RNA–Protein interactions for RNA: ENST00000503080.1

UBE2B-203, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-203ENST00000503080 FAM212AQ96EL1 285 aa12.92□□□□□ -0.34
UBE2B-203ENST00000503080 PHF12Q96QT6 1004 aa12.92□□□□□ -0.34
UBE2B-203ENST00000503080 CCDC61Q9Y6R9 512 aa12.91□□□□□ -0.34
UBE2B-203ENST00000503080 DCAF8Q5TAQ9 597 aa12.89□□□□□ -0.35
UBE2B-203ENST00000503080 CLCN6P51797 869 aa12.87□□□□□ -0.35
UBE2B-203ENST00000503080 GSE1Q14687 1217 aa12.81□□□□□ -0.36
UBE2B-203ENST00000503080 GALR2O43603 387 aaPredicted RBP12.8□□□□□ -0.36
UBE2B-203ENST00000503080 KIF12Q96FN5 646 aa12.8□□□□□ -0.36
UBE2B-203ENST00000503080 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
UBE2B-203ENST00000503080 MAP3K13O43283 966 aa12.77□□□□□ -0.37
UBE2B-203ENST00000503080 MS4A3Q96HJ5 214 aa12.76□□□□□ -0.37
UBE2B-203ENST00000503080 PYGBP11216 843 aa12.75□□□□□ -0.37
UBE2B-203ENST00000503080 DCBLD2Q96PD2 775 aa12.7□□□□□ -0.38
UBE2B-203ENST00000503080 PCDHB13Q9Y5F0 798 aa12.7□□□□□ -0.38
UBE2B-203ENST00000503080 SGIP1Q9BQI5 828 aa12.68□□□□□ -0.38
UBE2B-203ENST00000503080 POTEIP0CG38 1075 aa12.66□□□□□ -0.38
UBE2B-203ENST00000503080 CHRM1P11229 460 aaPredicted RBP12.65□□□□□ -0.38
UBE2B-203ENST00000503080 IFNL1Q8IU54 200 aa12.64□□□□□ -0.39
UBE2B-203ENST00000503080 TRPC6Q9Y210 931 aa12.63□□□□□ -0.39
UBE2B-203ENST00000503080 TRIM41Q8WV44 630 aa12.59□□□□□ -0.39
UBE2B-203ENST00000503080 PCDHB8Q9UN66 801 aa12.59□□□□□ -0.39
UBE2B-203ENST00000503080 ZNF467Q7Z7K2 595 aaPredicted RBP12.56□□□□□ -0.4
UBE2B-203ENST00000503080 ATMINO43313 823 aaPredicted RBP12.55□□□□□ -0.4
UBE2B-203ENST00000503080 TIE1P35590 1138 aa12.55□□□□□ -0.4
UBE2B-203ENST00000503080 ASTLQ6HA08 431 aaPredicted RBP12.55□□□□□ -0.4
UBE2B-203ENST00000503080 BMP2KQ9NSY1 1161 aaPredicted RBP12.55□□□□□ -0.4
UBE2B-203ENST00000503080 PKD2Q13563 968 aa12.53□□□□□ -0.4
UBE2B-203ENST00000503080 TTLL13PA6NNM8 815 aa12.51□□□□□ -0.41
UBE2B-203ENST00000503080 ATN1P54259 1190 aaPredicted RBP12.51□□□□□ -0.41
UBE2B-203ENST00000503080 PELP1Q8IZL8 1130 aaKnown RBP12.51□□□□□ -0.41
UBE2B-203ENST00000503080 ECM2O94769 699 aaPredicted RBP12.49□□□□□ -0.41
UBE2B-203ENST00000503080 TMEM106CQ9BVX2 250 aa12.49□□□□□ -0.41
UBE2B-203ENST00000503080 RNF25Q96BH1 459 aaPredicted RBP12.46□□□□□ -0.41
UBE2B-203ENST00000503080 PSEN1P49768 467 aa12.45□□□□□ -0.42
UBE2B-203ENST00000503080 PDAP1Q13442 181 aaKnown RBP12.44□□□□□ -0.42
UBE2B-203ENST00000503080 TRIM35Q9UPQ4 493 aa12.44□□□□□ -0.42
UBE2B-203ENST00000503080 RIOK3O14730 519 aaKnown RBP12.43□□□□□ -0.42
UBE2B-203ENST00000503080 SLC39A7Q92504 469 aa12.41□□□□□ -0.42
UBE2B-203ENST00000503080 C7P10643 843 aa12.39□□□□□ -0.43
UBE2B-203ENST00000503080 METRNQ9UJH8 293 aa12.39□□□□□ -0.43
UBE2B-203ENST00000503080 RGL2O15211 777 aa12.37□□□□□ -0.43
UBE2B-203ENST00000503080 VGFO15240 615 aaPredicted RBP12.35□□□□□ -0.43
UBE2B-203ENST00000503080 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.32□□□□□ -0.44
UBE2B-203ENST00000503080 GOLGA2Q08379 1002 aa12.32□□□□□ -0.44
UBE2B-203ENST00000503080 IER5LQ5T953 404 aa12.32□□□□□ -0.44
UBE2B-203ENST00000503080 ZFP91Q96JP5 570 aaPredicted RBP12.32□□□□□ -0.44
UBE2B-203ENST00000503080 LHX8Q68G74 356 aa12.31□□□□□ -0.44
UBE2B-203ENST00000503080 TAOK2Q9UL54 1235 aa12.31□□□□□ -0.44
UBE2B-203ENST00000503080 CABP2Q9NPB3 220 aa12.3□□□□□ -0.44
UBE2B-203ENST00000503080 SEC24BO95487 1268 aa12.29□□□□□ -0.44
UBE2B-203ENST00000503080 POTEFA5A3E0 1075 aa12.28□□□□□ -0.44
UBE2B-203ENST00000503080 MKRN3Q13064 507 aaKnown RBP12.28□□□□□ -0.44
UBE2B-203ENST00000503080 COLQQ9Y215 455 aaPredicted RBP12.28□□□□□ -0.44
UBE2B-203ENST00000503080 POTEB2H3BUK9 544 aa12.26□□□□□ -0.45
UBE2B-203ENST00000503080 IRX5P78411 483 aaPredicted RBP12.24□□□□□ -0.45
UBE2B-203ENST00000503080 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
UBE2B-203ENST00000503080 BCL11BQ9C0K0 894 aaPredicted RBP12.23□□□□□ -0.45
UBE2B-203ENST00000503080 STK25O00506 426 aa12.22□□□□□ -0.45
UBE2B-203ENST00000503080 PLCG2P16885 1265 aa12.22□□□□□ -0.45
UBE2B-203ENST00000503080 OCEL1Q9H607 264 aa12.22□□□□□ -0.45
UBE2B-203ENST00000503080 EFCAB3Q8N7B9 438 aa12.21□□□□□ -0.45
UBE2B-203ENST00000503080 STK24Q9Y6E0 443 aa12.21□□□□□ -0.45
UBE2B-203ENST00000503080 RTN4Q9NQC3 1192 aaKnown RBP12.2□□□□□ -0.46
UBE2B-203ENST00000503080 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.2□□□□□ -0.46
UBE2B-203ENST00000503080 POTEJP0CG39 1038 aa12.16□□□□□ -0.46
UBE2B-203ENST00000503080 PDCD7Q8N8D1 485 aaKnown RBP12.14□□□□□ -0.47
UBE2B-203ENST00000503080 ILDR1Q86SU0 546 aaPredicted RBP12.13□□□□□ -0.47
UBE2B-203ENST00000503080 DCAF8L2P0C7V8 631 aa12.12□□□□□ -0.47
UBE2B-203ENST00000503080 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
UBE2B-203ENST00000503080 SOX12O15370 315 aa12.11□□□□□ -0.47
UBE2B-203ENST00000503080 OTUD5Q96G74 571 aa12.11□□□□□ -0.47
UBE2B-203ENST00000503080 HS6ST3Q8IZP7 471 aa12.09□□□□□ -0.47
UBE2B-203ENST00000503080 DPY19L2Q6NUT2 758 aa12.08□□□□□ -0.48
UBE2B-203ENST00000503080 MAMSTRQ6ZN01 415 aa12.08□□□□□ -0.48
UBE2B-203ENST00000503080 PHF8Q9UPP1 1060 aa12.08□□□□□ -0.48
UBE2B-203ENST00000503080 SCUBE2Q9NQ36 999 aa12.06□□□□□ -0.48
UBE2B-203ENST00000503080 L3MBTL3Q96JM7 780 aaPredicted RBP12.04□□□□□ -0.48
UBE2B-203ENST00000503080 NLRP6P59044 892 aa12.03□□□□□ -0.48
UBE2B-203ENST00000503080 MS4A4AQ96JQ5 239 aa12.03□□□□□ -0.48
UBE2B-203ENST00000503080 MFRPQ9BY79 579 aa12.03□□□□□ -0.48
UBE2B-203ENST00000503080 FBXO22Q8NEZ5 403 aa12.01□□□□□ -0.49
UBE2B-203ENST00000503080 G3V3G9 751 aa11.98□□□□□ -0.49
UBE2B-203ENST00000503080 BOLA1Q9Y3E2 137 aa11.98□□□□□ -0.49
UBE2B-203ENST00000503080 DNAJC5Q9H3Z4 198 aa11.96□□□□□ -0.49
UBE2B-203ENST00000503080 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.95□□□□□ -0.5
UBE2B-203ENST00000503080 NKX1-1Q15270 411 aaPredicted RBP11.94□□□□□ -0.5
UBE2B-203ENST00000503080 C3orf67Q6ZVT6 689 aa11.94□□□□□ -0.5
UBE2B-203ENST00000503080 SLAIN1Q8ND83 568 aa11.92□□□□□ -0.5
UBE2B-203ENST00000503080 TMEM121BQ9BXQ6 578 aaPredicted RBP11.91□□□□□ -0.5
UBE2B-203ENST00000503080 MICALL2Q8IY33 904 aa11.9□□□□□ -0.5
UBE2B-203ENST00000503080 PPP1R37O75864 691 aa11.87□□□□□ -0.51
UBE2B-203ENST00000503080 RYDENQ9NUL5 291 aaKnown RBP11.83□□□□□ -0.52
UBE2B-203ENST00000503080 GTPBP6O43824 516 aaPredicted RBP11.8□□□□□ -0.52
UBE2B-203ENST00000503080 BBXQ8WY36 941 aaPredicted RBP11.8□□□□□ -0.52
UBE2B-203ENST00000503080 TMEM92Q6UXU6 159 aa11.78□□□□□ -0.52
UBE2B-203ENST00000503080 FAM163AQ96GL9 167 aaPredicted RBP11.74□□□□□ -0.53
UBE2B-203ENST00000503080 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.72□□□□□ -0.53
UBE2B-203ENST00000503080 SNPHO15079 494 aa11.71□□□□□ -0.53
UBE2B-203ENST00000503080 C2orf72A6NCS6 295 aa11.68□□□□□ -0.54
UBE2B-203ENST00000503080 SPRYD3Q8NCJ5 442 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms