RNA–Protein interactions for RNA: ENST00000503678.5

SMN2-204, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-204ENST00000503678 ASTLQ6HA08 431 aaPredicted RBP11.44□□□□□ -0.58
SMN2-204ENST00000503678 SLC39A7Q92504 469 aa11.42□□□□□ -0.58
SMN2-204ENST00000503678 METRNQ9UJH8 293 aa11.41□□□□□ -0.58
SMN2-204ENST00000503678 ATMINO43313 823 aaPredicted RBP11.4□□□□□ -0.58
SMN2-204ENST00000503678 MAMSTRQ6ZN01 415 aa11.4□□□□□ -0.58
SMN2-204ENST00000503678 MS4A3Q96HJ5 214 aa11.39□□□□□ -0.59
SMN2-204ENST00000503678 POTEJP0CG39 1038 aa11.37□□□□□ -0.59
SMN2-204ENST00000503678 AMER1Q5JTC6 1135 aaPredicted RBP11.31□□□□□ -0.6
SMN2-204ENST00000503678 FAM163AQ96GL9 167 aaPredicted RBP11.27□□□□□ -0.61
SMN2-204ENST00000503678 SCUBE2Q9NQ36 999 aa11.27□□□□□ -0.61
SMN2-204ENST00000503678 ATN1P54259 1190 aaPredicted RBP11.26□□□□□ -0.61
SMN2-204ENST00000503678 TSPYL2Q9H2G4 693 aaPredicted RBP11.26□□□□□ -0.61
SMN2-204ENST00000503678 LCE2DQ5TA82 110 aaPredicted RBP11.25□□□□□ -0.61
SMN2-204ENST00000503678 CCDC61Q9Y6R9 512 aa11.25□□□□□ -0.61
SMN2-204ENST00000503678 RTN4Q9NQC3 1192 aaKnown RBP11.24□□□□□ -0.61
SMN2-204ENST00000503678 KIF12Q96FN5 646 aa11.23□□□□□ -0.61
SMN2-204ENST00000503678 SLC24A1O60721 1099 aa11.19□□□□□ -0.62
SMN2-204ENST00000503678 POTEFA5A3E0 1075 aa11.18□□□□□ -0.62
SMN2-204ENST00000503678 FKBP8Q14318 412 aa11.17□□□□□ -0.62
SMN2-204ENST00000503678 BMP2KQ9NSY1 1161 aaPredicted RBP11.17□□□□□ -0.62
SMN2-204ENST00000503678 PROM2Q8N271 834 aa11.16□□□□□ -0.62
SMN2-204ENST00000503678 TIE1P35590 1138 aa11.15□□□□□ -0.62
SMN2-204ENST00000503678 MAP3K13O43283 966 aa11.12□□□□□ -0.63
SMN2-204ENST00000503678 TRPC6Q9Y210 931 aa11.11□□□□□ -0.63
SMN2-204ENST00000503678 SEC24BO95487 1268 aa11.08□□□□□ -0.64
SMN2-204ENST00000503678 PLEKHG5O94827 1062 aa11.07□□□□□ -0.64
SMN2-204ENST00000503678 COLQQ9Y215 455 aaPredicted RBP11.07□□□□□ -0.64
SMN2-204ENST00000503678 TTLL13PA6NNM8 815 aa11.05□□□□□ -0.64
SMN2-204ENST00000503678 CDAN1Q8IWY9 1227 aa11.04□□□□□ -0.64
SMN2-204ENST00000503678 RASEFQ8IZ41 740 aa11.04□□□□□ -0.64
SMN2-204ENST00000503678 MIER1Q8N108 512 aa11.04□□□□□ -0.64
SMN2-204ENST00000503678 IER5LQ5T953 404 aa11.02□□□□□ -0.65
SMN2-204ENST00000503678 SGIP1Q9BQI5 828 aa11.02□□□□□ -0.65
SMN2-204ENST00000503678 TRIM35Q9UPQ4 493 aa10.98□□□□□ -0.65
SMN2-204ENST00000503678 PCDHB13Q9Y5F0 798 aa10.94□□□□□ -0.66
SMN2-204ENST00000503678 ST18O60284 1047 aa10.93□□□□□ -0.66
SMN2-204ENST00000503678 SLAIN1Q8ND83 568 aa10.93□□□□□ -0.66
SMN2-204ENST00000503678 IFNL1Q8IU54 200 aa10.87□□□□□ -0.67
SMN2-204ENST00000503678 PLCD3Q8N3E9 789 aa10.87□□□□□ -0.67
SMN2-204ENST00000503678 NUBP1P53384 320 aa10.86□□□□□ -0.67
SMN2-204ENST00000503678 ZBTB47Q9UFB7 747 aaPredicted RBP10.86□□□□□ -0.67
SMN2-204ENST00000503678 PLCG2P16885 1265 aa10.85□□□□□ -0.67
SMN2-204ENST00000503678 TMEM106CQ9BVX2 250 aa10.85□□□□□ -0.67
SMN2-204ENST00000503678 IRX5P78411 483 aaPredicted RBP10.82□□□□□ -0.68
SMN2-204ENST00000503678 TMEM121BQ9BXQ6 578 aaPredicted RBP10.81□□□□□ -0.68
SMN2-204ENST00000503678 MMRN1Q13201 1228 aa10.79□□□□□ -0.68
SMN2-204ENST00000503678 SNPHO15079 494 aa10.78□□□□□ -0.68
SMN2-204ENST00000503678 SPNS2Q8IVW8 549 aa10.78□□□□□ -0.68
SMN2-204ENST00000503678 FAM212AQ96EL1 285 aa10.78□□□□□ -0.68
SMN2-204ENST00000503678 OCEL1Q9H607 264 aa10.78□□□□□ -0.68
SMN2-204ENST00000503678 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.72□□□□□ -0.69
SMN2-204ENST00000503678 MARVELD3Q96A59 401 aa10.67□□□□□ -0.7
SMN2-204ENST00000503678 DCAF8Q5TAQ9 597 aa10.65□□□□□ -0.7
SMN2-204ENST00000503678 FBXO3Q9UK99 471 aa10.65□□□□□ -0.7
SMN2-204ENST00000503678 PYGBP11216 843 aa10.62□□□□□ -0.71
SMN2-204ENST00000503678 PCDHB8Q9UN66 801 aa10.61□□□□□ -0.71
SMN2-204ENST00000503678 L3MBTL3Q96JM7 780 aaPredicted RBP10.58□□□□□ -0.72
SMN2-204ENST00000503678 EMP3P54852 163 aa10.56□□□□□ -0.72
SMN2-204ENST00000503678 C3orf67Q6ZVT6 689 aa10.56□□□□□ -0.72
SMN2-204ENST00000503678 PDCD7Q8N8D1 485 aaKnown RBP10.56□□□□□ -0.72
SMN2-204ENST00000503678 MKRN3Q13064 507 aaKnown RBP10.53□□□□□ -0.72
SMN2-204ENST00000503678 POTEB3A0JP26 581 aa10.51□□□□□ -0.73
SMN2-204ENST00000503678 GOLGA2Q08379 1002 aa10.51□□□□□ -0.73
SMN2-204ENST00000503678 POTEBQ6S5H4 581 aa10.51□□□□□ -0.73
SMN2-204ENST00000503678 HS3ST6Q96QI5 342 aa10.51□□□□□ -0.73
SMN2-204ENST00000503678 KRTAP3-3Q9BYR6 98 aa10.51□□□□□ -0.73
SMN2-204ENST00000503678 KRTAP3-2Q9BYR7 98 aa10.51□□□□□ -0.73
SMN2-204ENST00000503678 ZNF467Q7Z7K2 595 aaPredicted RBP10.5□□□□□ -0.73
SMN2-204ENST00000503678 FAM205CA6NFA0 338 aa10.49□□□□□ -0.73
SMN2-204ENST00000503678 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMN2-204ENST00000503678 CHRM1P11229 460 aaPredicted RBP10.46□□□□□ -0.73
SMN2-204ENST00000503678 VASPP50552 380 aaPredicted RBP10.46□□□□□ -0.73
SMN2-204ENST00000503678 GSE1Q14687 1217 aa10.46□□□□□ -0.73
SMN2-204ENST00000503678 ILDR1Q86SU0 546 aaPredicted RBP10.43□□□□□ -0.74
SMN2-204ENST00000503678 KLHL34Q8N239 644 aa10.43□□□□□ -0.74
SMN2-204ENST00000503678 PSEN1P49768 467 aa10.41□□□□□ -0.74
SMN2-204ENST00000503678 PLCB2Q00722 1185 aa10.4□□□□□ -0.74
SMN2-204ENST00000503678 HOXB3P14651 431 aaPredicted RBP10.36□□□□□ -0.75
SMN2-204ENST00000503678 DPY19L2Q6NUT2 758 aa10.36□□□□□ -0.75
SMN2-204ENST00000503678 HOXB1P14653 301 aaPredicted RBP10.35□□□□□ -0.75
SMN2-204ENST00000503678 IFNLR1Q8IU57 520 aaPredicted RBP10.35□□□□□ -0.75
SMN2-204ENST00000503678 BOLA1Q9Y3E2 137 aa10.34□□□□□ -0.75
SMN2-204ENST00000503678 G3V3G9 751 aa10.33□□□□□ -0.76
SMN2-204ENST00000503678 PDAP1Q13442 181 aaKnown RBP10.33□□□□□ -0.76
SMN2-204ENST00000503678 ZNF710Q8N1W2 664 aa10.31□□□□□ -0.76
SMN2-204ENST00000503678 ERBB3P21860 1342 aa10.3□□□□□ -0.76
SMN2-204ENST00000503678 DOK7Q18PE1 504 aa10.29□□□□□ -0.76
SMN2-204ENST00000503678 CABP2Q9NPB3 220 aa10.27□□□□□ -0.77
SMN2-204ENST00000503678 DCAF8L2P0C7V8 631 aa10.26□□□□□ -0.77
SMN2-204ENST00000503678 RNF166Q96A37 237 aaPredicted RBP10.26□□□□□ -0.77
SMN2-204ENST00000503678 PKD2Q13563 968 aa10.24□□□□□ -0.77
SMN2-204ENST00000503678 RIMBP2O15034 1052 aa10.22□□□□□ -0.77
SMN2-204ENST00000503678 HAP1P54257 671 aaPredicted RBP10.22□□□□□ -0.77
SMN2-204ENST00000503678 SPOCK2Q92563 424 aa10.22□□□□□ -0.77
SMN2-204ENST00000503678 MYT1LQ9UL68 1186 aa10.21□□□□□ -0.77
SMN2-204ENST00000503678 VARS2Q5ST30 1063 aaKnown RBP10.2□□□□□ -0.78
SMN2-204ENST00000503678 ZNF687Q8N1G0 1237 aa10.18□□□□□ -0.78
SMN2-204ENST00000503678 ZSWIM6Q9HCJ5 1215 aa10.18□□□□□ -0.78
SMN2-204ENST00000503678 CIZ1Q9ULV3 898 aaPredicted RBP10.18□□□□□ -0.78
SMN2-204ENST00000503678 PTGER2P43116 358 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms