RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 ATMINO43313 823 aaPredicted RBP14.06□□□□□ -0.16
PROM1-203ENST00000502943 METRNQ9UJH8 293 aa14.04□□□□□ -0.16
PROM1-203ENST00000502943 MIER1Q8N108 512 aa14.02□□□□□ -0.17
PROM1-203ENST00000502943 KIF12Q96FN5 646 aa14□□□□□ -0.17
PROM1-203ENST00000502943 SLC39A7Q92504 469 aa13.99□□□□□ -0.17
PROM1-203ENST00000502943 RASEFQ8IZ41 740 aa13.98□□□□□ -0.17
PROM1-203ENST00000502943 PLEKHG5O94827 1062 aa13.97□□□□□ -0.17
PROM1-203ENST00000502943 C7P10643 843 aa13.97□□□□□ -0.17
PROM1-203ENST00000502943 ATN1P54259 1190 aaPredicted RBP13.96□□□□□ -0.17
PROM1-203ENST00000502943 POTEJP0CG39 1038 aa13.95□□□□□ -0.18
PROM1-203ENST00000502943 TRPC6Q9Y210 931 aa13.94□□□□□ -0.18
PROM1-203ENST00000502943 MAP3K13O43283 966 aa13.92□□□□□ -0.18
PROM1-203ENST00000502943 PLCD3Q8N3E9 789 aa13.9□□□□□ -0.18
PROM1-203ENST00000502943 PLSCR2Q9NRY7 297 aa13.9□□□□□ -0.18
PROM1-203ENST00000502943 BMP2KQ9NSY1 1161 aaPredicted RBP13.9□□□□□ -0.18
PROM1-203ENST00000502943 POTEFA5A3E0 1075 aa13.82□□□□□ -0.2
PROM1-203ENST00000502943 POTEMA6NI47 508 aa13.82□□□□□ -0.2
PROM1-203ENST00000502943 TIE1P35590 1138 aa13.81□□□□□ -0.2
PROM1-203ENST00000502943 MAMSTRQ6ZN01 415 aa13.8□□□□□ -0.2
PROM1-203ENST00000502943 FKBP8Q14318 412 aa13.79□□□□□ -0.2
PROM1-203ENST00000502943 POTEGQ6S5H5 508 aa13.79□□□□□ -0.2
PROM1-203ENST00000502943 NUBP1P53384 320 aa13.78□□□□□ -0.2
PROM1-203ENST00000502943 TTLL13PA6NNM8 815 aa13.77□□□□□ -0.21
PROM1-203ENST00000502943 PCDHB13Q9Y5F0 798 aa13.75□□□□□ -0.21
PROM1-203ENST00000502943 SCUBE2Q9NQ36 999 aa13.74□□□□□ -0.21
PROM1-203ENST00000502943 ZBTB47Q9UFB7 747 aaPredicted RBP13.74□□□□□ -0.21
PROM1-203ENST00000502943 COLQQ9Y215 455 aaPredicted RBP13.73□□□□□ -0.21
PROM1-203ENST00000502943 SGIP1Q9BQI5 828 aa13.69□□□□□ -0.22
PROM1-203ENST00000502943 TRIM35Q9UPQ4 493 aa13.69□□□□□ -0.22
PROM1-203ENST00000502943 SEC24BO95487 1268 aa13.68□□□□□ -0.22
PROM1-203ENST00000502943 LCE2DQ5TA82 110 aaPredicted RBP13.68□□□□□ -0.22
PROM1-203ENST00000502943 IFNL1Q8IU54 200 aa13.68□□□□□ -0.22
PROM1-203ENST00000502943 FAM212AQ96EL1 285 aa13.67□□□□□ -0.22
PROM1-203ENST00000502943 FAM163AQ96GL9 167 aaPredicted RBP13.65□□□□□ -0.22
PROM1-203ENST00000502943 IER5LQ5T953 404 aa13.61□□□□□ -0.23
PROM1-203ENST00000502943 TMEM106CQ9BVX2 250 aa13.6□□□□□ -0.23
PROM1-203ENST00000502943 PYGBP11216 843 aa13.54□□□□□ -0.24
PROM1-203ENST00000502943 DCAF8Q5TAQ9 597 aa13.54□□□□□ -0.24
PROM1-203ENST00000502943 PCDH10Q9P2E7 1040 aa13.51□□□□□ -0.25
PROM1-203ENST00000502943 FBXO3Q9UK99 471 aa13.49□□□□□ -0.25
PROM1-203ENST00000502943 PLCG2P16885 1265 aa13.48□□□□□ -0.25
PROM1-203ENST00000502943 PCDHB8Q9UN66 801 aa13.47□□□□□ -0.25
PROM1-203ENST00000502943 IRX5P78411 483 aaPredicted RBP13.46□□□□□ -0.25
PROM1-203ENST00000502943 SLAIN1Q8ND83 568 aa13.45□□□□□ -0.26
PROM1-203ENST00000502943 VASPP50552 380 aaPredicted RBP13.39□□□□□ -0.27
PROM1-203ENST00000502943 KLHL34Q8N239 644 aa13.39□□□□□ -0.27
PROM1-203ENST00000502943 OCEL1Q9H607 264 aa13.37□□□□□ -0.27
PROM1-203ENST00000502943 ST18O60284 1047 aa13.35□□□□□ -0.27
PROM1-203ENST00000502943 GSE1Q14687 1217 aa13.31□□□□□ -0.28
PROM1-203ENST00000502943 CDAN1Q8IWY9 1227 aa13.31□□□□□ -0.28
PROM1-203ENST00000502943 ZNF467Q7Z7K2 595 aaPredicted RBP13.28□□□□□ -0.28
PROM1-203ENST00000502943 PDCD7Q8N8D1 485 aaKnown RBP13.25□□□□□ -0.29
PROM1-203ENST00000502943 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.25□□□□□ -0.29
PROM1-203ENST00000502943 CHRM1P11229 460 aaPredicted RBP13.22□□□□□ -0.29
PROM1-203ENST00000502943 GOLGA2Q08379 1002 aa13.22□□□□□ -0.29
PROM1-203ENST00000502943 PSEN1P49768 467 aa13.2□□□□□ -0.3
PROM1-203ENST00000502943 MKRN3Q13064 507 aaKnown RBP13.2□□□□□ -0.3
PROM1-203ENST00000502943 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.16□□□□□ -0.3
PROM1-203ENST00000502943 C3orf67Q6ZVT6 689 aa13.15□□□□□ -0.3
PROM1-203ENST00000502943 IFNLR1Q8IU57 520 aaPredicted RBP13.15□□□□□ -0.3
PROM1-203ENST00000502943 SNPHO15079 494 aa13.14□□□□□ -0.31
PROM1-203ENST00000502943 MARVELD3Q96A59 401 aa13.14□□□□□ -0.31
PROM1-203ENST00000502943 TMEM121BQ9BXQ6 578 aaPredicted RBP13.14□□□□□ -0.31
PROM1-203ENST00000502943 SPOCK2Q92563 424 aa13.13□□□□□ -0.31
PROM1-203ENST00000502943 L3MBTL3Q96JM7 780 aaPredicted RBP13.12□□□□□ -0.31
PROM1-203ENST00000502943 CIZ1Q9ULV3 898 aaPredicted RBP13.12□□□□□ -0.31
PROM1-203ENST00000502943 PDAP1Q13442 181 aaKnown RBP13.11□□□□□ -0.31
PROM1-203ENST00000502943 DPY19L2Q6NUT2 758 aa13.08□□□□□ -0.32
PROM1-203ENST00000502943 CABP2Q9NPB3 220 aa13.07□□□□□ -0.32
PROM1-203ENST00000502943 ILDR1Q86SU0 546 aaPredicted RBP13.06□□□□□ -0.32
PROM1-203ENST00000502943 EMP3P54852 163 aa13□□□□□ -0.33
PROM1-203ENST00000502943 SPNS2Q8IVW8 549 aa13□□□□□ -0.33
PROM1-203ENST00000502943 MMRN1Q13201 1228 aa12.97□□□□□ -0.33
PROM1-203ENST00000502943 BOLA1Q9Y3E2 137 aa12.96□□□□□ -0.33
PROM1-203ENST00000502943 POTEB3A0JP26 581 aa12.94□□□□□ -0.34
PROM1-203ENST00000502943 POTEBQ6S5H4 581 aa12.94□□□□□ -0.34
PROM1-203ENST00000502943 G3V3G9 751 aa12.92□□□□□ -0.34
PROM1-203ENST00000502943 FAM205CA6NFA0 338 aa12.91□□□□□ -0.34
PROM1-203ENST00000502943 HS3ST6Q96QI5 342 aa12.91□□□□□ -0.34
PROM1-203ENST00000502943 EFCAB3Q8N7B9 438 aa12.89□□□□□ -0.35
PROM1-203ENST00000502943 HOXB3P14651 431 aaPredicted RBP12.88□□□□□ -0.35
PROM1-203ENST00000502943 KRTAP3-3Q9BYR6 98 aa12.87□□□□□ -0.35
PROM1-203ENST00000502943 KRTAP3-2Q9BYR7 98 aa12.87□□□□□ -0.35
PROM1-203ENST00000502943 TRIM41Q8WV44 630 aa12.84□□□□□ -0.35
PROM1-203ENST00000502943 ZNF710Q8N1W2 664 aa12.78□□□□□ -0.36
PROM1-203ENST00000502943 RNF25Q96BH1 459 aaPredicted RBP12.78□□□□□ -0.36
PROM1-203ENST00000502943 HOXB1P14653 301 aaPredicted RBP12.76□□□□□ -0.37
PROM1-203ENST00000502943 DOK7Q18PE1 504 aa12.76□□□□□ -0.37
PROM1-203ENST00000502943 RIOK3O14730 519 aaKnown RBP12.75□□□□□ -0.37
PROM1-203ENST00000502943 MICALL2Q8IY33 904 aa12.75□□□□□ -0.37
PROM1-203ENST00000502943 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.74□□□□□ -0.37
PROM1-203ENST00000502943 TMEM92Q6UXU6 159 aa12.74□□□□□ -0.37
PROM1-203ENST00000502943 ZFP91Q96JP5 570 aaPredicted RBP12.74□□□□□ -0.37
PROM1-203ENST00000502943 MS4A4AQ96JQ5 239 aa12.72□□□□□ -0.37
PROM1-203ENST00000502943 ERBB3P21860 1342 aa12.71□□□□□ -0.37
PROM1-203ENST00000502943 PHF8Q9UPP1 1060 aa12.7□□□□□ -0.38
PROM1-203ENST00000502943 SOX12O15370 315 aa12.69□□□□□ -0.38
PROM1-203ENST00000502943 VGFO15240 615 aaPredicted RBP12.68□□□□□ -0.38
PROM1-203ENST00000502943 RIMBP2O15034 1052 aa12.66□□□□□ -0.38
PROM1-203ENST00000502943 VARS2Q5ST30 1063 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms