RNA–Protein interactions for RNA: ENST00000502478.1

CCSER1-202, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 744 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-202ENST00000502478 ZBTB47Q9UFB7 747 aaPredicted RBP15.37■□□□□ 0.05
CCSER1-202ENST00000502478 MS4A3Q96HJ5 214 aa15.34■□□□□ 0.05
CCSER1-202ENST00000502478 FBXO3Q9UK99 471 aa15.34■□□□□ 0.05
CCSER1-202ENST00000502478 KIF12Q96FN5 646 aa15.28■□□□□ 0.04
CCSER1-202ENST00000502478 NUBP1P53384 320 aa15.27■□□□□ 0.04
CCSER1-202ENST00000502478 ASTLQ6HA08 431 aaPredicted RBP15.22■□□□□ 0.03
CCSER1-202ENST00000502478 PELP1Q8IZL8 1130 aaKnown RBP15.19■□□□□ 0.02
CCSER1-202ENST00000502478 MAP3K13O43283 966 aa15.18■□□□□ 0.02
CCSER1-202ENST00000502478 ATMINO43313 823 aaPredicted RBP15.18■□□□□ 0.02
CCSER1-202ENST00000502478 VASPP50552 380 aaPredicted RBP15.16■□□□□ 0.02
CCSER1-202ENST00000502478 FAM212AQ96EL1 285 aa15.15■□□□□ 0.02
CCSER1-202ENST00000502478 SGIP1Q9BQI5 828 aa15.1■□□□□ 0.01
CCSER1-202ENST00000502478 TRPC6Q9Y210 931 aa15.1■□□□□ 0.01
CCSER1-202ENST00000502478 SLC39A7Q92504 469 aa15.08■□□□□ 0
CCSER1-202ENST00000502478 BMP2KQ9NSY1 1161 aaPredicted RBP15.08■□□□□ 0
CCSER1-202ENST00000502478 TIE1P35590 1138 aa15.07■□□□□ 0
CCSER1-202ENST00000502478 ATN1P54259 1190 aaPredicted RBP15.07■□□□□ 0
CCSER1-202ENST00000502478 METRNQ9UJH8 293 aa15.06■□□□□ 0
CCSER1-202ENST00000502478 PCDHB13Q9Y5F0 798 aa15.06■□□□□ 0
CCSER1-202ENST00000502478 POTEB2H3BUK9 544 aa15.05■□□□□ -0
CCSER1-202ENST00000502478 C7P10643 843 aa15.05■□□□□ -0
CCSER1-202ENST00000502478 KLHL34Q8N239 644 aa15.02■□□□□ -0
CCSER1-202ENST00000502478 DCAF8Q5TAQ9 597 aa15□□□□□ -0.01
CCSER1-202ENST00000502478 TTLL13PA6NNM8 815 aa14.98□□□□□ -0.01
CCSER1-202ENST00000502478 IFNL1Q8IU54 200 aa14.98□□□□□ -0.01
CCSER1-202ENST00000502478 OTUD5Q96G74 571 aa14.96□□□□□ -0.01
CCSER1-202ENST00000502478 PYGBP11216 843 aa14.92□□□□□ -0.02
CCSER1-202ENST00000502478 GSE1Q14687 1217 aa14.91□□□□□ -0.02
CCSER1-202ENST00000502478 IFNLR1Q8IU57 520 aaPredicted RBP14.89□□□□□ -0.03
CCSER1-202ENST00000502478 TRIM35Q9UPQ4 493 aa14.88□□□□□ -0.03
CCSER1-202ENST00000502478 POTEFA5A3E0 1075 aa14.87□□□□□ -0.03
CCSER1-202ENST00000502478 POTEJP0CG39 1038 aa14.87□□□□□ -0.03
CCSER1-202ENST00000502478 TMEM106CQ9BVX2 250 aa14.85□□□□□ -0.03
CCSER1-202ENST00000502478 IER5LQ5T953 404 aa14.83□□□□□ -0.04
CCSER1-202ENST00000502478 SPOCK2Q92563 424 aa14.83□□□□□ -0.04
CCSER1-202ENST00000502478 MAMSTRQ6ZN01 415 aa14.8□□□□□ -0.04
CCSER1-202ENST00000502478 PCDHB8Q9UN66 801 aa14.8□□□□□ -0.04
CCSER1-202ENST00000502478 COLQQ9Y215 455 aaPredicted RBP14.8□□□□□ -0.04
CCSER1-202ENST00000502478 CHRM1P11229 460 aaPredicted RBP14.79□□□□□ -0.04
CCSER1-202ENST00000502478 SEC24BO95487 1268 aa14.77□□□□□ -0.05
CCSER1-202ENST00000502478 ZNF467Q7Z7K2 595 aaPredicted RBP14.74□□□□□ -0.05
CCSER1-202ENST00000502478 SCUBE2Q9NQ36 999 aa14.73□□□□□ -0.05
CCSER1-202ENST00000502478 CIZ1Q9ULV3 898 aaPredicted RBP14.68□□□□□ -0.06
CCSER1-202ENST00000502478 IRX5P78411 483 aaPredicted RBP14.67□□□□□ -0.06
CCSER1-202ENST00000502478 PLCG2P16885 1265 aa14.65□□□□□ -0.06
CCSER1-202ENST00000502478 PSEN1P49768 467 aa14.59□□□□□ -0.07
CCSER1-202ENST00000502478 OCEL1Q9H607 264 aa14.59□□□□□ -0.07
CCSER1-202ENST00000502478 PDAP1Q13442 181 aaKnown RBP14.56□□□□□ -0.08
CCSER1-202ENST00000502478 TRIM41Q8WV44 630 aa14.56□□□□□ -0.08
CCSER1-202ENST00000502478 GOLGA2Q08379 1002 aa14.52□□□□□ -0.09
CCSER1-202ENST00000502478 MKRN3Q13064 507 aaKnown RBP14.51□□□□□ -0.09
CCSER1-202ENST00000502478 PDCD7Q8N8D1 485 aaKnown RBP14.49□□□□□ -0.09
CCSER1-202ENST00000502478 POTEMA6NI47 508 aa14.47□□□□□ -0.09
CCSER1-202ENST00000502478 LCE2DQ5TA82 110 aaPredicted RBP14.46□□□□□ -0.09
CCSER1-202ENST00000502478 POTEGQ6S5H5 508 aa14.44□□□□□ -0.1
CCSER1-202ENST00000502478 SLAIN1Q8ND83 568 aa14.44□□□□□ -0.1
CCSER1-202ENST00000502478 FAM163AQ96GL9 167 aaPredicted RBP14.42□□□□□ -0.1
CCSER1-202ENST00000502478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.42□□□□□ -0.1
CCSER1-202ENST00000502478 ILDR1Q86SU0 546 aaPredicted RBP14.41□□□□□ -0.1
CCSER1-202ENST00000502478 CABP2Q9NPB3 220 aa14.41□□□□□ -0.1
CCSER1-202ENST00000502478 RNF25Q96BH1 459 aaPredicted RBP14.36□□□□□ -0.11
CCSER1-202ENST00000502478 L3MBTL3Q96JM7 780 aaPredicted RBP14.36□□□□□ -0.11
CCSER1-202ENST00000502478 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.36□□□□□ -0.11
CCSER1-202ENST00000502478 RIOK3O14730 519 aaKnown RBP14.34□□□□□ -0.11
CCSER1-202ENST00000502478 C3orf67Q6ZVT6 689 aa14.3□□□□□ -0.12
CCSER1-202ENST00000502478 VGFO15240 615 aaPredicted RBP14.27□□□□□ -0.13
CCSER1-202ENST00000502478 DPY19L2Q6NUT2 758 aa14.27□□□□□ -0.13
CCSER1-202ENST00000502478 EFCAB3Q8N7B9 438 aa14.27□□□□□ -0.13
CCSER1-202ENST00000502478 PCDH10Q9P2E7 1040 aa14.25□□□□□ -0.13
CCSER1-202ENST00000502478 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.24□□□□□ -0.13
CCSER1-202ENST00000502478 ZFP91Q96JP5 570 aaPredicted RBP14.24□□□□□ -0.13
CCSER1-202ENST00000502478 ST18O60284 1047 aa14.23□□□□□ -0.13
CCSER1-202ENST00000502478 BOLA1Q9Y3E2 137 aa14.21□□□□□ -0.13
CCSER1-202ENST00000502478 SNPHO15079 494 aa14.2□□□□□ -0.14
CCSER1-202ENST00000502478 PLSCR2Q9NRY7 297 aa14.2□□□□□ -0.14
CCSER1-202ENST00000502478 G3V3G9 751 aa14.16□□□□□ -0.14
CCSER1-202ENST00000502478 SOX12O15370 315 aa14.16□□□□□ -0.14
CCSER1-202ENST00000502478 TAOK2Q9UL54 1235 aa14.15□□□□□ -0.14
CCSER1-202ENST00000502478 ECM2O94769 699 aaPredicted RBP14.14□□□□□ -0.15
CCSER1-202ENST00000502478 TMEM121BQ9BXQ6 578 aaPredicted RBP14.14□□□□□ -0.15
CCSER1-202ENST00000502478 PKD2Q13563 968 aa14.13□□□□□ -0.15
CCSER1-202ENST00000502478 MS4A4AQ96JQ5 239 aa14.09□□□□□ -0.15
CCSER1-202ENST00000502478 BCL11BQ9C0K0 894 aaPredicted RBP14.09□□□□□ -0.15
CCSER1-202ENST00000502478 PHF8Q9UPP1 1060 aa14.08□□□□□ -0.16
CCSER1-202ENST00000502478 CDAN1Q8IWY9 1227 aa14.05□□□□□ -0.16
CCSER1-202ENST00000502478 MICALL2Q8IY33 904 aa14.05□□□□□ -0.16
CCSER1-202ENST00000502478 RGL2O15211 777 aa14.04□□□□□ -0.16
CCSER1-202ENST00000502478 STK24Q9Y6E0 443 aa14.04□□□□□ -0.16
CCSER1-202ENST00000502478 STK25O00506 426 aa14.01□□□□□ -0.17
CCSER1-202ENST00000502478 NLRP6P59044 892 aa14□□□□□ -0.17
CCSER1-202ENST00000502478 FBXO22Q8NEZ5 403 aa14□□□□□ -0.17
CCSER1-202ENST00000502478 MARVELD3Q96A59 401 aa14□□□□□ -0.17
CCSER1-202ENST00000502478 HOXB3P14651 431 aaPredicted RBP13.98□□□□□ -0.17
CCSER1-202ENST00000502478 MFRPQ9BY79 579 aa13.96□□□□□ -0.17
CCSER1-202ENST00000502478 TMEM92Q6UXU6 159 aa13.95□□□□□ -0.18
CCSER1-202ENST00000502478 EMP3P54852 163 aa13.92□□□□□ -0.18
CCSER1-202ENST00000502478 DOK7Q18PE1 504 aa13.9□□□□□ -0.18
CCSER1-202ENST00000502478 ZNF710Q8N1W2 664 aa13.86□□□□□ -0.19
CCSER1-202ENST00000502478 HOXB1P14653 301 aaPredicted RBP13.85□□□□□ -0.19
CCSER1-202ENST00000502478 HS3ST6Q96QI5 342 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms