RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 NKX1-1Q15270 411 aaPredicted RBP16.59■□□□□ 0.25
SNX13-212ENST00000498463 GSE1Q14687 1217 aa16.54■□□□□ 0.24
SNX13-212ENST00000498463 GTF3C3Q9Y5Q9 886 aa16.54■□□□□ 0.24
SNX13-212ENST00000498463 GTPBP6O43824 516 aaPredicted RBP16.52■□□□□ 0.24
SNX13-212ENST00000498463 RIOK3O14730 519 aaKnown RBP16.49■□□□□ 0.23
SNX13-212ENST00000498463 NUBP1P53384 320 aa16.42■□□□□ 0.22
SNX13-212ENST00000498463 STK25O00506 426 aa16.39■□□□□ 0.21
SNX13-212ENST00000498463 ERICH6Q7L0X2 663 aa16.38■□□□□ 0.21
SNX13-212ENST00000498463 TMEM132AQ24JP5 1023 aa16.35■□□□□ 0.21
SNX13-212ENST00000498463 DCAF8Q5TAQ9 597 aa16.35■□□□□ 0.21
SNX13-212ENST00000498463 VGFO15240 615 aaPredicted RBP16.34■□□□□ 0.21
SNX13-212ENST00000498463 ARXQ96QS3 562 aa16.29■□□□□ 0.2
SNX13-212ENST00000498463 FAM212AQ96EL1 285 aa16.25■□□□□ 0.19
SNX13-212ENST00000498463 RYDENQ9NUL5 291 aaKnown RBP16.25■□□□□ 0.19
SNX13-212ENST00000498463 P3H3Q8IVL6 736 aa16.23■□□□□ 0.19
SNX13-212ENST00000498463 BCL11BQ9C0K0 894 aaPredicted RBP16.22■□□□□ 0.19
SNX13-212ENST00000498463 SGIP1Q9BQI5 828 aa16.21■□□□□ 0.19
SNX13-212ENST00000498463 STK24Q9Y6E0 443 aa16.21■□□□□ 0.19
SNX13-212ENST00000498463 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.19■□□□□ 0.18
SNX13-212ENST00000498463 CHRM1P11229 460 aaPredicted RBP16.19■□□□□ 0.18
SNX13-212ENST00000498463 ZFP91Q96JP5 570 aaPredicted RBP16.19■□□□□ 0.18
SNX13-212ENST00000498463 C14orf37Q86TY3 774 aa16.1■□□□□ 0.17
SNX13-212ENST00000498463 MNX1P50219 401 aaPredicted RBP16.09■□□□□ 0.17
SNX13-212ENST00000498463 LMOD2Q6P5Q4 547 aa16.08■□□□□ 0.16
SNX13-212ENST00000498463 RASEFQ8IZ41 740 aa16.08■□□□□ 0.16
SNX13-212ENST00000498463 KCNV2Q8TDN2 545 aa16.08■□□□□ 0.16
SNX13-212ENST00000498463 CREBZFQ9NS37 354 aa16.08■□□□□ 0.16
SNX13-212ENST00000498463 DAXXQ9UER7 740 aaPredicted RBP16.08■□□□□ 0.16
SNX13-212ENST00000498463 SPDYE1Q8NFV5 336 aaPredicted RBP16.06■□□□□ 0.16
SNX13-212ENST00000498463 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.05■□□□□ 0.16
SNX13-212ENST00000498463 WDR70Q9NW82 654 aa16.01■□□□□ 0.15
SNX13-212ENST00000498463 PYGBP11216 843 aa16■□□□□ 0.15
SNX13-212ENST00000498463 CADPS2Q86UW7 1296 aa16■□□□□ 0.15
SNX13-212ENST00000498463 HOMEZQ8IX15 550 aa15.96■□□□□ 0.15
SNX13-212ENST00000498463 BRPF1P55201 1214 aaPredicted RBP15.95■□□□□ 0.14
SNX13-212ENST00000498463 PRR29P0C7W0 189 aa15.94■□□□□ 0.14
SNX13-212ENST00000498463 CLEC11AQ9Y240 323 aa15.92■□□□□ 0.14
SNX13-212ENST00000498463 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
SNX13-212ENST00000498463 ZC3H15Q8WU90 426 aaKnown RBP15.81■□□□□ 0.12
SNX13-212ENST00000498463 ZNF467Q7Z7K2 595 aaPredicted RBP15.78■□□□□ 0.12
SNX13-212ENST00000498463 ARHGEF1Q92888 912 aaKnown RBP15.78■□□□□ 0.12
SNX13-212ENST00000498463 NEUROD2Q15784 382 aa15.77■□□□□ 0.12
SNX13-212ENST00000498463 PDAP1Q13442 181 aaKnown RBP15.75■□□□□ 0.11
SNX13-212ENST00000498463 RBM42Q9BTD8 480 aaKnown RBP15.75■□□□□ 0.11
SNX13-212ENST00000498463 MFRPQ9BY79 579 aa15.73■□□□□ 0.11
SNX13-212ENST00000498463 REM2Q8IYK8 340 aaPredicted RBP15.71■□□□□ 0.11
SNX13-212ENST00000498463 SLC24A3Q9HC58 644 aa15.7■□□□□ 0.1
SNX13-212ENST00000498463 TESPA1A2RU30 521 aaPredicted RBP15.68■□□□□ 0.1
SNX13-212ENST00000498463 E2F4Q16254 413 aa15.68■□□□□ 0.1
SNX13-212ENST00000498463 SEMA3EO15041 775 aa15.67■□□□□ 0.1
SNX13-212ENST00000498463 POTEDQ86YR6 584 aa15.66■□□□□ 0.1
SNX13-212ENST00000498463 SUPT5HO00267 1087 aaKnown RBP15.64■□□□□ 0.09
SNX13-212ENST00000498463 PCDHB8Q9UN66 801 aa15.64■□□□□ 0.09
SNX13-212ENST00000498463 PCDHB13Q9Y5F0 798 aa15.64■□□□□ 0.09
SNX13-212ENST00000498463 TSPYL2Q9H2G4 693 aaPredicted RBP15.62■□□□□ 0.09
SNX13-212ENST00000498463 PPP1R37O75864 691 aa15.61■□□□□ 0.09
SNX13-212ENST00000498463 PSEN1P49768 467 aa15.6■□□□□ 0.09
SNX13-212ENST00000498463 CACNB1Q02641 598 aaPredicted RBP15.58■□□□□ 0.08
SNX13-212ENST00000498463 ZMYND10O75800 440 aa15.56■□□□□ 0.08
SNX13-212ENST00000498463 PITPNM1O00562 1244 aa15.54■□□□□ 0.08
SNX13-212ENST00000498463 ZNF579Q8NAF0 562 aaKnown RBP15.53■□□□□ 0.08
SNX13-212ENST00000498463 FBXO22Q8NEZ5 403 aa15.53■□□□□ 0.08
SNX13-212ENST00000498463 NLRP6P59044 892 aa15.5■□□□□ 0.07
SNX13-212ENST00000498463 SMYD5Q6GMV2 418 aa15.49■□□□□ 0.07
SNX13-212ENST00000498463 EFCAB3Q8N7B9 438 aa15.47■□□□□ 0.07
SNX13-212ENST00000498463 NCKAP5LQ9HCH0 1330 aa15.46■□□□□ 0.07
SNX13-212ENST00000498463 CCDC61Q9Y6R9 512 aa15.46■□□□□ 0.07
SNX13-212ENST00000498463 PHF8Q9UPP1 1060 aa15.45■□□□□ 0.06
SNX13-212ENST00000498463 BARGINQ6ZT62 677 aa15.44■□□□□ 0.06
SNX13-212ENST00000498463 SOX12O15370 315 aa15.43■□□□□ 0.06
SNX13-212ENST00000498463 CHADLQ6NUI6 762 aa15.43■□□□□ 0.06
SNX13-212ENST00000498463 LARP6Q9BRS8 491 aaKnown RBP15.41■□□□□ 0.06
SNX13-212ENST00000498463 CABP2Q9NPB3 220 aa15.41■□□□□ 0.06
SNX13-212ENST00000498463 FARP1Q9Y4F1 1045 aaPredicted RBP15.4■□□□□ 0.06
SNX13-212ENST00000498463 MFSD10Q14728 455 aa15.39■□□□□ 0.05
SNX13-212ENST00000498463 ARIH1Q9Y4X5 557 aaPredicted RBP15.39■□□□□ 0.05
SNX13-212ENST00000498463 IFNL1Q8IU54 200 aa15.37■□□□□ 0.05
SNX13-212ENST00000498463 PDE4AP27815 886 aa15.35■□□□□ 0.05
SNX13-212ENST00000498463 AK7Q96M32 723 aa15.35■□□□□ 0.05
SNX13-212ENST00000498463 GPBP1L1Q9HC44 474 aaPredicted RBP15.35■□□□□ 0.05
SNX13-212ENST00000498463 CRISPLD2Q9H0B8 497 aa15.33■□□□□ 0.04
SNX13-212ENST00000498463 DDX27Q96GQ7 796 aaKnown RBP15.32■□□□□ 0.04
SNX13-212ENST00000498463 CAMK2BQ13554 666 aa15.29■□□□□ 0.04
SNX13-212ENST00000498463 GPIHBP1Q8IV16 184 aa15.29■□□□□ 0.04
SNX13-212ENST00000498463 RBM26Q5T8P6 1007 aaKnown RBP15.28■□□□□ 0.04
SNX13-212ENST00000498463 IL27Q8NEV9 243 aa15.26■□□□□ 0.03
SNX13-212ENST00000498463 MS4A4AQ96JQ5 239 aa15.26■□□□□ 0.03
SNX13-212ENST00000498463 KDM4CQ9H3R0 1056 aa15.26■□□□□ 0.03
SNX13-212ENST00000498463 UBTFP17480 764 aaKnown RBP15.25■□□□□ 0.03
SNX13-212ENST00000498463 PODXL2Q9NZ53 605 aa15.25■□□□□ 0.03
SNX13-212ENST00000498463 MAP3K13O43283 966 aa15.24■□□□□ 0.03
SNX13-212ENST00000498463 KRI1Q8N9T8 703 aaKnown RBP15.24■□□□□ 0.03
SNX13-212ENST00000498463 ZMYND15Q9H091 742 aa15.24■□□□□ 0.03
SNX13-212ENST00000498463 MLLT3P42568 568 aaPredicted RBP15.23■□□□□ 0.03
SNX13-212ENST00000498463 KIF12Q96FN5 646 aa15.21■□□□□ 0.03
SNX13-212ENST00000498463 RSPH6AQ9H0K4 717 aa15.21■□□□□ 0.03
SNX13-212ENST00000498463 PAK3O75914 559 aaPredicted RBP15.19■□□□□ 0.02
SNX13-212ENST00000498463 TRIM66O15016 1216 aa15.17■□□□□ 0.02
SNX13-212ENST00000498463 PDE4DQ08499 809 aa15.16■□□□□ 0.02
SNX13-212ENST00000498463 PRKAR2AP13861 404 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms