RNA–Protein interactions for RNA: ENST00000503255.5

GYPB-203, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-203ENST00000503255 CCDC61Q9Y6R9 512 aa13.19□□□□□ -0.3
GYPB-203ENST00000503255 PELP1Q8IZL8 1130 aaKnown RBP13.18□□□□□ -0.3
GYPB-203ENST00000503255 KIF12Q96FN5 646 aa13.12□□□□□ -0.31
GYPB-203ENST00000503255 POTEB2H3BUK9 544 aa13.1□□□□□ -0.31
GYPB-203ENST00000503255 MAP3K13O43283 966 aa13.09□□□□□ -0.31
GYPB-203ENST00000503255 TRPC6Q9Y210 931 aa13.09□□□□□ -0.31
GYPB-203ENST00000503255 ATMINO43313 823 aaPredicted RBP13.07□□□□□ -0.32
GYPB-203ENST00000503255 NUBP1P53384 320 aa13.07□□□□□ -0.32
GYPB-203ENST00000503255 ASTLQ6HA08 431 aaPredicted RBP13.05□□□□□ -0.32
GYPB-203ENST00000503255 ATN1P54259 1190 aaPredicted RBP13.01□□□□□ -0.33
GYPB-203ENST00000503255 ZBTB47Q9UFB7 747 aaPredicted RBP12.99□□□□□ -0.33
GYPB-203ENST00000503255 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
GYPB-203ENST00000503255 METRNQ9UJH8 293 aa12.98□□□□□ -0.33
GYPB-203ENST00000503255 BMP2KQ9NSY1 1161 aaPredicted RBP12.97□□□□□ -0.33
GYPB-203ENST00000503255 FBXO3Q9UK99 471 aa12.96□□□□□ -0.33
GYPB-203ENST00000503255 POTEJP0CG39 1038 aa12.92□□□□□ -0.34
GYPB-203ENST00000503255 C7P10643 843 aa12.92□□□□□ -0.34
GYPB-203ENST00000503255 SLC39A7Q92504 469 aa12.92□□□□□ -0.34
GYPB-203ENST00000503255 PCDHB13Q9Y5F0 798 aa12.92□□□□□ -0.34
GYPB-203ENST00000503255 DCAF8Q5TAQ9 597 aa12.91□□□□□ -0.34
GYPB-203ENST00000503255 FAM212AQ96EL1 285 aa12.9□□□□□ -0.34
GYPB-203ENST00000503255 VASPP50552 380 aaPredicted RBP12.88□□□□□ -0.35
GYPB-203ENST00000503255 IFNL1Q8IU54 200 aa12.88□□□□□ -0.35
GYPB-203ENST00000503255 POTEFA5A3E0 1075 aa12.87□□□□□ -0.35
GYPB-203ENST00000503255 TTLL13PA6NNM8 815 aa12.87□□□□□ -0.35
GYPB-203ENST00000503255 KLHL34Q8N239 644 aa12.87□□□□□ -0.35
GYPB-203ENST00000503255 TIE1P35590 1138 aa12.86□□□□□ -0.35
GYPB-203ENST00000503255 PYGBP11216 843 aa12.85□□□□□ -0.35
GYPB-203ENST00000503255 SGIP1Q9BQI5 828 aa12.81□□□□□ -0.36
GYPB-203ENST00000503255 COLQQ9Y215 455 aaPredicted RBP12.8□□□□□ -0.36
GYPB-203ENST00000503255 TRIM35Q9UPQ4 493 aa12.79□□□□□ -0.36
GYPB-203ENST00000503255 TMEM106CQ9BVX2 250 aa12.77□□□□□ -0.37
GYPB-203ENST00000503255 PCDHB8Q9UN66 801 aa12.77□□□□□ -0.37
GYPB-203ENST00000503255 SEC24BO95487 1268 aa12.74□□□□□ -0.37
GYPB-203ENST00000503255 IFNLR1Q8IU57 520 aaPredicted RBP12.72□□□□□ -0.37
GYPB-203ENST00000503255 MAMSTRQ6ZN01 415 aa12.67□□□□□ -0.38
GYPB-203ENST00000503255 GSE1Q14687 1217 aa12.65□□□□□ -0.38
GYPB-203ENST00000503255 SCUBE2Q9NQ36 999 aa12.64□□□□□ -0.39
GYPB-203ENST00000503255 IER5LQ5T953 404 aa12.63□□□□□ -0.39
GYPB-203ENST00000503255 SPOCK2Q92563 424 aa12.6□□□□□ -0.39
GYPB-203ENST00000503255 CIZ1Q9ULV3 898 aaPredicted RBP12.6□□□□□ -0.39
GYPB-203ENST00000503255 FAM163AQ96GL9 167 aaPredicted RBP12.59□□□□□ -0.39
GYPB-203ENST00000503255 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
GYPB-203ENST00000503255 POTEMA6NI47 508 aa12.56□□□□□ -0.4
GYPB-203ENST00000503255 PLCG2P16885 1265 aa12.56□□□□□ -0.4
GYPB-203ENST00000503255 CHRM1P11229 460 aaPredicted RBP12.55□□□□□ -0.4
GYPB-203ENST00000503255 POTEGQ6S5H5 508 aa12.55□□□□□ -0.4
GYPB-203ENST00000503255 LCE2DQ5TA82 110 aaPredicted RBP12.54□□□□□ -0.4
GYPB-203ENST00000503255 ZNF467Q7Z7K2 595 aaPredicted RBP12.53□□□□□ -0.4
GYPB-203ENST00000503255 PSEN1P49768 467 aa12.5□□□□□ -0.41
GYPB-203ENST00000503255 OCEL1Q9H607 264 aa12.5□□□□□ -0.41
GYPB-203ENST00000503255 PLSCR2Q9NRY7 297 aa12.49□□□□□ -0.41
GYPB-203ENST00000503255 SLAIN1Q8ND83 568 aa12.47□□□□□ -0.41
GYPB-203ENST00000503255 GOLGA2Q08379 1002 aa12.43□□□□□ -0.42
GYPB-203ENST00000503255 MKRN3Q13064 507 aaKnown RBP12.42□□□□□ -0.42
GYPB-203ENST00000503255 PDCD7Q8N8D1 485 aaKnown RBP12.42□□□□□ -0.42
GYPB-203ENST00000503255 PDAP1Q13442 181 aaKnown RBP12.4□□□□□ -0.42
GYPB-203ENST00000503255 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.39□□□□□ -0.43
GYPB-203ENST00000503255 CABP2Q9NPB3 220 aa12.38□□□□□ -0.43
GYPB-203ENST00000503255 DPY19L2Q6NUT2 758 aa12.37□□□□□ -0.43
GYPB-203ENST00000503255 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.33□□□□□ -0.44
GYPB-203ENST00000503255 ST18O60284 1047 aa12.32□□□□□ -0.44
GYPB-203ENST00000503255 RNF25Q96BH1 459 aaPredicted RBP12.27□□□□□ -0.45
GYPB-203ENST00000503255 L3MBTL3Q96JM7 780 aaPredicted RBP12.27□□□□□ -0.45
GYPB-203ENST00000503255 ILDR1Q86SU0 546 aaPredicted RBP12.26□□□□□ -0.45
GYPB-203ENST00000503255 EFCAB3Q8N7B9 438 aa12.25□□□□□ -0.45
GYPB-203ENST00000503255 C3orf67Q6ZVT6 689 aa12.24□□□□□ -0.45
GYPB-203ENST00000503255 TRIM41Q8WV44 630 aa12.23□□□□□ -0.45
GYPB-203ENST00000503255 PCDH10Q9P2E7 1040 aa12.21□□□□□ -0.45
GYPB-203ENST00000503255 RIOK3O14730 519 aaKnown RBP12.19□□□□□ -0.46
GYPB-203ENST00000503255 CDAN1Q8IWY9 1227 aa12.19□□□□□ -0.46
GYPB-203ENST00000503255 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.18□□□□□ -0.46
GYPB-203ENST00000503255 MARVELD3Q96A59 401 aa12.18□□□□□ -0.46
GYPB-203ENST00000503255 ZFP91Q96JP5 570 aaPredicted RBP12.18□□□□□ -0.46
GYPB-203ENST00000503255 BOLA1Q9Y3E2 137 aa12.17□□□□□ -0.46
GYPB-203ENST00000503255 SNPHO15079 494 aa12.14□□□□□ -0.47
GYPB-203ENST00000503255 G3V3G9 751 aa12.12□□□□□ -0.47
GYPB-203ENST00000503255 VGFO15240 615 aaPredicted RBP12.1□□□□□ -0.47
GYPB-203ENST00000503255 PHF8Q9UPP1 1060 aa12.09□□□□□ -0.47
GYPB-203ENST00000503255 MS4A4AQ96JQ5 239 aa12.08□□□□□ -0.48
GYPB-203ENST00000503255 TMEM121BQ9BXQ6 578 aaPredicted RBP12.06□□□□□ -0.48
GYPB-203ENST00000503255 SOX12O15370 315 aa12.04□□□□□ -0.48
GYPB-203ENST00000503255 ECM2O94769 699 aaPredicted RBP12.04□□□□□ -0.48
GYPB-203ENST00000503255 BCL11BQ9C0K0 894 aaPredicted RBP12.03□□□□□ -0.48
GYPB-203ENST00000503255 POTEB3A0JP26 581 aa12.02□□□□□ -0.49
GYPB-203ENST00000503255 HOXB3P14651 431 aaPredicted RBP12.02□□□□□ -0.49
GYPB-203ENST00000503255 PKD2Q13563 968 aa12.02□□□□□ -0.49
GYPB-203ENST00000503255 POTEBQ6S5H4 581 aa12.02□□□□□ -0.49
GYPB-203ENST00000503255 TMEM92Q6UXU6 159 aa12.02□□□□□ -0.49
GYPB-203ENST00000503255 EMP3P54852 163 aa12.01□□□□□ -0.49
GYPB-203ENST00000503255 MICALL2Q8IY33 904 aa12.01□□□□□ -0.49
GYPB-203ENST00000503255 STK24Q9Y6E0 443 aa12.01□□□□□ -0.49
GYPB-203ENST00000503255 RGL2O15211 777 aa11.99□□□□□ -0.49
GYPB-203ENST00000503255 FAM205CA6NFA0 338 aa11.98□□□□□ -0.49
GYPB-203ENST00000503255 STK25O00506 426 aa11.96□□□□□ -0.49
GYPB-203ENST00000503255 FBXO22Q8NEZ5 403 aa11.94□□□□□ -0.5
GYPB-203ENST00000503255 HS3ST6Q96QI5 342 aa11.94□□□□□ -0.5
GYPB-203ENST00000503255 NLRP6P59044 892 aa11.92□□□□□ -0.5
GYPB-203ENST00000503255 ZNF710Q8N1W2 664 aa11.92□□□□□ -0.5
GYPB-203ENST00000503255 MFRPQ9BY79 579 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms