RNA–Protein interactions for RNA: ENST00000503137.1

CCDC11P1-201, Transcript of coiled-coil domain containing 11 pseudogene 1, humanhuman

BASIC

Gene CCDC11P1, Length 1,162 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC11P1-201ENST00000503137 SP7Q8TDD2 431 aaPredicted RBP10.98□□□□□ -0.65
CCDC11P1-201ENST00000503137 TRIM41Q8WV44 630 aa10.98□□□□□ -0.65
CCDC11P1-201ENST00000503137 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.65
CCDC11P1-201ENST00000503137 MNX1P50219 401 aaPredicted RBP10.95□□□□□ -0.66
CCDC11P1-201ENST00000503137 NUBP1P53384 320 aa10.94□□□□□ -0.66
CCDC11P1-201ENST00000503137 FAM212AQ96EL1 285 aa10.94□□□□□ -0.66
CCDC11P1-201ENST00000503137 SLC24A1O60721 1099 aa10.93□□□□□ -0.66
CCDC11P1-201ENST00000503137 RB1CC1Q8TDY2 1594 aa10.93□□□□□ -0.66
CCDC11P1-201ENST00000503137 DCAF8Q5TAQ9 597 aa10.89□□□□□ -0.67
CCDC11P1-201ENST00000503137 HAX1O00165 279 aa10.86□□□□□ -0.67
CCDC11P1-201ENST00000503137 RGL2O15211 777 aa10.85□□□□□ -0.67
CCDC11P1-201ENST00000503137 FARP1Q9Y4F1 1045 aaPredicted RBP10.84□□□□□ -0.67
CCDC11P1-201ENST00000503137 RASEFQ8IZ41 740 aa10.82□□□□□ -0.68
CCDC11P1-201ENST00000503137 SCRIBQ14160 1630 aa10.81□□□□□ -0.68
CCDC11P1-201ENST00000503137 TAOK2Q9UL54 1235 aa10.79□□□□□ -0.68
CCDC11P1-201ENST00000503137 CHRM1P11229 460 aaPredicted RBP10.75□□□□□ -0.69
CCDC11P1-201ENST00000503137 PLCB2Q00722 1185 aa10.75□□□□□ -0.69
CCDC11P1-201ENST00000503137 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.74□□□□□ -0.69
CCDC11P1-201ENST00000503137 RIOK3O14730 519 aaKnown RBP10.73□□□□□ -0.69
CCDC11P1-201ENST00000503137 PAK3O75914 559 aaPredicted RBP10.73□□□□□ -0.69
CCDC11P1-201ENST00000503137 BBXQ8WY36 941 aaPredicted RBP10.73□□□□□ -0.69
CCDC11P1-201ENST00000503137 TSPYL2Q9H2G4 693 aaPredicted RBP10.72□□□□□ -0.69
CCDC11P1-201ENST00000503137 RNF25Q96BH1 459 aaPredicted RBP10.71□□□□□ -0.69
CCDC11P1-201ENST00000503137 CHGAP10645 457 aaKnown RBP10.7□□□□□ -0.7
CCDC11P1-201ENST00000503137 PYGBP11216 843 aa10.7□□□□□ -0.7
CCDC11P1-201ENST00000503137 C19orf67A6NJJ6 358 aa10.69□□□□□ -0.7
CCDC11P1-201ENST00000503137 SUPT5HO00267 1087 aaKnown RBP10.68□□□□□ -0.7
CCDC11P1-201ENST00000503137 VGFO15240 615 aaPredicted RBP10.68□□□□□ -0.7
CCDC11P1-201ENST00000503137 CD44P16070 742 aaKnown RBP10.68□□□□□ -0.7
CCDC11P1-201ENST00000503137 EVX2Q03828 476 aa10.68□□□□□ -0.7
CCDC11P1-201ENST00000503137 HS6ST3Q8IZP7 471 aa10.67□□□□□ -0.7
CCDC11P1-201ENST00000503137 ZNF467Q7Z7K2 595 aaPredicted RBP10.64□□□□□ -0.71
CCDC11P1-201ENST00000503137 CCDC61Q9Y6R9 512 aa10.63□□□□□ -0.71
CCDC11P1-201ENST00000503137 SGIP1Q9BQI5 828 aa10.61□□□□□ -0.71
CCDC11P1-201ENST00000503137 STK25O00506 426 aa10.6□□□□□ -0.71
CCDC11P1-201ENST00000503137 HAP1P54257 671 aaPredicted RBP10.6□□□□□ -0.71
CCDC11P1-201ENST00000503137 ZRANB1Q9UGI0 708 aa10.6□□□□□ -0.71
CCDC11P1-201ENST00000503137 PAXIP1Q6ZW49 1069 aaPredicted RBP10.58□□□□□ -0.72
CCDC11P1-201ENST00000503137 DNAJC5Q9H3Z4 198 aa10.58□□□□□ -0.72
CCDC11P1-201ENST00000503137 SPRYD3Q8NCJ5 442 aa10.57□□□□□ -0.72
CCDC11P1-201ENST00000503137 CFAP44Q96MT7 982 aa10.57□□□□□ -0.72
CCDC11P1-201ENST00000503137 UNC13AQ9UPW8 1703 aa10.56□□□□□ -0.72
CCDC11P1-201ENST00000503137 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.56□□□□□ -0.72
CCDC11P1-201ENST00000503137 ZFP91Q96JP5 570 aaPredicted RBP10.56□□□□□ -0.72
CCDC11P1-201ENST00000503137 ZNF579Q8NAF0 562 aaKnown RBP10.55□□□□□ -0.72
CCDC11P1-201ENST00000503137 STK24Q9Y6E0 443 aa10.54□□□□□ -0.72
CCDC11P1-201ENST00000503137 BICRAQ9NZM4 1560 aa10.53□□□□□ -0.72
CCDC11P1-201ENST00000503137 PDAP1Q13442 181 aaKnown RBP10.53□□□□□ -0.72
CCDC11P1-201ENST00000503137 BCL11BQ9C0K0 894 aaPredicted RBP10.53□□□□□ -0.72
CCDC11P1-201ENST00000503137 PCDHB13Q9Y5F0 798 aa10.52□□□□□ -0.73
CCDC11P1-201ENST00000503137 PHF12Q96QT6 1004 aa10.51□□□□□ -0.73
CCDC11P1-201ENST00000503137 RSF1Q96T23 1441 aaPredicted RBP10.5□□□□□ -0.73
CCDC11P1-201ENST00000503137 CECR2Q9BXF3 1484 aa10.5□□□□□ -0.73
CCDC11P1-201ENST00000503137 KIF12Q96FN5 646 aa10.49□□□□□ -0.73
CCDC11P1-201ENST00000503137 RYDENQ9NUL5 291 aaKnown RBP10.49□□□□□ -0.73
CCDC11P1-201ENST00000503137 PCDHB8Q9UN66 801 aa10.49□□□□□ -0.73
CCDC11P1-201ENST00000503137 MAP3K13O43283 966 aa10.48□□□□□ -0.73
CCDC11P1-201ENST00000503137 PSEN1P49768 467 aa10.46□□□□□ -0.73
CCDC11P1-201ENST00000503137 BAZ1AQ9NRL2 1556 aaPredicted RBP10.45□□□□□ -0.74
CCDC11P1-201ENST00000503137 IFNL1Q8IU54 200 aa10.45□□□□□ -0.74
CCDC11P1-201ENST00000503137 GABBR2O75899 941 aa10.44□□□□□ -0.74
CCDC11P1-201ENST00000503137 VSIG10Q8N0Z9 540 aa10.44□□□□□ -0.74
CCDC11P1-201ENST00000503137 NKX1-1Q15270 411 aaPredicted RBP10.43□□□□□ -0.74
CCDC11P1-201ENST00000503137 MROH2BQ7Z745 1585 aa10.43□□□□□ -0.74
CCDC11P1-201ENST00000503137 GALR2O43603 387 aaPredicted RBP10.38□□□□□ -0.75
CCDC11P1-201ENST00000503137 GTPBP6O43824 516 aaPredicted RBP10.38□□□□□ -0.75
CCDC11P1-201ENST00000503137 MS4A3Q96HJ5 214 aa10.37□□□□□ -0.75
CCDC11P1-201ENST00000503137 SMARCA4P51532 1647 aa10.36□□□□□ -0.75
CCDC11P1-201ENST00000503137 CLCN6P51797 869 aa10.35□□□□□ -0.75
CCDC11P1-201ENST00000503137 TSHZ2Q9NRE2 1034 aa10.34□□□□□ -0.75
CCDC11P1-201ENST00000503137 CABP2Q9NPB3 220 aa10.33□□□□□ -0.76
CCDC11P1-201ENST00000503137 GOLGA2Q08379 1002 aa10.31□□□□□ -0.76
CCDC11P1-201ENST00000503137 WIZO95785 1651 aa10.31□□□□□ -0.76
CCDC11P1-201ENST00000503137 LHX8Q68G74 356 aa10.3□□□□□ -0.76
CCDC11P1-201ENST00000503137 SOX12O15370 315 aa10.29□□□□□ -0.76
CCDC11P1-201ENST00000503137 TMEM106CQ9BVX2 250 aa10.29□□□□□ -0.76
CCDC11P1-201ENST00000503137 TIE1P35590 1138 aa10.28□□□□□ -0.76
CCDC11P1-201ENST00000503137 EFCAB3Q8N7B9 438 aa10.28□□□□□ -0.76
CCDC11P1-201ENST00000503137 TRPC6Q9Y210 931 aa10.28□□□□□ -0.76
CCDC11P1-201ENST00000503137 NLRP6P59044 892 aa10.27□□□□□ -0.77
CCDC11P1-201ENST00000503137 MFRPQ9BY79 579 aa10.27□□□□□ -0.77
CCDC11P1-201ENST00000503137 ATAD2BQ9ULI0 1458 aa10.26□□□□□ -0.77
CCDC11P1-201ENST00000503137 DCBLD2Q96PD2 775 aa10.26□□□□□ -0.77
CCDC11P1-201ENST00000503137 KDM2AQ9Y2K7 1162 aa10.26□□□□□ -0.77
CCDC11P1-201ENST00000503137 SMARCA2P51531 1590 aa10.26□□□□□ -0.77
CCDC11P1-201ENST00000503137 EIF4G1Q04637 1599 aaKnown RBP10.25□□□□□ -0.77
CCDC11P1-201ENST00000503137 PEG3Q9GZU2 1588 aa10.25□□□□□ -0.77
CCDC11P1-201ENST00000503137 TOP2AP11388 1531 aaKnown RBP10.24□□□□□ -0.77
CCDC11P1-201ENST00000503137 POTEIP0CG38 1075 aa10.23□□□□□ -0.77
CCDC11P1-201ENST00000503137 MKRN3Q13064 507 aaKnown RBP10.23□□□□□ -0.77
CCDC11P1-201ENST00000503137 TTLL13PA6NNM8 815 aa10.21□□□□□ -0.77
CCDC11P1-201ENST00000503137 FBXO22Q8NEZ5 403 aa10.21□□□□□ -0.77
CCDC11P1-201ENST00000503137 PHF8Q9UPP1 1060 aa10.21□□□□□ -0.77
CCDC11P1-201ENST00000503137 BAZ1BQ9UIG0 1483 aaKnown RBP10.21□□□□□ -0.78
CCDC11P1-201ENST00000503137 NCAPD3P42695 1498 aa10.2□□□□□ -0.78
CCDC11P1-201ENST00000503137 BCANQ96GW7 911 aa10.2□□□□□ -0.78
CCDC11P1-201ENST00000503137 BMP2KQ9NSY1 1161 aaPredicted RBP10.19□□□□□ -0.78
CCDC11P1-201ENST00000503137 CCDC88BA6NC98 1476 aa10.17□□□□□ -0.78
CCDC11P1-201ENST00000503137 ATMINO43313 823 aaPredicted RBP10.16□□□□□ -0.78
CCDC11P1-201ENST00000503137 TRIM35Q9UPQ4 493 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms