RNA–Protein interactions for RNA: ENST00000502582.1

CDC42SE2-203, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-203ENST00000502582 CCDC61Q9Y6R9 512 aa10.38□□□□□ -0.75
CDC42SE2-203ENST00000502582 POTEIP0CG38 1075 aa10.36□□□□□ -0.75
CDC42SE2-203ENST00000502582 NUBP1P53384 320 aa10.36□□□□□ -0.75
CDC42SE2-203ENST00000502582 KLHL34Q8N239 644 aa10.32□□□□□ -0.76
CDC42SE2-203ENST00000502582 FAM212AQ96EL1 285 aa10.31□□□□□ -0.76
CDC42SE2-203ENST00000502582 KIF12Q96FN5 646 aa10.31□□□□□ -0.76
CDC42SE2-203ENST00000502582 MS4A3Q96HJ5 214 aa10.3□□□□□ -0.76
CDC42SE2-203ENST00000502582 MAP3K13O43283 966 aa10.26□□□□□ -0.77
CDC42SE2-203ENST00000502582 DCAF8Q5TAQ9 597 aa10.26□□□□□ -0.77
CDC42SE2-203ENST00000502582 LHX8Q68G74 356 aa10.22□□□□□ -0.77
CDC42SE2-203ENST00000502582 IFNLR1Q8IU57 520 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE2-203ENST00000502582 SGIP1Q9BQI5 828 aa10.22□□□□□ -0.77
CDC42SE2-203ENST00000502582 ASTLQ6HA08 431 aaPredicted RBP10.2□□□□□ -0.78
CDC42SE2-203ENST00000502582 ATMINO43313 823 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE2-203ENST00000502582 PCDHB13Q9Y5F0 798 aa10.19□□□□□ -0.78
CDC42SE2-203ENST00000502582 GSE1Q14687 1217 aa10.18□□□□□ -0.78
CDC42SE2-203ENST00000502582 SPOCK2Q92563 424 aa10.17□□□□□ -0.78
CDC42SE2-203ENST00000502582 PELP1Q8IZL8 1130 aaKnown RBP10.16□□□□□ -0.78
CDC42SE2-203ENST00000502582 PYGBP11216 843 aa10.15□□□□□ -0.78
CDC42SE2-203ENST00000502582 TIE1P35590 1138 aa10.15□□□□□ -0.78
CDC42SE2-203ENST00000502582 TRPC6Q9Y210 931 aa10.15□□□□□ -0.78
CDC42SE2-203ENST00000502582 BMP2KQ9NSY1 1161 aaPredicted RBP10.14□□□□□ -0.79
CDC42SE2-203ENST00000502582 ATN1P54259 1190 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE2-203ENST00000502582 IFNL1Q8IU54 200 aa10.13□□□□□ -0.79
CDC42SE2-203ENST00000502582 SLC39A7Q92504 469 aa10.12□□□□□ -0.79
CDC42SE2-203ENST00000502582 C7P10643 843 aa10.11□□□□□ -0.79
CDC42SE2-203ENST00000502582 TTLL13PA6NNM8 815 aa10.09□□□□□ -0.79
CDC42SE2-203ENST00000502582 METRNQ9UJH8 293 aa10.09□□□□□ -0.79
CDC42SE2-203ENST00000502582 CIZ1Q9ULV3 898 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE2-203ENST00000502582 CHRM1P11229 460 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE2-203ENST00000502582 TMEM106CQ9BVX2 250 aa10.04□□□□□ -0.8
CDC42SE2-203ENST00000502582 PCDHB8Q9UN66 801 aa10.04□□□□□ -0.8
CDC42SE2-203ENST00000502582 ZNF467Q7Z7K2 595 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE2-203ENST00000502582 TRIM35Q9UPQ4 493 aa10.03□□□□□ -0.8
CDC42SE2-203ENST00000502582 POTEB2H3BUK9 544 aa10.02□□□□□ -0.81
CDC42SE2-203ENST00000502582 IER5LQ5T953 404 aa9.99□□□□□ -0.81
CDC42SE2-203ENST00000502582 SEC24BO95487 1268 aa9.97□□□□□ -0.81
CDC42SE2-203ENST00000502582 TRIM41Q8WV44 630 aa9.96□□□□□ -0.82
CDC42SE2-203ENST00000502582 POTEFA5A3E0 1075 aa9.95□□□□□ -0.82
CDC42SE2-203ENST00000502582 OTUD5Q96G74 571 aa9.95□□□□□ -0.82
CDC42SE2-203ENST00000502582 COLQQ9Y215 455 aaPredicted RBP9.93□□□□□ -0.82
CDC42SE2-203ENST00000502582 PSEN1P49768 467 aa9.92□□□□□ -0.82
CDC42SE2-203ENST00000502582 MAMSTRQ6ZN01 415 aa9.92□□□□□ -0.82
CDC42SE2-203ENST00000502582 POTEJP0CG39 1038 aa9.91□□□□□ -0.82
CDC42SE2-203ENST00000502582 PDAP1Q13442 181 aaKnown RBP9.91□□□□□ -0.82
CDC42SE2-203ENST00000502582 PLCG2P16885 1265 aa9.88□□□□□ -0.83
CDC42SE2-203ENST00000502582 GOLGA2Q08379 1002 aa9.88□□□□□ -0.83
CDC42SE2-203ENST00000502582 IRX5P78411 483 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE2-203ENST00000502582 SCUBE2Q9NQ36 999 aa9.87□□□□□ -0.83
CDC42SE2-203ENST00000502582 OCEL1Q9H607 264 aa9.86□□□□□ -0.83
CDC42SE2-203ENST00000502582 MKRN3Q13064 507 aaKnown RBP9.85□□□□□ -0.83
CDC42SE2-203ENST00000502582 RIOK3O14730 519 aaKnown RBP9.8□□□□□ -0.84
CDC42SE2-203ENST00000502582 CABP2Q9NPB3 220 aa9.8□□□□□ -0.84
CDC42SE2-203ENST00000502582 RNF25Q96BH1 459 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE2-203ENST00000502582 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.78□□□□□ -0.84
CDC42SE2-203ENST00000502582 VGFO15240 615 aaPredicted RBP9.76□□□□□ -0.85
CDC42SE2-203ENST00000502582 PDCD7Q8N8D1 485 aaKnown RBP9.76□□□□□ -0.85
CDC42SE2-203ENST00000502582 ECM2O94769 699 aaPredicted RBP9.75□□□□□ -0.85
CDC42SE2-203ENST00000502582 TAOK2Q9UL54 1235 aa9.74□□□□□ -0.85
CDC42SE2-203ENST00000502582 PKD2Q13563 968 aa9.73□□□□□ -0.85
CDC42SE2-203ENST00000502582 ILDR1Q86SU0 546 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE2-203ENST00000502582 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE2-203ENST00000502582 L3MBTL3Q96JM7 780 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE2-203ENST00000502582 ZFP91Q96JP5 570 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE2-203ENST00000502582 EFCAB3Q8N7B9 438 aa9.7□□□□□ -0.86
CDC42SE2-203ENST00000502582 SLAIN1Q8ND83 568 aa9.7□□□□□ -0.86
CDC42SE2-203ENST00000502582 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.68□□□□□ -0.86
CDC42SE2-203ENST00000502582 DPY19L2Q6NUT2 758 aa9.66□□□□□ -0.86
CDC42SE2-203ENST00000502582 SOX12O15370 315 aa9.65□□□□□ -0.86
CDC42SE2-203ENST00000502582 C3orf67Q6ZVT6 689 aa9.65□□□□□ -0.86
CDC42SE2-203ENST00000502582 FAM163AQ96GL9 167 aaPredicted RBP9.65□□□□□ -0.86
CDC42SE2-203ENST00000502582 G3V3G9 751 aa9.64□□□□□ -0.87
CDC42SE2-203ENST00000502582 RGL2O15211 777 aa9.64□□□□□ -0.87
CDC42SE2-203ENST00000502582 BCL11BQ9C0K0 894 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE2-203ENST00000502582 BOLA1Q9Y3E2 137 aa9.62□□□□□ -0.87
CDC42SE2-203ENST00000502582 STK24Q9Y6E0 443 aa9.62□□□□□ -0.87
CDC42SE2-203ENST00000502582 STK25O00506 426 aa9.61□□□□□ -0.87
CDC42SE2-203ENST00000502582 POTEMA6NI47 508 aa9.59□□□□□ -0.87
CDC42SE2-203ENST00000502582 LCE2DQ5TA82 110 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE2-203ENST00000502582 PHF8Q9UPP1 1060 aa9.58□□□□□ -0.88
CDC42SE2-203ENST00000502582 SNPHO15079 494 aa9.57□□□□□ -0.88
CDC42SE2-203ENST00000502582 POTEGQ6S5H5 508 aa9.57□□□□□ -0.88
CDC42SE2-203ENST00000502582 NLRP6P59044 892 aa9.56□□□□□ -0.88
CDC42SE2-203ENST00000502582 TMEM121BQ9BXQ6 578 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE2-203ENST00000502582 MS4A4AQ96JQ5 239 aa9.55□□□□□ -0.88
CDC42SE2-203ENST00000502582 ST18O60284 1047 aa9.52□□□□□ -0.89
CDC42SE2-203ENST00000502582 MICALL2Q8IY33 904 aa9.51□□□□□ -0.89
CDC42SE2-203ENST00000502582 FBXO22Q8NEZ5 403 aa9.51□□□□□ -0.89
CDC42SE2-203ENST00000502582 MFRPQ9BY79 579 aa9.51□□□□□ -0.89
CDC42SE2-203ENST00000502582 PCDH10Q9P2E7 1040 aa9.47□□□□□ -0.89
CDC42SE2-203ENST00000502582 HS6ST3Q8IZP7 471 aa9.45□□□□□ -0.9
CDC42SE2-203ENST00000502582 CHGAP10645 457 aaKnown RBP9.43□□□□□ -0.9
CDC42SE2-203ENST00000502582 TMEM92Q6UXU6 159 aa9.42□□□□□ -0.9
CDC42SE2-203ENST00000502582 AMER1Q5JTC6 1135 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE2-203ENST00000502582 DOK7Q18PE1 504 aa9.39□□□□□ -0.91
CDC42SE2-203ENST00000502582 HOXB3P14651 431 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE2-203ENST00000502582 MARVELD3Q96A59 401 aa9.38□□□□□ -0.91
CDC42SE2-203ENST00000502582 ZNF710Q8N1W2 664 aa9.37□□□□□ -0.91
CDC42SE2-203ENST00000502582 CDAN1Q8IWY9 1227 aa9.36□□□□□ -0.91
CDC42SE2-203ENST00000502582 DNAJC5Q9H3Z4 198 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms