RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 SP7Q8TDD2 431 aaPredicted RBP11.45□□□□□ -0.58
SCLT1-206ENST00000503565 ZNF579Q8NAF0 562 aaKnown RBP11.44□□□□□ -0.58
SCLT1-206ENST00000503565 PHF12Q96QT6 1004 aa11.43□□□□□ -0.58
SCLT1-206ENST00000503565 DCAF8Q5TAQ9 597 aa11.39□□□□□ -0.59
SCLT1-206ENST00000503565 GABBR2O75899 941 aa11.38□□□□□ -0.59
SCLT1-206ENST00000503565 PAK3O75914 559 aaPredicted RBP11.38□□□□□ -0.59
SCLT1-206ENST00000503565 FAM212AQ96EL1 285 aa11.38□□□□□ -0.59
SCLT1-206ENST00000503565 KIF12Q96FN5 646 aa11.35□□□□□ -0.59
SCLT1-206ENST00000503565 MAP3K13O43283 966 aa11.31□□□□□ -0.6
SCLT1-206ENST00000503565 GALR2O43603 387 aaPredicted RBP11.31□□□□□ -0.6
SCLT1-206ENST00000503565 GSE1Q14687 1217 aa11.31□□□□□ -0.6
SCLT1-206ENST00000503565 CIZ1Q9ULV3 898 aaPredicted RBP11.31□□□□□ -0.6
SCLT1-206ENST00000503565 PYGBP11216 843 aa11.3□□□□□ -0.6
SCLT1-206ENST00000503565 MS4A3Q96HJ5 214 aa11.28□□□□□ -0.6
SCLT1-206ENST00000503565 PKD2Q13563 968 aa11.27□□□□□ -0.61
SCLT1-206ENST00000503565 CHRM1P11229 460 aaPredicted RBP11.25□□□□□ -0.61
SCLT1-206ENST00000503565 TRPC6Q9Y210 931 aa11.25□□□□□ -0.61
SCLT1-206ENST00000503565 CLCN6P51797 869 aa11.23□□□□□ -0.61
SCLT1-206ENST00000503565 POTEIP0CG38 1075 aa11.22□□□□□ -0.61
SCLT1-206ENST00000503565 IFNL1Q8IU54 200 aa11.22□□□□□ -0.61
SCLT1-206ENST00000503565 SGIP1Q9BQI5 828 aa11.2□□□□□ -0.62
SCLT1-206ENST00000503565 PCDHB13Q9Y5F0 798 aa11.2□□□□□ -0.62
SCLT1-206ENST00000503565 PCDHB8Q9UN66 801 aa11.19□□□□□ -0.62
SCLT1-206ENST00000503565 RNF25Q96BH1 459 aaPredicted RBP11.18□□□□□ -0.62
SCLT1-206ENST00000503565 TRIM41Q8WV44 630 aa11.13□□□□□ -0.63
SCLT1-206ENST00000503565 PLCB2Q00722 1185 aa11.12□□□□□ -0.63
SCLT1-206ENST00000503565 ECM2O94769 699 aaPredicted RBP11.11□□□□□ -0.63
SCLT1-206ENST00000503565 PELP1Q8IZL8 1130 aaKnown RBP11.11□□□□□ -0.63
SCLT1-206ENST00000503565 BMP2KQ9NSY1 1161 aaPredicted RBP11.11□□□□□ -0.63
SCLT1-206ENST00000503565 RGL2O15211 777 aa11.09□□□□□ -0.63
SCLT1-206ENST00000503565 ATMINO43313 823 aaPredicted RBP11.09□□□□□ -0.63
SCLT1-206ENST00000503565 ASTLQ6HA08 431 aaPredicted RBP11.09□□□□□ -0.63
SCLT1-206ENST00000503565 ZNF467Q7Z7K2 595 aaPredicted RBP11.08□□□□□ -0.64
SCLT1-206ENST00000503565 TIE1P35590 1138 aa11.07□□□□□ -0.64
SCLT1-206ENST00000503565 DCBLD2Q96PD2 775 aa11.07□□□□□ -0.64
SCLT1-206ENST00000503565 TTLL13PA6NNM8 815 aa11.06□□□□□ -0.64
SCLT1-206ENST00000503565 ATN1P54259 1190 aaPredicted RBP11.06□□□□□ -0.64
SCLT1-206ENST00000503565 RIOK3O14730 519 aaKnown RBP11.03□□□□□ -0.64
SCLT1-206ENST00000503565 PSEN1P49768 467 aa11.02□□□□□ -0.65
SCLT1-206ENST00000503565 TMEM106CQ9BVX2 250 aa11.02□□□□□ -0.65
SCLT1-206ENST00000503565 PDAP1Q13442 181 aaKnown RBP11□□□□□ -0.65
SCLT1-206ENST00000503565 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.97□□□□□ -0.65
SCLT1-206ENST00000503565 ZFP91Q96JP5 570 aaPredicted RBP10.97□□□□□ -0.65
SCLT1-206ENST00000503565 TRIM35Q9UPQ4 493 aa10.96□□□□□ -0.65
SCLT1-206ENST00000503565 VGFO15240 615 aaPredicted RBP10.95□□□□□ -0.66
SCLT1-206ENST00000503565 POTEFA5A3E0 1075 aa10.94□□□□□ -0.66
SCLT1-206ENST00000503565 DCAF8L2P0C7V8 631 aa10.94□□□□□ -0.66
SCLT1-206ENST00000503565 HAP1P54257 671 aaPredicted RBP10.94□□□□□ -0.66
SCLT1-206ENST00000503565 COLQQ9Y215 455 aaPredicted RBP10.89□□□□□ -0.67
SCLT1-206ENST00000503565 SLC39A7Q92504 469 aa10.88□□□□□ -0.67
SCLT1-206ENST00000503565 CABP2Q9NPB3 220 aa10.88□□□□□ -0.67
SCLT1-206ENST00000503565 METRNQ9UJH8 293 aa10.88□□□□□ -0.67
SCLT1-206ENST00000503565 POTEB2H3BUK9 544 aa10.87□□□□□ -0.67
SCLT1-206ENST00000503565 C7P10643 843 aa10.87□□□□□ -0.67
SCLT1-206ENST00000503565 BCL11BQ9C0K0 894 aaPredicted RBP10.87□□□□□ -0.67
SCLT1-206ENST00000503565 IRX5P78411 483 aaPredicted RBP10.85□□□□□ -0.67
SCLT1-206ENST00000503565 IER5LQ5T953 404 aa10.84□□□□□ -0.67
SCLT1-206ENST00000503565 EFCAB3Q8N7B9 438 aa10.84□□□□□ -0.67
SCLT1-206ENST00000503565 STK25O00506 426 aa10.83□□□□□ -0.68
SCLT1-206ENST00000503565 POTEJP0CG39 1038 aa10.83□□□□□ -0.68
SCLT1-206ENST00000503565 ILDR1Q86SU0 546 aaPredicted RBP10.83□□□□□ -0.68
SCLT1-206ENST00000503565 STK24Q9Y6E0 443 aa10.82□□□□□ -0.68
SCLT1-206ENST00000503565 HS6ST3Q8IZP7 471 aa10.81□□□□□ -0.68
SCLT1-206ENST00000503565 PDCD7Q8N8D1 485 aaKnown RBP10.8□□□□□ -0.68
SCLT1-206ENST00000503565 TAOK2Q9UL54 1235 aa10.8□□□□□ -0.68
SCLT1-206ENST00000503565 CHGAP10645 457 aaKnown RBP10.79□□□□□ -0.68
SCLT1-206ENST00000503565 VSIG10Q8N0Z9 540 aa10.78□□□□□ -0.68
SCLT1-206ENST00000503565 MKRN3Q13064 507 aaKnown RBP10.77□□□□□ -0.69
SCLT1-206ENST00000503565 GOLGA2Q08379 1002 aa10.76□□□□□ -0.69
SCLT1-206ENST00000503565 BCANQ96GW7 911 aa10.76□□□□□ -0.69
SCLT1-206ENST00000503565 OCEL1Q9H607 264 aa10.76□□□□□ -0.69
SCLT1-206ENST00000503565 NKX1-1Q15270 411 aaPredicted RBP10.75□□□□□ -0.69
SCLT1-206ENST00000503565 LHX8Q68G74 356 aa10.75□□□□□ -0.69
SCLT1-206ENST00000503565 DPY19L2Q6NUT2 758 aa10.75□□□□□ -0.69
SCLT1-206ENST00000503565 MS4A4AQ96JQ5 239 aa10.75□□□□□ -0.69
SCLT1-206ENST00000503565 SEC24BO95487 1268 aa10.74□□□□□ -0.69
SCLT1-206ENST00000503565 MFRPQ9BY79 579 aa10.74□□□□□ -0.69
SCLT1-206ENST00000503565 DNAJC5Q9H3Z4 198 aa10.74□□□□□ -0.69
SCLT1-206ENST00000503565 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.74□□□□□ -0.69
SCLT1-206ENST00000503565 PHF8Q9UPP1 1060 aa10.74□□□□□ -0.69
SCLT1-206ENST00000503565 FBXO22Q8NEZ5 403 aa10.73□□□□□ -0.69
SCLT1-206ENST00000503565 SOX12O15370 315 aa10.72□□□□□ -0.69
SCLT1-206ENST00000503565 BBXQ8WY36 941 aaPredicted RBP10.72□□□□□ -0.69
SCLT1-206ENST00000503565 PRKCSHP14314 528 aaPredicted RBP10.71□□□□□ -0.69
SCLT1-206ENST00000503565 PLCG2P16885 1265 aa10.71□□□□□ -0.69
SCLT1-206ENST00000503565 KDM2AQ9Y2K7 1162 aa10.7□□□□□ -0.7
SCLT1-206ENST00000503565 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.68□□□□□ -0.7
SCLT1-206ENST00000503565 OTUD5Q96G74 571 aa10.67□□□□□ -0.7
SCLT1-206ENST00000503565 PAXIP1Q6ZW49 1069 aaPredicted RBP10.65□□□□□ -0.7
SCLT1-206ENST00000503565 NLRP6P59044 892 aa10.64□□□□□ -0.71
SCLT1-206ENST00000503565 PPP1R37O75864 691 aa10.63□□□□□ -0.71
SCLT1-206ENST00000503565 CFAP44Q96MT7 982 aa10.62□□□□□ -0.71
SCLT1-206ENST00000503565 GTPBP6O43824 516 aaPredicted RBP10.6□□□□□ -0.71
SCLT1-206ENST00000503565 TMEM121BQ9BXQ6 578 aaPredicted RBP10.6□□□□□ -0.71
SCLT1-206ENST00000503565 BOLA1Q9Y3E2 137 aa10.57□□□□□ -0.72
SCLT1-206ENST00000503565 L3MBTL3Q96JM7 780 aaPredicted RBP10.56□□□□□ -0.72
SCLT1-206ENST00000503565 MICALL2Q8IY33 904 aa10.55□□□□□ -0.72
SCLT1-206ENST00000503565 TSHZ2Q9NRE2 1034 aa10.54□□□□□ -0.72
SCLT1-206ENST00000503565 SPRYD3Q8NCJ5 442 aa10.53□□□□□ -0.72
SCLT1-206ENST00000503565 TMEM92Q6UXU6 159 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms