RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 FAM212AQ96EL1 285 aa11.01□□□□□ -0.65
PDLIM1P4-201ENST00000504327 CCDC61Q9Y6R9 512 aa11□□□□□ -0.65
PDLIM1P4-201ENST00000504327 GABBR2O75899 941 aa10.97□□□□□ -0.65
PDLIM1P4-201ENST00000504327 DCAF8Q5TAQ9 597 aa10.97□□□□□ -0.65
PDLIM1P4-201ENST00000504327 GSE1Q14687 1217 aa10.91□□□□□ -0.66
PDLIM1P4-201ENST00000504327 CIZ1Q9ULV3 898 aaPredicted RBP10.91□□□□□ -0.66
PDLIM1P4-201ENST00000504327 GALR2O43603 387 aaPredicted RBP10.9□□□□□ -0.66
PDLIM1P4-201ENST00000504327 KIF12Q96FN5 646 aa10.9□□□□□ -0.66
PDLIM1P4-201ENST00000504327 MS4A3Q96HJ5 214 aa10.89□□□□□ -0.67
PDLIM1P4-201ENST00000504327 PYGBP11216 843 aa10.88□□□□□ -0.67
PDLIM1P4-201ENST00000504327 MAP3K13O43283 966 aa10.87□□□□□ -0.67
PDLIM1P4-201ENST00000504327 CLCN6P51797 869 aa10.87□□□□□ -0.67
PDLIM1P4-201ENST00000504327 PCDHB13Q9Y5F0 798 aa10.82□□□□□ -0.68
PDLIM1P4-201ENST00000504327 TRPC6Q9Y210 931 aa10.79□□□□□ -0.68
PDLIM1P4-201ENST00000504327 IFNL1Q8IU54 200 aa10.78□□□□□ -0.68
PDLIM1P4-201ENST00000504327 SGIP1Q9BQI5 828 aa10.77□□□□□ -0.69
PDLIM1P4-201ENST00000504327 POTEIP0CG38 1075 aa10.76□□□□□ -0.69
PDLIM1P4-201ENST00000504327 CHRM1P11229 460 aaPredicted RBP10.76□□□□□ -0.69
PDLIM1P4-201ENST00000504327 DCBLD2Q96PD2 775 aa10.76□□□□□ -0.69
PDLIM1P4-201ENST00000504327 PCDHB8Q9UN66 801 aa10.75□□□□□ -0.69
PDLIM1P4-201ENST00000504327 PKD2Q13563 968 aa10.73□□□□□ -0.69
PDLIM1P4-201ENST00000504327 TRIM41Q8WV44 630 aa10.73□□□□□ -0.69
PDLIM1P4-201ENST00000504327 ZNF467Q7Z7K2 595 aaPredicted RBP10.7□□□□□ -0.7
PDLIM1P4-201ENST00000504327 BMP2KQ9NSY1 1161 aaPredicted RBP10.7□□□□□ -0.7
PDLIM1P4-201ENST00000504327 ECM2O94769 699 aaPredicted RBP10.69□□□□□ -0.7
PDLIM1P4-201ENST00000504327 TIE1P35590 1138 aa10.68□□□□□ -0.7
PDLIM1P4-201ENST00000504327 ATMINO43313 823 aaPredicted RBP10.67□□□□□ -0.7
PDLIM1P4-201ENST00000504327 ASTLQ6HA08 431 aaPredicted RBP10.67□□□□□ -0.7
PDLIM1P4-201ENST00000504327 RNF25Q96BH1 459 aaPredicted RBP10.67□□□□□ -0.7
PDLIM1P4-201ENST00000504327 TTLL13PA6NNM8 815 aa10.65□□□□□ -0.7
PDLIM1P4-201ENST00000504327 ATN1P54259 1190 aaPredicted RBP10.65□□□□□ -0.7
PDLIM1P4-201ENST00000504327 PELP1Q8IZL8 1130 aaKnown RBP10.64□□□□□ -0.71
PDLIM1P4-201ENST00000504327 TMEM106CQ9BVX2 250 aa10.64□□□□□ -0.71
PDLIM1P4-201ENST00000504327 RIOK3O14730 519 aaKnown RBP10.61□□□□□ -0.71
PDLIM1P4-201ENST00000504327 RGL2O15211 777 aa10.61□□□□□ -0.71
PDLIM1P4-201ENST00000504327 PSEN1P49768 467 aa10.61□□□□□ -0.71
PDLIM1P4-201ENST00000504327 PDAP1Q13442 181 aaKnown RBP10.6□□□□□ -0.71
PDLIM1P4-201ENST00000504327 TRIM35Q9UPQ4 493 aa10.59□□□□□ -0.71
PDLIM1P4-201ENST00000504327 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.54□□□□□ -0.72
PDLIM1P4-201ENST00000504327 VGFO15240 615 aaPredicted RBP10.54□□□□□ -0.72
PDLIM1P4-201ENST00000504327 ZFP91Q96JP5 570 aaPredicted RBP10.54□□□□□ -0.72
PDLIM1P4-201ENST00000504327 METRNQ9UJH8 293 aa10.54□□□□□ -0.72
PDLIM1P4-201ENST00000504327 SLC39A7Q92504 469 aa10.53□□□□□ -0.72
PDLIM1P4-201ENST00000504327 RTN4Q9NQC3 1192 aaKnown RBP10.52□□□□□ -0.73
PDLIM1P4-201ENST00000504327 AMER1Q5JTC6 1135 aaPredicted RBP10.51□□□□□ -0.73
PDLIM1P4-201ENST00000504327 CABP2Q9NPB3 220 aa10.5□□□□□ -0.73
PDLIM1P4-201ENST00000504327 C7P10643 843 aa10.49□□□□□ -0.73
PDLIM1P4-201ENST00000504327 GOLGA2Q08379 1002 aa10.48□□□□□ -0.73
PDLIM1P4-201ENST00000504327 IER5LQ5T953 404 aa10.47□□□□□ -0.73
PDLIM1P4-201ENST00000504327 TAOK2Q9UL54 1235 aa10.47□□□□□ -0.73
PDLIM1P4-201ENST00000504327 POTEFA5A3E0 1075 aa10.46□□□□□ -0.73
PDLIM1P4-201ENST00000504327 BCL11BQ9C0K0 894 aaPredicted RBP10.46□□□□□ -0.73
PDLIM1P4-201ENST00000504327 STK25O00506 426 aa10.45□□□□□ -0.74
PDLIM1P4-201ENST00000504327 COLQQ9Y215 455 aaPredicted RBP10.45□□□□□ -0.74
PDLIM1P4-201ENST00000504327 MKRN3Q13064 507 aaKnown RBP10.44□□□□□ -0.74
PDLIM1P4-201ENST00000504327 STK24Q9Y6E0 443 aa10.44□□□□□ -0.74
PDLIM1P4-201ENST00000504327 SEC24BO95487 1268 aa10.43□□□□□ -0.74
PDLIM1P4-201ENST00000504327 POTEB2H3BUK9 544 aa10.42□□□□□ -0.74
PDLIM1P4-201ENST00000504327 IRX5P78411 483 aaPredicted RBP10.42□□□□□ -0.74
PDLIM1P4-201ENST00000504327 LHX8Q68G74 356 aa10.42□□□□□ -0.74
PDLIM1P4-201ENST00000504327 EFCAB3Q8N7B9 438 aa10.42□□□□□ -0.74
PDLIM1P4-201ENST00000504327 DCAF8L2P0C7V8 631 aa10.4□□□□□ -0.74
PDLIM1P4-201ENST00000504327 PLCG2P16885 1265 aa10.4□□□□□ -0.74
PDLIM1P4-201ENST00000504327 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.38□□□□□ -0.75
PDLIM1P4-201ENST00000504327 PDCD7Q8N8D1 485 aaKnown RBP10.37□□□□□ -0.75
PDLIM1P4-201ENST00000504327 OCEL1Q9H607 264 aa10.37□□□□□ -0.75
PDLIM1P4-201ENST00000504327 CHGAP10645 457 aaKnown RBP10.36□□□□□ -0.75
PDLIM1P4-201ENST00000504327 HS6ST3Q8IZP7 471 aa10.36□□□□□ -0.75
PDLIM1P4-201ENST00000504327 POTEJP0CG39 1038 aa10.35□□□□□ -0.75
PDLIM1P4-201ENST00000504327 ILDR1Q86SU0 546 aaPredicted RBP10.33□□□□□ -0.76
PDLIM1P4-201ENST00000504327 PHF8Q9UPP1 1060 aa10.32□□□□□ -0.76
PDLIM1P4-201ENST00000504327 DPY19L2Q6NUT2 758 aa10.31□□□□□ -0.76
PDLIM1P4-201ENST00000504327 SOX12O15370 315 aa10.3□□□□□ -0.76
PDLIM1P4-201ENST00000504327 MFRPQ9BY79 579 aa10.29□□□□□ -0.76
PDLIM1P4-201ENST00000504327 MS4A4AQ96JQ5 239 aa10.28□□□□□ -0.76
PDLIM1P4-201ENST00000504327 FBXO22Q8NEZ5 403 aa10.27□□□□□ -0.77
PDLIM1P4-201ENST00000504327 OTUD5Q96G74 571 aa10.27□□□□□ -0.77
PDLIM1P4-201ENST00000504327 NLRP6P59044 892 aa10.25□□□□□ -0.77
PDLIM1P4-201ENST00000504327 NKX1-1Q15270 411 aaPredicted RBP10.24□□□□□ -0.77
PDLIM1P4-201ENST00000504327 SCUBE2Q9NQ36 999 aa10.23□□□□□ -0.77
PDLIM1P4-201ENST00000504327 MAMSTRQ6ZN01 415 aa10.22□□□□□ -0.77
PDLIM1P4-201ENST00000504327 DNAJC5Q9H3Z4 198 aa10.22□□□□□ -0.77
PDLIM1P4-201ENST00000504327 L3MBTL3Q96JM7 780 aaPredicted RBP10.21□□□□□ -0.77
PDLIM1P4-201ENST00000504327 BOLA1Q9Y3E2 137 aa10.2□□□□□ -0.78
PDLIM1P4-201ENST00000504327 G3V3G9 751 aa10.18□□□□□ -0.78
PDLIM1P4-201ENST00000504327 C3orf67Q6ZVT6 689 aa10.16□□□□□ -0.78
PDLIM1P4-201ENST00000504327 MICALL2Q8IY33 904 aa10.16□□□□□ -0.78
PDLIM1P4-201ENST00000504327 PPP1R37O75864 691 aa10.15□□□□□ -0.78
PDLIM1P4-201ENST00000504327 TMEM121BQ9BXQ6 578 aaPredicted RBP10.14□□□□□ -0.79
PDLIM1P4-201ENST00000504327 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.14□□□□□ -0.79
PDLIM1P4-201ENST00000504327 SLAIN1Q8ND83 568 aa10.13□□□□□ -0.79
PDLIM1P4-201ENST00000504327 GTPBP6O43824 516 aaPredicted RBP10.1□□□□□ -0.79
PDLIM1P4-201ENST00000504327 BBXQ8WY36 941 aaPredicted RBP10.1□□□□□ -0.79
PDLIM1P4-201ENST00000504327 RYDENQ9NUL5 291 aaKnown RBP10.08□□□□□ -0.8
PDLIM1P4-201ENST00000504327 TMEM92Q6UXU6 159 aa10.07□□□□□ -0.8
PDLIM1P4-201ENST00000504327 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.02□□□□□ -0.81
PDLIM1P4-201ENST00000504327 PAXIP1Q6ZW49 1069 aaPredicted RBP9.98□□□□□ -0.81
PDLIM1P4-201ENST00000504327 CFAP44Q96MT7 982 aa9.98□□□□□ -0.81
PDLIM1P4-201ENST00000504327 SPRYD3Q8NCJ5 442 aa9.97□□□□□ -0.81
PDLIM1P4-201ENST00000504327 C2orf72A6NCS6 295 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms