RNA–Protein interactions for RNA: ENST00000504859.5

GRAMD2B-204, Transcript of GRAM domain containing 2B, humanhuman

TSL 5

Gene GRAMD2B, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-204ENST00000504859 CCDC61Q9Y6R9 512 aa11.15□□□□□ -0.62
GRAMD2B-204ENST00000504859 GALR2O43603 387 aaPredicted RBP11.11□□□□□ -0.63
GRAMD2B-204ENST00000504859 CLCN6P51797 869 aa11.09□□□□□ -0.63
GRAMD2B-204ENST00000504859 FAM212AQ96EL1 285 aa11.09□□□□□ -0.63
GRAMD2B-204ENST00000504859 DCAF8Q5TAQ9 597 aa11.06□□□□□ -0.64
GRAMD2B-204ENST00000504859 SPOCK2Q92563 424 aa11.05□□□□□ -0.64
GRAMD2B-204ENST00000504859 KIF12Q96FN5 646 aa11.05□□□□□ -0.64
GRAMD2B-204ENST00000504859 MS4A3Q96HJ5 214 aa11.05□□□□□ -0.64
GRAMD2B-204ENST00000504859 MAP3K13O43283 966 aa11.03□□□□□ -0.64
GRAMD2B-204ENST00000504859 POTEIP0CG38 1075 aa11.03□□□□□ -0.64
GRAMD2B-204ENST00000504859 DCBLD2Q96PD2 775 aa11□□□□□ -0.65
GRAMD2B-204ENST00000504859 PYGBP11216 843 aa10.98□□□□□ -0.65
GRAMD2B-204ENST00000504859 GSE1Q14687 1217 aa10.96□□□□□ -0.65
GRAMD2B-204ENST00000504859 CIZ1Q9ULV3 898 aaPredicted RBP10.95□□□□□ -0.66
GRAMD2B-204ENST00000504859 TRPC6Q9Y210 931 aa10.95□□□□□ -0.66
GRAMD2B-204ENST00000504859 PCDHB13Q9Y5F0 798 aa10.95□□□□□ -0.66
GRAMD2B-204ENST00000504859 IFNL1Q8IU54 200 aa10.92□□□□□ -0.66
GRAMD2B-204ENST00000504859 SGIP1Q9BQI5 828 aa10.9□□□□□ -0.66
GRAMD2B-204ENST00000504859 ATMINO43313 823 aaPredicted RBP10.87□□□□□ -0.67
GRAMD2B-204ENST00000504859 ASTLQ6HA08 431 aaPredicted RBP10.87□□□□□ -0.67
GRAMD2B-204ENST00000504859 PELP1Q8IZL8 1130 aaKnown RBP10.87□□□□□ -0.67
GRAMD2B-204ENST00000504859 BMP2KQ9NSY1 1161 aaPredicted RBP10.87□□□□□ -0.67
GRAMD2B-204ENST00000504859 PCDHB8Q9UN66 801 aa10.86□□□□□ -0.67
GRAMD2B-204ENST00000504859 CHRM1P11229 460 aaPredicted RBP10.84□□□□□ -0.67
GRAMD2B-204ENST00000504859 ATN1P54259 1190 aaPredicted RBP10.84□□□□□ -0.67
GRAMD2B-204ENST00000504859 TIE1P35590 1138 aa10.83□□□□□ -0.68
GRAMD2B-204ENST00000504859 TTLL13PA6NNM8 815 aa10.81□□□□□ -0.68
GRAMD2B-204ENST00000504859 ZNF467Q7Z7K2 595 aaPredicted RBP10.78□□□□□ -0.68
GRAMD2B-204ENST00000504859 TMEM106CQ9BVX2 250 aa10.78□□□□□ -0.68
GRAMD2B-204ENST00000504859 TRIM41Q8WV44 630 aa10.75□□□□□ -0.69
GRAMD2B-204ENST00000504859 TRIM35Q9UPQ4 493 aa10.75□□□□□ -0.69
GRAMD2B-204ENST00000504859 METRNQ9UJH8 293 aa10.74□□□□□ -0.69
GRAMD2B-204ENST00000504859 LHX8Q68G74 356 aa10.73□□□□□ -0.69
GRAMD2B-204ENST00000504859 SLC39A7Q92504 469 aa10.73□□□□□ -0.69
GRAMD2B-204ENST00000504859 C7P10643 843 aa10.71□□□□□ -0.69
GRAMD2B-204ENST00000504859 PSEN1P49768 467 aa10.71□□□□□ -0.69
GRAMD2B-204ENST00000504859 RNF25Q96BH1 459 aaPredicted RBP10.71□□□□□ -0.69
GRAMD2B-204ENST00000504859 PKD2Q13563 968 aa10.7□□□□□ -0.7
GRAMD2B-204ENST00000504859 POTEB2H3BUK9 544 aa10.69□□□□□ -0.7
GRAMD2B-204ENST00000504859 PDAP1Q13442 181 aaKnown RBP10.68□□□□□ -0.7
GRAMD2B-204ENST00000504859 POTEFA5A3E0 1075 aa10.67□□□□□ -0.7
GRAMD2B-204ENST00000504859 ECM2O94769 699 aaPredicted RBP10.67□□□□□ -0.7
GRAMD2B-204ENST00000504859 RIOK3O14730 519 aaKnown RBP10.65□□□□□ -0.7
GRAMD2B-204ENST00000504859 COLQQ9Y215 455 aaPredicted RBP10.65□□□□□ -0.7
GRAMD2B-204ENST00000504859 IER5LQ5T953 404 aa10.63□□□□□ -0.71
GRAMD2B-204ENST00000504859 SEC24BO95487 1268 aa10.61□□□□□ -0.71
GRAMD2B-204ENST00000504859 POTEJP0CG39 1038 aa10.6□□□□□ -0.71
GRAMD2B-204ENST00000504859 RGL2O15211 777 aa10.59□□□□□ -0.71
GRAMD2B-204ENST00000504859 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.58□□□□□ -0.72
GRAMD2B-204ENST00000504859 IRX5P78411 483 aaPredicted RBP10.58□□□□□ -0.72
GRAMD2B-204ENST00000504859 GOLGA2Q08379 1002 aa10.58□□□□□ -0.72
GRAMD2B-204ENST00000504859 ZFP91Q96JP5 570 aaPredicted RBP10.58□□□□□ -0.72
GRAMD2B-204ENST00000504859 CABP2Q9NPB3 220 aa10.58□□□□□ -0.72
GRAMD2B-204ENST00000504859 VGFO15240 615 aaPredicted RBP10.57□□□□□ -0.72
GRAMD2B-204ENST00000504859 MKRN3Q13064 507 aaKnown RBP10.56□□□□□ -0.72
GRAMD2B-204ENST00000504859 PLCG2P16885 1265 aa10.55□□□□□ -0.72
GRAMD2B-204ENST00000504859 OTUD5Q96G74 571 aa10.55□□□□□ -0.72
GRAMD2B-204ENST00000504859 OCEL1Q9H607 264 aa10.53□□□□□ -0.72
GRAMD2B-204ENST00000504859 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.51□□□□□ -0.733e-6■■■■■ 28.3
GRAMD2B-204ENST00000504859 EFCAB3Q8N7B9 438 aa10.5□□□□□ -0.73
GRAMD2B-204ENST00000504859 PDCD7Q8N8D1 485 aaKnown RBP10.5□□□□□ -0.73
GRAMD2B-204ENST00000504859 BCL11BQ9C0K0 894 aaPredicted RBP10.49□□□□□ -0.73
GRAMD2B-204ENST00000504859 STK25O00506 426 aa10.47□□□□□ -0.73
GRAMD2B-204ENST00000504859 TAOK2Q9UL54 1235 aa10.47□□□□□ -0.73
GRAMD2B-204ENST00000504859 ILDR1Q86SU0 546 aaPredicted RBP10.46□□□□□ -0.73
GRAMD2B-204ENST00000504859 STK24Q9Y6E0 443 aa10.46□□□□□ -0.73
GRAMD2B-204ENST00000504859 DPY19L2Q6NUT2 758 aa10.44□□□□□ -0.74
GRAMD2B-204ENST00000504859 MAMSTRQ6ZN01 415 aa10.44□□□□□ -0.74
GRAMD2B-204ENST00000504859 SCUBE2Q9NQ36 999 aa10.44□□□□□ -0.74
GRAMD2B-204ENST00000504859 PHF8Q9UPP1 1060 aa10.4□□□□□ -0.74
GRAMD2B-204ENST00000504859 SOX12O15370 315 aa10.38□□□□□ -0.75
GRAMD2B-204ENST00000504859 MS4A4AQ96JQ5 239 aa10.37□□□□□ -0.75
GRAMD2B-204ENST00000504859 CHGAP10645 457 aaKnown RBP10.35□□□□□ -0.75
GRAMD2B-204ENST00000504859 L3MBTL3Q96JM7 780 aaPredicted RBP10.35□□□□□ -0.75
GRAMD2B-204ENST00000504859 MFRPQ9BY79 579 aa10.34□□□□□ -0.75
GRAMD2B-204ENST00000504859 HS6ST3Q8IZP7 471 aa10.33□□□□□ -0.76
GRAMD2B-204ENST00000504859 SLAIN1Q8ND83 568 aa10.33□□□□□ -0.76
GRAMD2B-204ENST00000504859 FBXO22Q8NEZ5 403 aa10.33□□□□□ -0.76
GRAMD2B-204ENST00000504859 BOLA1Q9Y3E2 137 aa10.33□□□□□ -0.76
GRAMD2B-204ENST00000504859 RTN4Q9NQC3 1192 aaKnown RBP10.32□□□□□ -0.76
GRAMD2B-204ENST00000504859 NLRP6P59044 892 aa10.31□□□□□ -0.76
GRAMD2B-204ENST00000504859 C3orf67Q6ZVT6 689 aa10.31□□□□□ -0.76
GRAMD2B-204ENST00000504859 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.31□□□□□ -0.76
GRAMD2B-204ENST00000504859 DCAF8L2P0C7V8 631 aa10.3□□□□□ -0.76
GRAMD2B-204ENST00000504859 AMER1Q5JTC6 1135 aaPredicted RBP10.3□□□□□ -0.76
GRAMD2B-204ENST00000504859 G3V3G9 751 aa10.29□□□□□ -0.76
GRAMD2B-204ENST00000504859 TMEM121BQ9BXQ6 578 aaPredicted RBP10.27□□□□□ -0.77
GRAMD2B-204ENST00000504859 MICALL2Q8IY33 904 aa10.26□□□□□ -0.77
GRAMD2B-204ENST00000504859 NKX1-1Q15270 411 aaPredicted RBP10.24□□□□□ -0.77
GRAMD2B-204ENST00000504859 FAM163AQ96GL9 167 aaPredicted RBP10.21□□□□□ -0.77
GRAMD2B-204ENST00000504859 PPP1R37O75864 691 aa10.2□□□□□ -0.78
GRAMD2B-204ENST00000504859 DNAJC5Q9H3Z4 198 aa10.2□□□□□ -0.78
GRAMD2B-204ENST00000504859 LCE2DQ5TA82 110 aaPredicted RBP10.19□□□□□ -0.78
GRAMD2B-204ENST00000504859 TMEM92Q6UXU6 159 aa10.19□□□□□ -0.78
GRAMD2B-204ENST00000504859 ST18O60284 1047 aa10.11□□□□□ -0.79
GRAMD2B-204ENST00000504859 SNPHO15079 494 aa10.1□□□□□ -0.79
GRAMD2B-204ENST00000504859 POTEMA6NI47 508 aa10.09□□□□□ -0.79
GRAMD2B-204ENST00000504859 GTPBP6O43824 516 aaPredicted RBP10.09□□□□□ -0.79
GRAMD2B-204ENST00000504859 POTEGQ6S5H5 508 aa10.08□□□□□ -0.8
GRAMD2B-204ENST00000504859 C2orf72A6NCS6 295 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms