RNA–Protein interactions for RNA: ENST00000505770.1

PAPD4-210, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 2

Gene PAPD4, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-210ENST00000505770 LHX8Q68G74 356 aa12.58□□□□□ -0.4
PAPD4-210ENST00000505770 CCDC61Q9Y6R9 512 aa12.55□□□□□ -0.4
PAPD4-210ENST00000505770 RASEFQ8IZ41 740 aa12.54□□□□□ -0.4
PAPD4-210ENST00000505770 MS4A3Q96HJ5 214 aa12.54□□□□□ -0.4
PAPD4-210ENST00000505770 ZBTB47Q9UFB7 747 aaPredicted RBP12.48□□□□□ -0.41
PAPD4-210ENST00000505770 KIF12Q96FN5 646 aa12.47□□□□□ -0.41
PAPD4-210ENST00000505770 FBXO3Q9UK99 471 aa12.47□□□□□ -0.41
PAPD4-210ENST00000505770 NUBP1P53384 320 aa12.46□□□□□ -0.41
PAPD4-210ENST00000505770 PELP1Q8IZL8 1130 aaKnown RBP12.42□□□□□ -0.42
PAPD4-210ENST00000505770 MAP3K13O43283 966 aa12.4□□□□□ -0.42
PAPD4-210ENST00000505770 ASTLQ6HA08 431 aaPredicted RBP12.4□□□□□ -0.42
PAPD4-210ENST00000505770 ATMINO43313 823 aaPredicted RBP12.39□□□□□ -0.43
PAPD4-210ENST00000505770 TRPC6Q9Y210 931 aa12.36□□□□□ -0.43
PAPD4-210ENST00000505770 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
PAPD4-210ENST00000505770 FAM212AQ96EL1 285 aa12.34□□□□□ -0.43
PAPD4-210ENST00000505770 POTEB2H3BUK9 544 aa12.31□□□□□ -0.44
PAPD4-210ENST00000505770 ATN1P54259 1190 aaPredicted RBP12.31□□□□□ -0.44
PAPD4-210ENST00000505770 BMP2KQ9NSY1 1161 aaPredicted RBP12.31□□□□□ -0.44
PAPD4-210ENST00000505770 METRNQ9UJH8 293 aa12.3□□□□□ -0.44
PAPD4-210ENST00000505770 SLC39A7Q92504 469 aa12.29□□□□□ -0.44
PAPD4-210ENST00000505770 PCDHB13Q9Y5F0 798 aa12.28□□□□□ -0.44
PAPD4-210ENST00000505770 C7P10643 843 aa12.27□□□□□ -0.45
PAPD4-210ENST00000505770 TIE1P35590 1138 aa12.27□□□□□ -0.45
PAPD4-210ENST00000505770 SGIP1Q9BQI5 828 aa12.27□□□□□ -0.45
PAPD4-210ENST00000505770 DCAF8Q5TAQ9 597 aa12.25□□□□□ -0.45
PAPD4-210ENST00000505770 KLHL34Q8N239 644 aa12.25□□□□□ -0.45
PAPD4-210ENST00000505770 TTLL13PA6NNM8 815 aa12.23□□□□□ -0.45
PAPD4-210ENST00000505770 IFNL1Q8IU54 200 aa12.23□□□□□ -0.45
PAPD4-210ENST00000505770 OTUD5Q96G74 571 aa12.23□□□□□ -0.45
PAPD4-210ENST00000505770 PYGBP11216 843 aa12.19□□□□□ -0.46
PAPD4-210ENST00000505770 POTEJP0CG39 1038 aa12.17□□□□□ -0.46
PAPD4-210ENST00000505770 POTEFA5A3E0 1075 aa12.16□□□□□ -0.46
PAPD4-210ENST00000505770 PLCB2Q00722 1185 aa12.16□□□□□ -0.46
PAPD4-210ENST00000505770 IFNLR1Q8IU57 520 aaPredicted RBP12.14□□□□□ -0.47
PAPD4-210ENST00000505770 TRIM35Q9UPQ4 493 aa12.14□□□□□ -0.47
PAPD4-210ENST00000505770 GSE1Q14687 1217 aa12.13□□□□□ -0.47
PAPD4-210ENST00000505770 TMEM106CQ9BVX2 250 aa12.12□□□□□ -0.47
PAPD4-210ENST00000505770 PCDHB8Q9UN66 801 aa12.1□□□□□ -0.47
PAPD4-210ENST00000505770 COLQQ9Y215 455 aaPredicted RBP12.09□□□□□ -0.47
PAPD4-210ENST00000505770 SPOCK2Q92563 424 aa12.08□□□□□ -0.48
PAPD4-210ENST00000505770 IER5LQ5T953 404 aa12.07□□□□□ -0.48
PAPD4-210ENST00000505770 SEC24BO95487 1268 aa12.06□□□□□ -0.48
PAPD4-210ENST00000505770 MAMSTRQ6ZN01 415 aa12.06□□□□□ -0.48
PAPD4-210ENST00000505770 CHRM1P11229 460 aaPredicted RBP12.02□□□□□ -0.49
PAPD4-210ENST00000505770 SCUBE2Q9NQ36 999 aa12.01□□□□□ -0.49
PAPD4-210ENST00000505770 ZNF467Q7Z7K2 595 aaPredicted RBP12□□□□□ -0.49
PAPD4-210ENST00000505770 CIZ1Q9ULV3 898 aaPredicted RBP11.99□□□□□ -0.49
PAPD4-210ENST00000505770 HAP1P54257 671 aaPredicted RBP11.97□□□□□ -0.49
PAPD4-210ENST00000505770 IRX5P78411 483 aaPredicted RBP11.96□□□□□ -0.49
PAPD4-210ENST00000505770 PLCG2P16885 1265 aa11.95□□□□□ -0.5
PAPD4-210ENST00000505770 DCAF8L2P0C7V8 631 aa11.91□□□□□ -0.5
PAPD4-210ENST00000505770 PSEN1P49768 467 aa11.91□□□□□ -0.5
PAPD4-210ENST00000505770 OCEL1Q9H607 264 aa11.89□□□□□ -0.51
PAPD4-210ENST00000505770 PKD2Q13563 968 aa11.88□□□□□ -0.51
PAPD4-210ENST00000505770 PDAP1Q13442 181 aaKnown RBP11.87□□□□□ -0.51
PAPD4-210ENST00000505770 GOLGA2Q08379 1002 aa11.84□□□□□ -0.51
PAPD4-210ENST00000505770 BCANQ96GW7 911 aa11.84□□□□□ -0.51
PAPD4-210ENST00000505770 POTEMA6NI47 508 aa11.83□□□□□ -0.52
PAPD4-210ENST00000505770 PRKCSHP14314 528 aaPredicted RBP11.83□□□□□ -0.52
PAPD4-210ENST00000505770 MKRN3Q13064 507 aaKnown RBP11.83□□□□□ -0.52
PAPD4-210ENST00000505770 LCE2DQ5TA82 110 aaPredicted RBP11.82□□□□□ -0.52
PAPD4-210ENST00000505770 POTEGQ6S5H5 508 aa11.82□□□□□ -0.52
PAPD4-210ENST00000505770 PDCD7Q8N8D1 485 aaKnown RBP11.82□□□□□ -0.52
PAPD4-210ENST00000505770 TRIM41Q8WV44 630 aa11.81□□□□□ -0.52
PAPD4-210ENST00000505770 FAM163AQ96GL9 167 aaPredicted RBP11.81□□□□□ -0.52
PAPD4-210ENST00000505770 SLAIN1Q8ND83 568 aa11.8□□□□□ -0.52
PAPD4-210ENST00000505770 VSIG10Q8N0Z9 540 aa11.79□□□□□ -0.52
PAPD4-210ENST00000505770 CABP2Q9NPB3 220 aa11.77□□□□□ -0.53
PAPD4-210ENST00000505770 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.536e-7■□□□□ 11.1
PAPD4-210ENST00000505770 TAOK2Q9UL54 1235 aa11.76□□□□□ -0.53
PAPD4-210ENST00000505770 ILDR1Q86SU0 546 aaPredicted RBP11.72□□□□□ -0.53
PAPD4-210ENST00000505770 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.71□□□□□ -0.53
PAPD4-210ENST00000505770 RNF25Q96BH1 459 aaPredicted RBP11.7□□□□□ -0.54
PAPD4-210ENST00000505770 L3MBTL3Q96JM7 780 aaPredicted RBP11.7□□□□□ -0.54
PAPD4-210ENST00000505770 RIOK3O14730 519 aaKnown RBP11.68□□□□□ -0.54
PAPD4-210ENST00000505770 DPY19L2Q6NUT2 758 aa11.68□□□□□ -0.54
PAPD4-210ENST00000505770 KDM2AQ9Y2K7 1162 aa11.68□□□□□ -0.54
PAPD4-210ENST00000505770 C3orf67Q6ZVT6 689 aa11.66□□□□□ -0.54
PAPD4-210ENST00000505770 EFCAB3Q8N7B9 438 aa11.65□□□□□ -0.54
PAPD4-210ENST00000505770 BBXQ8WY36 941 aaPredicted RBP11.65□□□□□ -0.54
PAPD4-210ENST00000505770 PLSCR2Q9NRY7 297 aa11.65□□□□□ -0.54
PAPD4-210ENST00000505770 ST18O60284 1047 aa11.63□□□□□ -0.55
PAPD4-210ENST00000505770 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.62□□□□□ -0.55
PAPD4-210ENST00000505770 ZFP91Q96JP5 570 aaPredicted RBP11.62□□□□□ -0.55
PAPD4-210ENST00000505770 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.62□□□□□ -0.55
PAPD4-210ENST00000505770 VGFO15240 615 aaPredicted RBP11.61□□□□□ -0.55
PAPD4-210ENST00000505770 ECM2O94769 699 aaPredicted RBP11.61□□□□□ -0.55
PAPD4-210ENST00000505770 PAXIP1Q6ZW49 1069 aaPredicted RBP11.6□□□□□ -0.55
PAPD4-210ENST00000505770 PCDH10Q9P2E7 1040 aa11.6□□□□□ -0.55
PAPD4-210ENST00000505770 TPRNQ4KMQ1 711 aa11.58□□□□□ -0.56
PAPD4-210ENST00000505770 BOLA1Q9Y3E2 137 aa11.58□□□□□ -0.56
PAPD4-210ENST00000505770 SNPHO15079 494 aa11.57□□□□□ -0.56
PAPD4-210ENST00000505770 G3V3G9 751 aa11.55□□□□□ -0.56
PAPD4-210ENST00000505770 CFAP44Q96MT7 982 aa11.55□□□□□ -0.56
PAPD4-210ENST00000505770 RGL2O15211 777 aa11.52□□□□□ -0.57
PAPD4-210ENST00000505770 SOX12O15370 315 aa11.52□□□□□ -0.57
PAPD4-210ENST00000505770 TMEM121BQ9BXQ6 578 aaPredicted RBP11.51□□□□□ -0.57
PAPD4-210ENST00000505770 MS4A4AQ96JQ5 239 aa11.5□□□□□ -0.57
PAPD4-210ENST00000505770 PHF8Q9UPP1 1060 aa11.5□□□□□ -0.57
PAPD4-210ENST00000505770 CDAN1Q8IWY9 1227 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms