RNA–Protein interactions for RNA: ENST00000504287.1

LINC02488-201, Transcript of long intergenic non-protein coding RNA 2488, humanhuman

TSL 2 BASIC

Gene LINC02488, Length 652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02488-201ENST00000504287 GSE1Q14687 1217 aa17.85■□□□□ 0.45
LINC02488-201ENST00000504287 DCAF8Q5TAQ9 597 aa17.85■□□□□ 0.45
LINC02488-201ENST00000504287 SP7Q8TDD2 431 aaPredicted RBP17.85■□□□□ 0.45
LINC02488-201ENST00000504287 PHF12Q96QT6 1004 aa17.8■□□□□ 0.44
LINC02488-201ENST00000504287 CIZ1Q9ULV3 898 aaPredicted RBP17.76■□□□□ 0.43
LINC02488-201ENST00000504287 CLCN6P51797 869 aa17.74■□□□□ 0.43
LINC02488-201ENST00000504287 KIF12Q96FN5 646 aa17.73■□□□□ 0.43
LINC02488-201ENST00000504287 GABBR2O75899 941 aa17.69■□□□□ 0.42
LINC02488-201ENST00000504287 CHRM1P11229 460 aaPredicted RBP17.69■□□□□ 0.42
LINC02488-201ENST00000504287 PYGBP11216 843 aa17.67■□□□□ 0.42
LINC02488-201ENST00000504287 PKD2Q13563 968 aa17.67■□□□□ 0.42
LINC02488-201ENST00000504287 TRIM41Q8WV44 630 aa17.66■□□□□ 0.42
LINC02488-201ENST00000504287 MAP3K13O43283 966 aa17.65■□□□□ 0.42
LINC02488-201ENST00000504287 SGIP1Q9BQI5 828 aa17.63■□□□□ 0.41
LINC02488-201ENST00000504287 GALR2O43603 387 aaPredicted RBP17.6■□□□□ 0.41
LINC02488-201ENST00000504287 MS4A3Q96HJ5 214 aa17.6■□□□□ 0.41
LINC02488-201ENST00000504287 PCDHB13Q9Y5F0 798 aa17.57■□□□□ 0.4
LINC02488-201ENST00000504287 IFNL1Q8IU54 200 aa17.52■□□□□ 0.4
LINC02488-201ENST00000504287 ECM2O94769 699 aaPredicted RBP17.5■□□□□ 0.39
LINC02488-201ENST00000504287 AMER1Q5JTC6 1135 aaPredicted RBP17.48■□□□□ 0.39
LINC02488-201ENST00000504287 RNF25Q96BH1 459 aaPredicted RBP17.47■□□□□ 0.39
LINC02488-201ENST00000504287 ZNF467Q7Z7K2 595 aaPredicted RBP17.46■□□□□ 0.39
LINC02488-201ENST00000504287 PCDHB8Q9UN66 801 aa17.45■□□□□ 0.38
LINC02488-201ENST00000504287 RTN4Q9NQC3 1192 aaKnown RBP17.44■□□□□ 0.38
LINC02488-201ENST00000504287 TRPC6Q9Y210 931 aa17.44■□□□□ 0.38
LINC02488-201ENST00000504287 RGL2O15211 777 aa17.38■□□□□ 0.37
LINC02488-201ENST00000504287 RIOK3O14730 519 aaKnown RBP17.37■□□□□ 0.37
LINC02488-201ENST00000504287 POTEIP0CG38 1075 aa17.37■□□□□ 0.37
LINC02488-201ENST00000504287 TIE1P35590 1138 aa17.37■□□□□ 0.37
LINC02488-201ENST00000504287 DCBLD2Q96PD2 775 aa17.34■□□□□ 0.37
LINC02488-201ENST00000504287 BMP2KQ9NSY1 1161 aaPredicted RBP17.34■□□□□ 0.37
LINC02488-201ENST00000504287 ASTLQ6HA08 431 aaPredicted RBP17.33■□□□□ 0.36
LINC02488-201ENST00000504287 ATMINO43313 823 aaPredicted RBP17.3■□□□□ 0.36
LINC02488-201ENST00000504287 PDAP1Q13442 181 aaKnown RBP17.3■□□□□ 0.36
LINC02488-201ENST00000504287 TTLL13PA6NNM8 815 aa17.29■□□□□ 0.36
LINC02488-201ENST00000504287 VGFO15240 615 aaPredicted RBP17.27■□□□□ 0.36
LINC02488-201ENST00000504287 PSEN1P49768 467 aa17.27■□□□□ 0.36
LINC02488-201ENST00000504287 TMEM106CQ9BVX2 250 aa17.25■□□□□ 0.35
LINC02488-201ENST00000504287 ATN1P54259 1190 aaPredicted RBP17.24■□□□□ 0.35
LINC02488-201ENST00000504287 PELP1Q8IZL8 1130 aaKnown RBP17.21■□□□□ 0.35
LINC02488-201ENST00000504287 TAOK2Q9UL54 1235 aa17.2■□□□□ 0.34
LINC02488-201ENST00000504287 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.18■□□□□ 0.34
LINC02488-201ENST00000504287 ZFP91Q96JP5 570 aaPredicted RBP17.18■□□□□ 0.34
LINC02488-201ENST00000504287 TRIM35Q9UPQ4 493 aa17.16■□□□□ 0.34
LINC02488-201ENST00000504287 SLC39A7Q92504 469 aa17.06■□□□□ 0.32
LINC02488-201ENST00000504287 BCL11BQ9C0K0 894 aaPredicted RBP17.06■□□□□ 0.32
LINC02488-201ENST00000504287 STK25O00506 426 aa17.05■□□□□ 0.32
LINC02488-201ENST00000504287 IER5LQ5T953 404 aa17.05■□□□□ 0.32
LINC02488-201ENST00000504287 C7P10643 843 aa17.04■□□□□ 0.32
LINC02488-201ENST00000504287 HS6ST3Q8IZP7 471 aa17.04■□□□□ 0.32
LINC02488-201ENST00000504287 CABP2Q9NPB3 220 aa17.04■□□□□ 0.32
LINC02488-201ENST00000504287 METRNQ9UJH8 293 aa17.01■□□□□ 0.31
LINC02488-201ENST00000504287 STK24Q9Y6E0 443 aa17.01■□□□□ 0.31
LINC02488-201ENST00000504287 CHGAP10645 457 aaKnown RBP16.98■□□□□ 0.31
LINC02488-201ENST00000504287 GOLGA2Q08379 1002 aa16.98■□□□□ 0.31
LINC02488-201ENST00000504287 IRX5P78411 483 aaPredicted RBP16.96■□□□□ 0.31
LINC02488-201ENST00000504287 MKRN3Q13064 507 aaKnown RBP16.96■□□□□ 0.31
LINC02488-201ENST00000504287 EFCAB3Q8N7B9 438 aa16.96■□□□□ 0.31
LINC02488-201ENST00000504287 POTEFA5A3E0 1075 aa16.95■□□□□ 0.3
LINC02488-201ENST00000504287 DCAF8L2P0C7V8 631 aa16.95■□□□□ 0.3
LINC02488-201ENST00000504287 ILDR1Q86SU0 546 aaPredicted RBP16.94■□□□□ 0.3
LINC02488-201ENST00000504287 DNAJC5Q9H3Z4 198 aa16.94■□□□□ 0.3
LINC02488-201ENST00000504287 COLQQ9Y215 455 aaPredicted RBP16.92■□□□□ 0.3
LINC02488-201ENST00000504287 SOX12O15370 315 aa16.88■□□□□ 0.29
LINC02488-201ENST00000504287 OCEL1Q9H607 264 aa16.87■□□□□ 0.29
LINC02488-201ENST00000504287 PDCD7Q8N8D1 485 aaKnown RBP16.86■□□□□ 0.29
LINC02488-201ENST00000504287 SEC24BO95487 1268 aa16.85■□□□□ 0.29
LINC02488-201ENST00000504287 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.85■□□□□ 0.29
LINC02488-201ENST00000504287 PLCG2P16885 1265 aa16.83■□□□□ 0.28
LINC02488-201ENST00000504287 MFRPQ9BY79 579 aa16.82■□□□□ 0.28
LINC02488-201ENST00000504287 POTEB2H3BUK9 544 aa16.81■□□□□ 0.28
LINC02488-201ENST00000504287 NKX1-1Q15270 411 aaPredicted RBP16.81■□□□□ 0.28
LINC02488-201ENST00000504287 FBXO22Q8NEZ5 403 aa16.8■□□□□ 0.28
LINC02488-201ENST00000504287 PHF8Q9UPP1 1060 aa16.8■□□□□ 0.28
LINC02488-201ENST00000504287 MS4A4AQ96JQ5 239 aa16.78■□□□□ 0.28
LINC02488-201ENST00000504287 NLRP6P59044 892 aa16.76■□□□□ 0.27
LINC02488-201ENST00000504287 POTEJP0CG39 1038 aa16.74■□□□□ 0.27
LINC02488-201ENST00000504287 LHX8Q68G74 356 aa16.73■□□□□ 0.27
LINC02488-201ENST00000504287 DPY19L2Q6NUT2 758 aa16.71■□□□□ 0.27
LINC02488-201ENST00000504287 BBXQ8WY36 941 aaPredicted RBP16.71■□□□□ 0.27
LINC02488-201ENST00000504287 GTPBP6O43824 516 aaPredicted RBP16.63■□□□□ 0.25
LINC02488-201ENST00000504287 L3MBTL3Q96JM7 780 aaPredicted RBP16.62■□□□□ 0.25
LINC02488-201ENST00000504287 RYDENQ9NUL5 291 aaKnown RBP16.61■□□□□ 0.25
LINC02488-201ENST00000504287 TMEM121BQ9BXQ6 578 aaPredicted RBP16.59■□□□□ 0.25
LINC02488-201ENST00000504287 BOLA1Q9Y3E2 137 aa16.58■□□□□ 0.24
LINC02488-201ENST00000504287 PPP1R37O75864 691 aa16.57■□□□□ 0.24
LINC02488-201ENST00000504287 OTUD5Q96G74 571 aa16.56■□□□□ 0.24
LINC02488-201ENST00000504287 MAMSTRQ6ZN01 415 aa16.55■□□□□ 0.24
LINC02488-201ENST00000504287 MICALL2Q8IY33 904 aa16.53■□□□□ 0.24
LINC02488-201ENST00000504287 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.52■□□□□ 0.24
LINC02488-201ENST00000504287 SCUBE2Q9NQ36 999 aa16.5■□□□□ 0.23
LINC02488-201ENST00000504287 G3V3G9 751 aa16.47■□□□□ 0.23
LINC02488-201ENST00000504287 SPRYD3Q8NCJ5 442 aa16.45■□□□□ 0.22
LINC02488-201ENST00000504287 C3orf67Q6ZVT6 689 aa16.44■□□□□ 0.22
LINC02488-201ENST00000504287 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.43■□□□□ 0.22
LINC02488-201ENST00000504287 PAXIP1Q6ZW49 1069 aaPredicted RBP16.4■□□□□ 0.22
LINC02488-201ENST00000504287 TMEM92Q6UXU6 159 aa16.35■□□□□ 0.21
LINC02488-201ENST00000504287 CFAP44Q96MT7 982 aa16.35■□□□□ 0.21
LINC02488-201ENST00000504287 SLAIN1Q8ND83 568 aa16.34■□□□□ 0.21
LINC02488-201ENST00000504287 KIF3CO14782 793 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms