RNA–Protein interactions for RNA: ENST00000504982.1

PAPD4-208, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 2

Gene PAPD4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-208ENST00000504982 CCDC61Q9Y6R9 512 aa10.15□□□□□ -0.78
PAPD4-208ENST00000504982 ATMINO43313 823 aaPredicted RBP10.14□□□□□ -0.79
PAPD4-208ENST00000504982 SLC39A7Q92504 469 aa10.13□□□□□ -0.79
PAPD4-208ENST00000504982 PLEKHG5O94827 1062 aa10.12□□□□□ -0.79
PAPD4-208ENST00000504982 C7P10643 843 aa10.1□□□□□ -0.79
PAPD4-208ENST00000504982 KIF12Q96FN5 646 aa10.08□□□□□ -0.8
PAPD4-208ENST00000504982 MIER1Q8N108 512 aa10.07□□□□□ -0.8
PAPD4-208ENST00000504982 ATN1P54259 1190 aaPredicted RBP10.05□□□□□ -0.8
PAPD4-208ENST00000504982 RASEFQ8IZ41 740 aa10.05□□□□□ -0.8
PAPD4-208ENST00000504982 PLSCR2Q9NRY7 297 aa10.05□□□□□ -0.8
PAPD4-208ENST00000504982 BMP2KQ9NSY1 1161 aaPredicted RBP10.04□□□□□ -0.8
PAPD4-208ENST00000504982 MAMSTRQ6ZN01 415 aa10.03□□□□□ -0.8
PAPD4-208ENST00000504982 MAP3K13O43283 966 aa10.02□□□□□ -0.81
PAPD4-208ENST00000504982 POTEJP0CG39 1038 aa10.02□□□□□ -0.81
PAPD4-208ENST00000504982 PLCD3Q8N3E9 789 aa10.01□□□□□ -0.81
PAPD4-208ENST00000504982 TRPC6Q9Y210 931 aa10.01□□□□□ -0.81
PAPD4-208ENST00000504982 POTEMA6NI47 508 aa10□□□□□ -0.81
PAPD4-208ENST00000504982 TIE1P35590 1138 aa10□□□□□ -0.81
PAPD4-208ENST00000504982 POTEGQ6S5H5 508 aa9.97□□□□□ -0.81
PAPD4-208ENST00000504982 SCUBE2Q9NQ36 999 aa9.97□□□□□ -0.81
PAPD4-208ENST00000504982 ZBTB47Q9UFB7 747 aaPredicted RBP9.96□□□□□ -0.82
PAPD4-208ENST00000504982 POTEFA5A3E0 1075 aa9.94□□□□□ -0.82
PAPD4-208ENST00000504982 TTLL13PA6NNM8 815 aa9.93□□□□□ -0.82
PAPD4-208ENST00000504982 NUBP1P53384 320 aa9.91□□□□□ -0.82
PAPD4-208ENST00000504982 SGIP1Q9BQI5 828 aa9.91□□□□□ -0.82
PAPD4-208ENST00000504982 PCDHB13Q9Y5F0 798 aa9.91□□□□□ -0.82
PAPD4-208ENST00000504982 FKBP8Q14318 412 aa9.89□□□□□ -0.83
PAPD4-208ENST00000504982 FAM212AQ96EL1 285 aa9.89□□□□□ -0.83
PAPD4-208ENST00000504982 SEC24BO95487 1268 aa9.88□□□□□ -0.83
PAPD4-208ENST00000504982 IER5LQ5T953 404 aa9.87□□□□□ -0.83
PAPD4-208ENST00000504982 TRIM35Q9UPQ4 493 aa9.87□□□□□ -0.83
PAPD4-208ENST00000504982 COLQQ9Y215 455 aaPredicted RBP9.87□□□□□ -0.83
PAPD4-208ENST00000504982 LCE2DQ5TA82 110 aaPredicted RBP9.86□□□□□ -0.83
PAPD4-208ENST00000504982 IFNL1Q8IU54 200 aa9.85□□□□□ -0.83
PAPD4-208ENST00000504982 PCDH10Q9P2E7 1040 aa9.83□□□□□ -0.84
PAPD4-208ENST00000504982 FAM163AQ96GL9 167 aaPredicted RBP9.82□□□□□ -0.84
PAPD4-208ENST00000504982 TMEM106CQ9BVX2 250 aa9.81□□□□□ -0.84
PAPD4-208ENST00000504982 PLCG2P16885 1265 aa9.75□□□□□ -0.85
PAPD4-208ENST00000504982 FBXO3Q9UK99 471 aa9.74□□□□□ -0.85
PAPD4-208ENST00000504982 DCAF8Q5TAQ9 597 aa9.73□□□□□ -0.85
PAPD4-208ENST00000504982 PYGBP11216 843 aa9.72□□□□□ -0.85
PAPD4-208ENST00000504982 IRX5P78411 483 aaPredicted RBP9.71□□□□□ -0.86
PAPD4-208ENST00000504982 SLAIN1Q8ND83 568 aa9.71□□□□□ -0.86
PAPD4-208ENST00000504982 PCDHB8Q9UN66 801 aa9.67□□□□□ -0.86
PAPD4-208ENST00000504982 VASPP50552 380 aaPredicted RBP9.65□□□□□ -0.86
PAPD4-208ENST00000504982 OCEL1Q9H607 264 aa9.65□□□□□ -0.86
PAPD4-208ENST00000504982 ST18O60284 1047 aa9.62□□□□□ -0.87
PAPD4-208ENST00000504982 GSE1Q14687 1217 aa9.62□□□□□ -0.87
PAPD4-208ENST00000504982 CDAN1Q8IWY9 1227 aa9.62□□□□□ -0.87
PAPD4-208ENST00000504982 ZNF467Q7Z7K2 595 aaPredicted RBP9.61□□□□□ -0.87
PAPD4-208ENST00000504982 KLHL34Q8N239 644 aa9.61□□□□□ -0.87
PAPD4-208ENST00000504982 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.58□□□□□ -0.88
PAPD4-208ENST00000504982 PDCD7Q8N8D1 485 aaKnown RBP9.56□□□□□ -0.88
PAPD4-208ENST00000504982 SNPHO15079 494 aa9.55□□□□□ -0.88
PAPD4-208ENST00000504982 GOLGA2Q08379 1002 aa9.55□□□□□ -0.88
PAPD4-208ENST00000504982 CHRM1P11229 460 aaPredicted RBP9.54□□□□□ -0.88
PAPD4-208ENST00000504982 MKRN3Q13064 507 aaKnown RBP9.54□□□□□ -0.88
PAPD4-208ENST00000504982 TMEM121BQ9BXQ6 578 aaPredicted RBP9.54□□□□□ -0.88
PAPD4-208ENST00000504982 C3orf67Q6ZVT6 689 aa9.52□□□□□ -0.89
PAPD4-208ENST00000504982 PSEN1P49768 467 aa9.51□□□□□ -0.89
PAPD4-208ENST00000504982 L3MBTL3Q96JM7 780 aaPredicted RBP9.49□□□□□ -0.89
PAPD4-208ENST00000504982 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.48□□□□□ -0.891e-6■■■□□ 15.3
PAPD4-208ENST00000504982 PDAP1Q13442 181 aaKnown RBP9.46□□□□□ -0.9
PAPD4-208ENST00000504982 MARVELD3Q96A59 401 aa9.46□□□□□ -0.9
PAPD4-208ENST00000504982 SPOCK2Q92563 424 aa9.45□□□□□ -0.9
PAPD4-208ENST00000504982 ILDR1Q86SU0 546 aaPredicted RBP9.42□□□□□ -0.9
PAPD4-208ENST00000504982 CIZ1Q9ULV3 898 aaPredicted RBP9.42□□□□□ -0.9
PAPD4-208ENST00000504982 EMP3P54852 163 aa9.41□□□□□ -0.9
PAPD4-208ENST00000504982 IFNLR1Q8IU57 520 aaPredicted RBP9.41□□□□□ -0.9
PAPD4-208ENST00000504982 CABP2Q9NPB3 220 aa9.4□□□□□ -0.9
PAPD4-208ENST00000504982 SPNS2Q8IVW8 549 aa9.38□□□□□ -0.91
PAPD4-208ENST00000504982 G3V3G9 751 aa9.37□□□□□ -0.91
PAPD4-208ENST00000504982 MMRN1Q13201 1228 aa9.37□□□□□ -0.91
PAPD4-208ENST00000504982 DPY19L2Q6NUT2 758 aa9.36□□□□□ -0.91
PAPD4-208ENST00000504982 BOLA1Q9Y3E2 137 aa9.35□□□□□ -0.91
PAPD4-208ENST00000504982 HS3ST6Q96QI5 342 aa9.33□□□□□ -0.92
PAPD4-208ENST00000504982 TRIM41Q8WV44 630 aa9.32□□□□□ -0.92
PAPD4-208ENST00000504982 FAM205CA6NFA0 338 aa9.31□□□□□ -0.92
PAPD4-208ENST00000504982 POTEB3A0JP26 581 aa9.29□□□□□ -0.92
PAPD4-208ENST00000504982 HOXB3P14651 431 aaPredicted RBP9.29□□□□□ -0.92
PAPD4-208ENST00000504982 POTEBQ6S5H4 581 aa9.29□□□□□ -0.92
PAPD4-208ENST00000504982 KRTAP3-3Q9BYR6 98 aa9.29□□□□□ -0.92
PAPD4-208ENST00000504982 KRTAP3-2Q9BYR7 98 aa9.29□□□□□ -0.92
PAPD4-208ENST00000504982 EFCAB3Q8N7B9 438 aa9.26□□□□□ -0.93
PAPD4-208ENST00000504982 ZNF710Q8N1W2 664 aa9.25□□□□□ -0.93
PAPD4-208ENST00000504982 DOK7Q18PE1 504 aa9.24□□□□□ -0.93
PAPD4-208ENST00000504982 HOXB1P14653 301 aaPredicted RBP9.22□□□□□ -0.93
PAPD4-208ENST00000504982 MICALL2Q8IY33 904 aa9.2□□□□□ -0.94
PAPD4-208ENST00000504982 RIOK3O14730 519 aaKnown RBP9.19□□□□□ -0.94
PAPD4-208ENST00000504982 RIMBP2O15034 1052 aa9.19□□□□□ -0.94
PAPD4-208ENST00000504982 ERBB3P21860 1342 aa9.17□□□□□ -0.94
PAPD4-208ENST00000504982 RNF25Q96BH1 459 aaPredicted RBP9.17□□□□□ -0.94
PAPD4-208ENST00000504982 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.16□□□□□ -0.94
PAPD4-208ENST00000504982 SOX12O15370 315 aa9.16□□□□□ -0.94
PAPD4-208ENST00000504982 ZFP91Q96JP5 570 aaPredicted RBP9.16□□□□□ -0.94
PAPD4-208ENST00000504982 VGFO15240 615 aaPredicted RBP9.15□□□□□ -0.94
PAPD4-208ENST00000504982 TMEM92Q6UXU6 159 aa9.15□□□□□ -0.94
PAPD4-208ENST00000504982 MS4A4AQ96JQ5 239 aa9.14□□□□□ -0.95
PAPD4-208ENST00000504982 ZSWIM6Q9HCJ5 1215 aa9.14□□□□□ -0.95
PAPD4-208ENST00000504982 PHF8Q9UPP1 1060 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms