALL2Q8IY33 904 aa10.58□□□□□ -0.72
HMGN1P13-201ENST00000505795 MS4A4AQ96JQ5 239 aa10.58□□□□□ -0.72
HMGN1P13-201ENST00000505795 VGFO15240 615 aaPredicted RBP10.57□□□□□ -0.72
HMGN1P13-201ENST00000505795 HOXB1P14653 301 aaPredicted RBP10.57□□□□□ -0.72
HMGN1P13-201ENST00000505795 TMEM92Q6UXU6 159 aa10.57□□□□□ -0.72
HMGN1P13-201ENST00000505795 DOK7Q18PE1 504 aa10.56□□□□□ -0.72
HMGN1P13-201ENST00000505795 ZNF710Q8N1W2 664 aa10.55□□□□□ -0.72
HMGN1P13-201ENST00000505795 PHF8Q9UPP1 1060 aa10.54□□□□□ -0.72
HMGN1P13-201ENST00000505795 RIMBP2O15034 1052 aa10.48□□□□□ -0.73
HMGN1P13-201ENST00000505795 ERBB3P21860 1342 aa10.48□□□□□ -0.73
HMGN1P13-201ENST00000505795 FBXO22Q8NEZ5 403 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms