RNA–Protein interactions for RNA: ENST00000503248.1

PHF3-206, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 529 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-206ENST00000503248 FARP1Q9Y4F1 1045 aaPredicted RBP10.97□□□□□ -0.65
PHF3-206ENST00000503248 NUBP1P53384 320 aa10.96□□□□□ -0.65
PHF3-206ENST00000503248 CIZ1Q9ULV3 898 aaPredicted RBP10.94□□□□□ -0.66
PHF3-206ENST00000503248 PKD2Q13563 968 aa10.93□□□□□ -0.66
PHF3-206ENST00000503248 CHADLQ6NUI6 762 aa10.91□□□□□ -0.66
PHF3-206ENST00000503248 POTEGQ6S5H5 508 aa10.91□□□□□ -0.66
PHF3-206ENST00000503248 ECM2O94769 699 aaPredicted RBP10.9□□□□□ -0.66
PHF3-206ENST00000503248 DCAF8Q5TAQ9 597 aa10.9□□□□□ -0.66
PHF3-206ENST00000503248 PAK3O75914 559 aaPredicted RBP10.88□□□□□ -0.67
PHF3-206ENST00000503248 PCDH10Q9P2E7 1040 aa10.87□□□□□ -0.67
PHF3-206ENST00000503248 TAOK2Q9UL54 1235 aa10.86□□□□□ -0.67
PHF3-206ENST00000503248 DCBLD2Q96PD2 775 aa10.85□□□□□ -0.67
PHF3-206ENST00000503248 CHRM1P11229 460 aaPredicted RBP10.84□□□□□ -0.67
PHF3-206ENST00000503248 CLCN6P51797 869 aa10.83□□□□□ -0.68
PHF3-206ENST00000503248 RASEFQ8IZ41 740 aa10.83□□□□□ -0.68
PHF3-206ENST00000503248 OTUD5Q96G74 571 aa10.82□□□□□ -0.68
PHF3-206ENST00000503248 CD44P16070 742 aaKnown RBP10.78□□□□□ -0.68
PHF3-206ENST00000503248 DCAF8L2P0C7V8 631 aa10.75□□□□□ -0.69
PHF3-206ENST00000503248 TSPYL2Q9H2G4 693 aaPredicted RBP10.74□□□□□ -0.69
PHF3-206ENST00000503248 SGIP1Q9BQI5 828 aa10.72□□□□□ -0.69
PHF3-206ENST00000503248 RIOK3O14730 519 aaKnown RBP10.71□□□□□ -0.69
PHF3-206ENST00000503248 RGL2O15211 777 aa10.71□□□□□ -0.69
PHF3-206ENST00000503248 ZNF467Q7Z7K2 595 aaPredicted RBP10.71□□□□□ -0.69
PHF3-206ENST00000503248 CCDC61Q9Y6R9 512 aa10.71□□□□□ -0.69
PHF3-206ENST00000503248 VGFO15240 615 aaPredicted RBP10.68□□□□□ -0.7
PHF3-206ENST00000503248 PYGBP11216 843 aa10.67□□□□□ -0.7
PHF3-206ENST00000503248 ZRANB1Q9UGI0 708 aa10.66□□□□□ -0.7
PHF3-206ENST00000503248 POTEB2H3BUK9 544 aa10.63□□□□□ -0.71
PHF3-206ENST00000503248 ZNF579Q8NAF0 562 aaKnown RBP10.63□□□□□ -0.71
PHF3-206ENST00000503248 HS6ST3Q8IZP7 471 aa10.61□□□□□ -0.71
PHF3-206ENST00000503248 BBXQ8WY36 941 aaPredicted RBP10.61□□□□□ -0.71
PHF3-206ENST00000503248 RNF25Q96BH1 459 aaPredicted RBP10.61□□□□□ -0.71
PHF3-206ENST00000503248 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.61□□□□□ -0.71
PHF3-206ENST00000503248 KIF12Q96FN5 646 aa10.59□□□□□ -0.71
PHF3-206ENST00000503248 PDAP1Q13442 181 aaKnown RBP10.58□□□□□ -0.72
PHF3-206ENST00000503248 DNAJC5Q9H3Z4 198 aa10.58□□□□□ -0.72
PHF3-206ENST00000503248 PCDHB13Q9Y5F0 798 aa10.58□□□□□ -0.72
PHF3-206ENST00000503248 CHGAP10645 457 aaKnown RBP10.57□□□□□ -0.72
PHF3-206ENST00000503248 RYDENQ9NUL5 291 aaKnown RBP10.54□□□□□ -0.72
PHF3-206ENST00000503248 STK25O00506 426 aa10.53□□□□□ -0.72
PHF3-206ENST00000503248 MAP3K13O43283 966 aa10.53□□□□□ -0.72
PHF3-206ENST00000503248 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.5□□□□□ -0.73
PHF3-206ENST00000503248 PLCB2Q00722 1185 aa10.5□□□□□ -0.73
PHF3-206ENST00000503248 ZFP91Q96JP5 570 aaPredicted RBP10.5□□□□□ -0.73
PHF3-206ENST00000503248 PHF12Q96QT6 1004 aa10.5□□□□□ -0.73
PHF3-206ENST00000503248 SLC24A1O60721 1099 aa10.49□□□□□ -0.73
PHF3-206ENST00000503248 IFNL1Q8IU54 200 aa10.49□□□□□ -0.73
PHF3-206ENST00000503248 GALR2O43603 387 aaPredicted RBP10.48□□□□□ -0.73
PHF3-206ENST00000503248 PSEN1P49768 467 aa10.48□□□□□ -0.73
PHF3-206ENST00000503248 BCL11BQ9C0K0 894 aaPredicted RBP10.48□□□□□ -0.73
PHF3-206ENST00000503248 PCDHB8Q9UN66 801 aa10.48□□□□□ -0.73
PHF3-206ENST00000503248 FAM163AQ96GL9 167 aaPredicted RBP10.46□□□□□ -0.73
PHF3-206ENST00000503248 STK24Q9Y6E0 443 aa10.46□□□□□ -0.73
PHF3-206ENST00000503248 SPRYD3Q8NCJ5 442 aa10.45□□□□□ -0.74
PHF3-206ENST00000503248 LCE2DQ5TA82 110 aaPredicted RBP10.43□□□□□ -0.74
PHF3-206ENST00000503248 TIE1P35590 1138 aa10.42□□□□□ -0.74
PHF3-206ENST00000503248 MS4A3Q96HJ5 214 aa10.42□□□□□ -0.74
PHF3-206ENST00000503248 MAMSTRQ6ZN01 415 aa10.4□□□□□ -0.74
PHF3-206ENST00000503248 GOLGA2Q08379 1002 aa10.38□□□□□ -0.75
PHF3-206ENST00000503248 PAXIP1Q6ZW49 1069 aaPredicted RBP10.37□□□□□ -0.75
PHF3-206ENST00000503248 SOX12O15370 315 aa10.36□□□□□ -0.75
PHF3-206ENST00000503248 TMEM106CQ9BVX2 250 aa10.36□□□□□ -0.75
PHF3-206ENST00000503248 CFAP44Q96MT7 982 aa10.35□□□□□ -0.75
PHF3-206ENST00000503248 PELP1Q8IZL8 1130 aaKnown RBP10.34□□□□□ -0.75
PHF3-206ENST00000503248 CDAN1Q8IWY9 1227 aa10.32□□□□□ -0.76
PHF3-206ENST00000503248 CABP2Q9NPB3 220 aa10.32□□□□□ -0.76
PHF3-206ENST00000503248 METRNQ9UJH8 293 aa10.32□□□□□ -0.76
PHF3-206ENST00000503248 POTEJP0CG39 1038 aa10.31□□□□□ -0.76
PHF3-206ENST00000503248 NLRP6P59044 892 aa10.31□□□□□ -0.76
PHF3-206ENST00000503248 MKRN3Q13064 507 aaKnown RBP10.31□□□□□ -0.76
PHF3-206ENST00000503248 NKX1-1Q15270 411 aaPredicted RBP10.31□□□□□ -0.76
PHF3-206ENST00000503248 TTLL13PA6NNM8 815 aa10.29□□□□□ -0.76
PHF3-206ENST00000503248 GTPBP6O43824 516 aaPredicted RBP10.29□□□□□ -0.76
PHF3-206ENST00000503248 SCUBE2Q9NQ36 999 aa10.29□□□□□ -0.76
PHF3-206ENST00000503248 HAP1P54257 671 aaPredicted RBP10.28□□□□□ -0.76
PHF3-206ENST00000503248 BMP2KQ9NSY1 1161 aaPredicted RBP10.28□□□□□ -0.76
PHF3-206ENST00000503248 SLC39A7Q92504 469 aa10.27□□□□□ -0.77
PHF3-206ENST00000503248 C7P10643 843 aa10.26□□□□□ -0.77
PHF3-206ENST00000503248 IER5LQ5T953 404 aa10.26□□□□□ -0.77
PHF3-206ENST00000503248 ASTLQ6HA08 431 aaPredicted RBP10.26□□□□□ -0.77
PHF3-206ENST00000503248 EFCAB3Q8N7B9 438 aa10.26□□□□□ -0.77
PHF3-206ENST00000503248 VSIG10Q8N0Z9 540 aa10.25□□□□□ -0.77
PHF3-206ENST00000503248 MFRPQ9BY79 579 aa10.23□□□□□ -0.77
PHF3-206ENST00000503248 TRIM35Q9UPQ4 493 aa10.23□□□□□ -0.77
PHF3-206ENST00000503248 TRPC6Q9Y210 931 aa10.23□□□□□ -0.77
PHF3-206ENST00000503248 ATMINO43313 823 aaPredicted RBP10.22□□□□□ -0.77
PHF3-206ENST00000503248 FBXO22Q8NEZ5 403 aa10.2□□□□□ -0.78
PHF3-206ENST00000503248 ILDR1Q86SU0 546 aaPredicted RBP10.18□□□□□ -0.78
PHF3-206ENST00000503248 ATN1P54259 1190 aaPredicted RBP10.17□□□□□ -0.78
PHF3-206ENST00000503248 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.17□□□□□ -0.783e-8■■□□□ 12.2
PHF3-206ENST00000503248 PHF8Q9UPP1 1060 aa10.17□□□□□ -0.78
PHF3-206ENST00000503248 MMRN1Q13201 1228 aa10.16□□□□□ -0.78
PHF3-206ENST00000503248 OCEL1Q9H607 264 aa10.14□□□□□ -0.79
PHF3-206ENST00000503248 TSHZ2Q9NRE2 1034 aa10.13□□□□□ -0.79
PHF3-206ENST00000503248 PLCG2P16885 1265 aa10.11□□□□□ -0.79
PHF3-206ENST00000503248 G3V3G9 751 aa10.09□□□□□ -0.79
PHF3-206ENST00000503248 SEC24BO95487 1268 aa10.09□□□□□ -0.79
PHF3-206ENST00000503248 IRX5P78411 483 aaPredicted RBP10.09□□□□□ -0.79
PHF3-206ENST00000503248 MS4A4AQ96JQ5 239 aa10.09□□□□□ -0.79
PHF3-206ENST00000503248 SPNS2Q8IVW8 549 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms