RNA–Protein interactions for RNA: ENST00000505138.1

PHF3-207, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-207ENST00000505138 FARP1Q9Y4F1 1045 aaPredicted RBP9.46□□□□□ -0.9
PHF3-207ENST00000505138 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.45□□□□□ -0.9
PHF3-207ENST00000505138 SPOCK2Q92563 424 aa9.44□□□□□ -0.9
PHF3-207ENST00000505138 ABCC9O60706 1549 aa9.42□□□□□ -0.9
PHF3-207ENST00000505138 KLHL34Q8N239 644 aa9.42□□□□□ -0.9
PHF3-207ENST00000505138 TAOK2Q9UL54 1235 aa9.42□□□□□ -0.9
PHF3-207ENST00000505138 ZNF579Q8NAF0 562 aaKnown RBP9.4□□□□□ -0.9
PHF3-207ENST00000505138 PRKCSHP14314 528 aaPredicted RBP9.39□□□□□ -0.91
PHF3-207ENST00000505138 STAG3Q9UJ98 1225 aa9.39□□□□□ -0.91
PHF3-207ENST00000505138 ECM2O94769 699 aaPredicted RBP9.38□□□□□ -0.91
PHF3-207ENST00000505138 PCDH10Q9P2E7 1040 aa9.36□□□□□ -0.91
PHF3-207ENST00000505138 KDM2AQ9Y2K7 1162 aa9.36□□□□□ -0.91
PHF3-207ENST00000505138 NPM1P06748 294 aaKnown RBP eCLIP9.35□□□□□ -0.91
PHF3-207ENST00000505138 PAXIP1Q6ZW49 1069 aaPredicted RBP9.35□□□□□ -0.91
PHF3-207ENST00000505138 CFAP44Q96MT7 982 aa9.31□□□□□ -0.92
PHF3-207ENST00000505138 ZRANB1Q9UGI0 708 aa9.3□□□□□ -0.92
PHF3-207ENST00000505138 PLCD3Q8N3E9 789 aa9.29□□□□□ -0.92
PHF3-207ENST00000505138 SPRYD3Q8NCJ5 442 aa9.29□□□□□ -0.92
PHF3-207ENST00000505138 RGL2O15211 777 aa9.27□□□□□ -0.93
PHF3-207ENST00000505138 PAK3O75914 559 aaPredicted RBP9.27□□□□□ -0.93
PHF3-207ENST00000505138 POTEMA6NI47 508 aa9.26□□□□□ -0.93
PHF3-207ENST00000505138 MIER1Q8N108 512 aa9.26□□□□□ -0.93
PHF3-207ENST00000505138 OTUD5Q96G74 571 aa9.26□□□□□ -0.93
PHF3-207ENST00000505138 TPRNQ4KMQ1 711 aa9.25□□□□□ -0.93
PHF3-207ENST00000505138 POTEGQ6S5H5 508 aa9.21□□□□□ -0.94
PHF3-207ENST00000505138 TSHZ2Q9NRE2 1034 aa9.21□□□□□ -0.94
PHF3-207ENST00000505138 PLEKHG5O94827 1062 aa9.2□□□□□ -0.94
PHF3-207ENST00000505138 GALR2O43603 387 aaPredicted RBP9.19□□□□□ -0.94
PHF3-207ENST00000505138 MAMSTRQ6ZN01 415 aa9.19□□□□□ -0.94
PHF3-207ENST00000505138 ZBTB47Q9UFB7 747 aaPredicted RBP9.17□□□□□ -0.94
PHF3-207ENST00000505138 CHGAP10645 457 aaKnown RBP9.16□□□□□ -0.94
PHF3-207ENST00000505138 CREBZFQ9NS37 354 aa9.16□□□□□ -0.94
PHF3-207ENST00000505138 TRIM41Q8WV44 630 aa9.15□□□□□ -0.94
PHF3-207ENST00000505138 CIZ1Q9ULV3 898 aaPredicted RBP9.15□□□□□ -0.94
PHF3-207ENST00000505138 POTEB2H3BUK9 544 aa9.12□□□□□ -0.95
PHF3-207ENST00000505138 C7P10643 843 aa9.12□□□□□ -0.95
PHF3-207ENST00000505138 DNAJC5Q9H3Z4 198 aa9.12□□□□□ -0.95
PHF3-207ENST00000505138 SLC39A7Q92504 469 aa9.11□□□□□ -0.95
PHF3-207ENST00000505138 ASTLQ6HA08 431 aaPredicted RBP9.08□□□□□ -0.96
PHF3-207ENST00000505138 HS6ST3Q8IZP7 471 aa9.07□□□□□ -0.96
PHF3-207ENST00000505138 UNC13AQ9UPW8 1703 aa9.07□□□□□ -0.96
PHF3-207ENST00000505138 METRNQ9UJH8 293 aa9.06□□□□□ -0.96
PHF3-207ENST00000505138 NBR1Q14596 966 aa9.05□□□□□ -0.96
PHF3-207ENST00000505138 SCUBE2Q9NQ36 999 aa9.05□□□□□ -0.96
PHF3-207ENST00000505138 PHF12Q96QT6 1004 aa9.04□□□□□ -0.96
PHF3-207ENST00000505138 GSE1Q14687 1217 aa9.03□□□□□ -0.96
PHF3-207ENST00000505138 ATMINO43313 823 aaPredicted RBP9□□□□□ -0.97
PHF3-207ENST00000505138 PELP1Q8IZL8 1130 aaKnown RBP9□□□□□ -0.97
PHF3-207ENST00000505138 RB1CC1Q8TDY2 1594 aa8.96□□□□□ -0.97
PHF3-207ENST00000505138 RNF25Q96BH1 459 aaPredicted RBP8.96□□□□□ -0.98
PHF3-207ENST00000505138 NUBP1P53384 320 aa8.94□□□□□ -0.98
PHF3-207ENST00000505138 MS4A3Q96HJ5 214 aa8.94□□□□□ -0.98
PHF3-207ENST00000505138 RIOK3O14730 519 aaKnown RBP8.93□□□□□ -0.98
PHF3-207ENST00000505138 GTPBP6O43824 516 aaPredicted RBP8.93□□□□□ -0.98
PHF3-207ENST00000505138 MNX1P50219 401 aaPredicted RBP8.93□□□□□ -0.98
PHF3-207ENST00000505138 NKX1-1Q15270 411 aaPredicted RBP8.93□□□□□ -0.98
PHF3-207ENST00000505138 DCAF8Q5TAQ9 597 aa8.93□□□□□ -0.98
PHF3-207ENST00000505138 FAM163AQ96GL9 167 aaPredicted RBP8.93□□□□□ -0.98
PHF3-207ENST00000505138 NACADO15069 1562 aa8.92□□□□□ -0.98
PHF3-207ENST00000505138 BICRAQ9NZM4 1560 aa8.91□□□□□ -0.98
PHF3-207ENST00000505138 POTEJP0CG39 1038 aa8.9□□□□□ -0.98
PHF3-207ENST00000505138 LCE2DQ5TA82 110 aaPredicted RBP8.89□□□□□ -0.99
PHF3-207ENST00000505138 CHRM1P11229 460 aaPredicted RBP8.88□□□□□ -0.99
PHF3-207ENST00000505138 VGFO15240 615 aaPredicted RBP8.87□□□□□ -0.99
PHF3-207ENST00000505138 SGIP1Q9BQI5 828 aa8.87□□□□□ -0.99
PHF3-207ENST00000505138 STK25O00506 426 aa8.85□□□□□ -0.99
PHF3-207ENST00000505138 TSPYL2Q9H2G4 693 aaPredicted RBP8.85□□□□□ -0.99
PHF3-207ENST00000505138 RYDENQ9NUL5 291 aaKnown RBP8.85□□□□□ -0.99
PHF3-207ENST00000505138 TIE1P35590 1138 aa8.84□□□□□ -0.99
PHF3-207ENST00000505138 ATN1P54259 1190 aaPredicted RBP8.84□□□□□ -0.99
PHF3-207ENST00000505138 ZCCHC6Q5VYS8 1495 aaKnown RBP8.83□□□□□ -1
PHF3-207ENST00000505138 FAM212AQ96EL1 285 aa8.83□□□□□ -1
PHF3-207ENST00000505138 GTF3C3Q9Y5Q9 886 aa8.83□□□□□ -1
PHF3-207ENST00000505138 MYO15BQ96JP2 1530 aa8.83□□□□□ -1
PHF3-207ENST00000505138 CDAN1Q8IWY9 1227 aa8.82□□□□□ -1
PHF3-207ENST00000505138 CCDC61Q9Y6R9 512 aa8.82□□□□□ -1
PHF3-207ENST00000505138 ERICH6Q7L0X2 663 aa8.81□□□□□ -1
PHF3-207ENST00000505138 SEC24BO95487 1268 aa8.79□□□□□ -1
PHF3-207ENST00000505138 KIF12Q96FN5 646 aa8.79□□□□□ -1
PHF3-207ENST00000505138 IER5LQ5T953 404 aa8.78□□□□□ -1
PHF3-207ENST00000505138 TULP1O00294 542 aaPredicted RBP8.77□□□□□ -1.01
PHF3-207ENST00000505138 BMP2KQ9NSY1 1161 aaPredicted RBP8.77□□□□□ -1.01
PHF3-207ENST00000505138 TIMELESSQ9UNS1 1208 aa8.77□□□□□ -1.01
PHF3-207ENST00000505138 BCL11BQ9C0K0 894 aaPredicted RBP8.76□□□□□ -1.01
PHF3-207ENST00000505138 STK24Q9Y6E0 443 aa8.76□□□□□ -1.01
PHF3-207ENST00000505138 DCAF1Q9Y4B6 1507 aa8.75□□□□□ -1.01
PHF3-207ENST00000505138 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.75□□□□□ -1.01
PHF3-207ENST00000505138 TMEM132AQ24JP5 1023 aa8.75□□□□□ -1.01
PHF3-207ENST00000505138 RASEFQ8IZ41 740 aa8.75□□□□□ -1.01
PHF3-207ENST00000505138 ZFP91Q96JP5 570 aaPredicted RBP8.75□□□□□ -1.01
PHF3-207ENST00000505138 POTEFA5A3E0 1075 aa8.74□□□□□ -1.01
PHF3-207ENST00000505138 P3H3Q8IVL6 736 aa8.74□□□□□ -1.01
PHF3-207ENST00000505138 TMEM121BQ9BXQ6 578 aaPredicted RBP8.71□□□□□ -1.02
PHF3-207ENST00000505138 SCRIBQ14160 1630 aa8.69□□□□□ -1.02
PHF3-207ENST00000505138 WDR70Q9NW82 654 aa8.69□□□□□ -1.02
PHF3-207ENST00000505138 TTLL13PA6NNM8 815 aa8.68□□□□□ -1.02
PHF3-207ENST00000505138 MAP3K13O43283 966 aa8.68□□□□□ -1.02
PHF3-207ENST00000505138 PYGBP11216 843 aa8.68□□□□□ -1.02
PHF3-207ENST00000505138 SNPHO15079 494 aa8.66□□□□□ -1.02
PHF3-207ENST00000505138 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms