RNA–Protein interactions for RNA: ENST00000498690.1

LPGAT1-204, Transcript of lysophosphatidylglycerol acyltransferase 1, humanhuman

TSL 5

Gene LPGAT1, Length 300 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPGAT1-204ENST00000498690 SPRYD3Q8NCJ5 442 aa13.26□□□□□ -0.29
LPGAT1-204ENST00000498690 MNX1P50219 401 aaPredicted RBP13.24□□□□□ -0.29
LPGAT1-204ENST00000498690 FAM212AQ96EL1 285 aa13.21□□□□□ -0.29
LPGAT1-204ENST00000498690 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
LPGAT1-204ENST00000498690 RNF25Q96BH1 459 aaPredicted RBP13.2□□□□□ -0.3
LPGAT1-204ENST00000498690 HS6ST3Q8IZP7 471 aa13.17□□□□□ -0.3
LPGAT1-204ENST00000498690 RIOK3O14730 519 aaKnown RBP13.15□□□□□ -0.3
LPGAT1-204ENST00000498690 RASEFQ8IZ41 740 aa13.15□□□□□ -0.3
LPGAT1-204ENST00000498690 KDM2AQ9Y2K7 1162 aa13.15□□□□□ -0.3
LPGAT1-204ENST00000498690 TAOK2Q9UL54 1235 aa13.14□□□□□ -0.31
LPGAT1-204ENST00000498690 TSHZ2Q9NRE2 1034 aa13.13□□□□□ -0.31
LPGAT1-204ENST00000498690 BCANQ96GW7 911 aa13.11□□□□□ -0.31
LPGAT1-204ENST00000498690 CHRM1P11229 460 aaPredicted RBP13.1□□□□□ -0.31
LPGAT1-204ENST00000498690 DNAJC5Q9H3Z4 198 aa13.06□□□□□ -0.32
LPGAT1-204ENST00000498690 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
LPGAT1-204ENST00000498690 PYGBP11216 843 aa13.04□□□□□ -0.32
LPGAT1-204ENST00000498690 STK25O00506 426 aa13.03□□□□□ -0.32
LPGAT1-204ENST00000498690 CHADLQ6NUI6 762 aa13.03□□□□□ -0.32
LPGAT1-204ENST00000498690 NKX1-1Q15270 411 aaPredicted RBP12.99□□□□□ -0.33
LPGAT1-204ENST00000498690 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.96□□□□□ -0.33
LPGAT1-204ENST00000498690 ZFP91Q96JP5 570 aaPredicted RBP12.96□□□□□ -0.33
LPGAT1-204ENST00000498690 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
LPGAT1-204ENST00000498690 TSPYL2Q9H2G4 693 aaPredicted RBP12.96□□□□□ -0.33
LPGAT1-204ENST00000498690 FARP1Q9Y4F1 1045 aaPredicted RBP12.96□□□□□ -0.33
LPGAT1-204ENST00000498690 GTPBP6O43824 516 aaPredicted RBP12.94□□□□□ -0.34
LPGAT1-204ENST00000498690 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
LPGAT1-204ENST00000498690 BCL11BQ9C0K0 894 aaPredicted RBP12.94□□□□□ -0.34
LPGAT1-204ENST00000498690 STK24Q9Y6E0 443 aa12.94□□□□□ -0.34
LPGAT1-204ENST00000498690 SP7Q8TDD2 431 aaPredicted RBP12.93□□□□□ -0.34
LPGAT1-204ENST00000498690 PRKAR2AP13861 404 aaKnown RBP12.9□□□□□ -0.34
LPGAT1-204ENST00000498690 FXR2P51116 673 aaKnown RBP eCLIP12.84□□□□□ -0.35
LPGAT1-204ENST00000498690 ZNF467Q7Z7K2 595 aaPredicted RBP12.84□□□□□ -0.35
LPGAT1-204ENST00000498690 PRKCSHP14314 528 aaPredicted RBP12.83□□□□□ -0.36
LPGAT1-204ENST00000498690 RYDENQ9NUL5 291 aaKnown RBP12.82□□□□□ -0.36
LPGAT1-204ENST00000498690 PCDHB8Q9UN66 801 aa12.79□□□□□ -0.36
LPGAT1-204ENST00000498690 PCDHB13Q9Y5F0 798 aa12.79□□□□□ -0.36
LPGAT1-204ENST00000498690 CCDC61Q9Y6R9 512 aa12.79□□□□□ -0.36
LPGAT1-204ENST00000498690 PDAP1Q13442 181 aaKnown RBP12.77□□□□□ -0.37
LPGAT1-204ENST00000498690 PAK3O75914 559 aaPredicted RBP12.75□□□□□ -0.37
LPGAT1-204ENST00000498690 ZNF579Q8NAF0 562 aaKnown RBP12.73□□□□□ -0.37
LPGAT1-204ENST00000498690 PSEN1P49768 467 aa12.72□□□□□ -0.37
LPGAT1-204ENST00000498690 NBR1Q14596 966 aa12.72□□□□□ -0.37
LPGAT1-204ENST00000498690 TPRNQ4KMQ1 711 aa12.72□□□□□ -0.37
LPGAT1-204ENST00000498690 PIP4P2Q8N4L2 257 aa12.72□□□□□ -0.37
LPGAT1-204ENST00000498690 MAP3K13O43283 966 aa12.65□□□□□ -0.38
LPGAT1-204ENST00000498690 IFNL1Q8IU54 200 aa12.65□□□□□ -0.38
LPGAT1-204ENST00000498690 KIF12Q96FN5 646 aa12.64□□□□□ -0.39
LPGAT1-204ENST00000498690 MFRPQ9BY79 579 aa12.6□□□□□ -0.39
LPGAT1-204ENST00000498690 ZRANB1Q9UGI0 708 aa12.6□□□□□ -0.39
LPGAT1-204ENST00000498690 CD44P16070 742 aaKnown RBP12.56□□□□□ -0.4
LPGAT1-204ENST00000498690 CADPS2Q86UW7 1296 aa12.55□□□□□ -0.4
LPGAT1-204ENST00000498690 EFCAB3Q8N7B9 438 aa12.55□□□□□ -0.4
LPGAT1-204ENST00000498690 CABP2Q9NPB3 220 aa12.55□□□□□ -0.4
LPGAT1-204ENST00000498690 WDR70Q9NW82 654 aa12.54□□□□□ -0.4
LPGAT1-204ENST00000498690 SOX12O15370 315 aa12.51□□□□□ -0.41
LPGAT1-204ENST00000498690 NLRP6P59044 892 aa12.51□□□□□ -0.41
LPGAT1-204ENST00000498690 PHF12Q96QT6 1004 aa12.51□□□□□ -0.41
LPGAT1-204ENST00000498690 PPP1R37O75864 691 aa12.49□□□□□ -0.41
LPGAT1-204ENST00000498690 PHF8Q9UPP1 1060 aa12.49□□□□□ -0.41
LPGAT1-204ENST00000498690 P3H3Q8IVL6 736 aa12.48□□□□□ -0.41
LPGAT1-204ENST00000498690 FBXO22Q8NEZ5 403 aa12.48□□□□□ -0.41
LPGAT1-204ENST00000498690 HAX1O00165 279 aa12.43□□□□□ -0.42
LPGAT1-204ENST00000498690 GOLGA2Q08379 1002 aa12.4□□□□□ -0.42
LPGAT1-204ENST00000498690 KCNV2Q8TDN2 545 aa12.4□□□□□ -0.42
LPGAT1-204ENST00000498690 TMEM106CQ9BVX2 250 aa12.4□□□□□ -0.42
LPGAT1-204ENST00000498690 C19orf67A6NJJ6 358 aa12.38□□□□□ -0.43
LPGAT1-204ENST00000498690 MS4A3Q96HJ5 214 aa12.38□□□□□ -0.43
LPGAT1-204ENST00000498690 TRPC6Q9Y210 931 aa12.36□□□□□ -0.43
LPGAT1-204ENST00000498690 MS4A4AQ96JQ5 239 aa12.35□□□□□ -0.43
LPGAT1-204ENST00000498690 MKRN3Q13064 507 aaKnown RBP12.33□□□□□ -0.44
LPGAT1-204ENST00000498690 E2F4Q16254 413 aa12.31□□□□□ -0.44
LPGAT1-204ENST00000498690 PDE4AP27815 886 aa12.29□□□□□ -0.44
LPGAT1-204ENST00000498690 ARHGEF1Q92888 912 aaKnown RBP12.28□□□□□ -0.44
LPGAT1-204ENST00000498690 LARP6Q9BRS8 491 aaKnown RBP12.27□□□□□ -0.45
LPGAT1-204ENST00000498690 NCKAP5LQ9HCH0 1330 aa12.27□□□□□ -0.45
LPGAT1-204ENST00000498690 TIE1P35590 1138 aa12.26□□□□□ -0.45
LPGAT1-204ENST00000498690 EVX2Q03828 476 aa12.26□□□□□ -0.45
LPGAT1-204ENST00000498690 TTLL13PA6NNM8 815 aa12.24□□□□□ -0.45
LPGAT1-204ENST00000498690 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.24□□□□□ -0.45
LPGAT1-204ENST00000498690 LMOD2Q6P5Q4 547 aa12.22□□□□□ -0.45
LPGAT1-204ENST00000498690 CRISPLD2Q9H0B8 497 aa12.21□□□□□ -0.45
LPGAT1-204ENST00000498690 BMP2KQ9NSY1 1161 aaPredicted RBP12.21□□□□□ -0.45
LPGAT1-204ENST00000498690 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.21□□□□□ -0.451e-8■□□□□ 8.1
LPGAT1-204ENST00000498690 TULP1O00294 542 aaPredicted RBP12.2□□□□□ -0.46
LPGAT1-204ENST00000498690 MFSD10Q14728 455 aa12.2□□□□□ -0.46
LPGAT1-204ENST00000498690 GALR2O43603 387 aaPredicted RBP12.19□□□□□ -0.46
LPGAT1-204ENST00000498690 DDX27Q96GQ7 796 aaKnown RBP12.19□□□□□ -0.46
LPGAT1-204ENST00000498690 TRIM35Q9UPQ4 493 aa12.17□□□□□ -0.46
LPGAT1-204ENST00000498690 SEMA3EO15041 775 aa12.16□□□□□ -0.46
LPGAT1-204ENST00000498690 ILDR1Q86SU0 546 aaPredicted RBP12.16□□□□□ -0.46
LPGAT1-204ENST00000498690 TESPA1A2RU30 521 aaPredicted RBP12.12□□□□□ -0.47
LPGAT1-204ENST00000498690 CLCN6P51797 869 aa12.11□□□□□ -0.47
LPGAT1-204ENST00000498690 LHX8Q68G74 356 aa12.11□□□□□ -0.47
LPGAT1-204ENST00000498690 DPY19L2Q6NUT2 758 aa12.11□□□□□ -0.47
LPGAT1-204ENST00000498690 CAMK2BQ13554 666 aa12.09□□□□□ -0.47
LPGAT1-204ENST00000498690 ARIH1Q9Y4X5 557 aaPredicted RBP12.09□□□□□ -0.47
LPGAT1-204ENST00000498690 GPHNQ9NQX3 736 aaPredicted RBP12.08□□□□□ -0.48
LPGAT1-204ENST00000498690 ATN1P54259 1190 aaPredicted RBP12.07□□□□□ -0.48
LPGAT1-204ENST00000498690 PPP1R15BQ5SWA1 713 aa12.06□□□□□ -0.48
LPGAT1-204ENST00000498690 SMYD5Q6GMV2 418 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms