RNA–Protein interactions for RNA: ENST00000498426.5

KCNT2-205, Transcript of potassium sodium-activated channel subfamily T member 2, human

TSL 5

Gene KCNT2, Length 5,157 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNT2-205	ENST00000498426	BECN1	Q14457	450 aa		4.41	□□□□□ -1.7
KCNT2-205	ENST00000498426	HSP90AA2P	Q14568	343 aa	Predicted RBP	4.41	□□□□□ -1.7
KCNT2-205	ENST00000498426	FKBP8	Q14318	412 aa		4.4	□□□□□ -1.7
KCNT2-205	ENST00000498426	UBE2Q2	Q8WVN8	375 aa		4.4	□□□□□ -1.7
KCNT2-205	ENST00000498426	NBR1	Q14596	966 aa		4.4	□□□□□ -1.71
KCNT2-205	ENST00000498426	ARX	Q96QS3	562 aa		4.39	□□□□□ -1.71
KCNT2-205	ENST00000498426	MAP7D2	Q96T17	732 aa		4.39	□□□□□ -1.71
KCNT2-205	ENST00000498426	MTERF4	Q7Z6M4	381 aa	Known RBP	4.39	□□□□□ -1.71
KCNT2-205	ENST00000498426	TNNT3	P45378	269 aa	Predicted RBP	4.38	□□□□□ -1.71
KCNT2-205	ENST00000498426	GOLGA6L22	H0YM25	854 aa		4.38	□□□□□ -1.71
KCNT2-205	ENST00000498426	VSIG10	Q8N0Z9	540 aa		4.38	□□□□□ -1.71
KCNT2-205	ENST00000498426	PNN	Q9H307	717 aa	Known RBP	4.38	□□□□□ -1.71
KCNT2-205	ENST00000498426	GOLGA6L3	A6NEY3	463 aa		4.37	□□□□□ -1.71
KCNT2-205	ENST00000498426		U3KPZ7	1027 aa	Predicted RBP	4.36	□□□□□ -1.71
KCNT2-205	ENST00000498426	CCDC180	Q9P1Z9	1646 aa		4.36	□□□□□ -1.71
KCNT2-205	ENST00000498426	CHAF1A	Q13111	956 aa	Predicted RBP	4.36	□□□□□ -1.71
KCNT2-205	ENST00000498426	TAF3	Q5VWG9	929 aa		4.36	□□□□□ -1.71
KCNT2-205	ENST00000498426	GOLGA6L6	A8MZA4	724 aa		4.35	□□□□□ -1.71
KCNT2-205	ENST00000498426	APP	P05067	770 aa		4.35	□□□□□ -1.71
KCNT2-205	ENST00000498426	PDE4C	Q08493	712 aa		4.35	□□□□□ -1.71
KCNT2-205	ENST00000498426	SHROOM4	Q9ULL8	1493 aa		4.34	□□□□□ -1.71
KCNT2-205	ENST00000498426	CANX	P27824	592 aa	Known RBP	4.34	□□□□□ -1.71
KCNT2-205	ENST00000498426	MSN	P26038	577 aa	Known RBP	4.34	□□□□□ -1.71
KCNT2-205	ENST00000498426	NPM2	Q86SE8	214 aa	Known RBP	4.33	□□□□□ -1.72
KCNT2-205	ENST00000498426	CCDC136	Q96JN2	1154 aa		4.33	□□□□□ -1.72
KCNT2-205	ENST00000498426	PTMA	P06454	111 aa	Known RBP	4.33	□□□□□ -1.72
KCNT2-205	ENST00000498426	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	4.32	□□□□□ -1.72
KCNT2-205	ENST00000498426	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	4.32	□□□□□ -1.72
KCNT2-205	ENST00000498426	GOLGA6L1	Q8N7Z2	621 aa		4.32	□□□□□ -1.72
KCNT2-205	ENST00000498426	FANCI	Q9NVI1	1328 aa		4.32	□□□□□ -1.72
KCNT2-205	ENST00000498426	SET	Q01105	290 aa	Predicted RBP	4.32	□□□□□ -1.72
KCNT2-205	ENST00000498426	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.32	□□□□□ -1.72
KCNT2-205	ENST00000498426	TAF7L	Q5H9L4	462 aa		4.32	□□□□□ -1.72
KCNT2-205	ENST00000498426	PPP4R2	Q9NY27	417 aa		4.32	□□□□□ -1.72
KCNT2-205	ENST00000498426	RRP9	O43818	475 aa	Known RBP	4.31	□□□□□ -1.72
KCNT2-205	ENST00000498426	SUPT16H	Q9Y5B9	1047 aa	Known RBP	4.31	□□□□□ -1.72
KCNT2-205	ENST00000498426	MYCN	P04198	464 aa	Predicted RBP	4.31	□□□□□ -1.72
KCNT2-205	ENST00000498426	TSPYL1	Q9H0U9	437 aa		4.31	□□□□□ -1.72
KCNT2-205	ENST00000498426	RBM19	Q9Y4C8	960 aa	Known RBP	4.31	□□□□□ -1.72
KCNT2-205	ENST00000498426	NRDC	O43847	1150 aa		4.3	□□□□□ -1.72
KCNT2-205	ENST00000498426	UBTF	P17480	764 aa	Known RBP	4.3	□□□□□ -1.72
KCNT2-205	ENST00000498426	TPM2	P07951	284 aa		4.3	□□□□□ -1.72
KCNT2-205	ENST00000498426	RTN4	Q9NQC3	1192 aa	Known RBP	4.3	□□□□□ -1.72
KCNT2-205	ENST00000498426	CCDC66	A2RUB6	948 aa		4.29	□□□□□ -1.72
KCNT2-205	ENST00000498426	HSP90B1	P14625	803 aa	Known RBP	4.29	□□□□□ -1.72
KCNT2-205	ENST00000498426	NOM1	Q5C9Z4	860 aa	Known RBP	4.28	□□□□□ -1.72
KCNT2-205	ENST00000498426	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	4.28	□□□□□ -1.72
KCNT2-205	ENST00000498426	PDIA4	P13667	645 aa	Known RBP	4.28	□□□□□ -1.72
KCNT2-205	ENST00000498426	AMER1	Q5JTC6	1135 aa	Predicted RBP	4.28	□□□□□ -1.72
KCNT2-205	ENST00000498426	TSHZ2	Q9NRE2	1034 aa		4.28	□□□□□ -1.72
KCNT2-205	ENST00000498426	ATXN8OS	P0DMR3	200 aa		4.27	□□□□□ -1.73
KCNT2-205	ENST00000498426	CSPP1	Q1MSJ5	1256 aa		4.27	□□□□□ -1.73
KCNT2-205	ENST00000498426	FAM43A	Q8N2R8	423 aa		4.26	□□□□□ -1.73
KCNT2-205	ENST00000498426	ATP1B4	Q9UN42	357 aa	Predicted RBP	4.26	□□□□□ -1.73
KCNT2-205	ENST00000498426	KIAA2012	Q0VF49	1180 aa		4.26	□□□□□ -1.73
KCNT2-205	ENST00000498426	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	4.26	□□□□□ -1.73
KCNT2-205	ENST00000498426	CFAP44	Q96MT7	982 aa		4.26	□□□□□ -1.73
KCNT2-205	ENST00000498426	C14orf37	Q86TY3	774 aa		4.26	□□□□□ -1.73
KCNT2-205	ENST00000498426	IPO9	Q96P70	1041 aa	Known RBP	4.25	□□□□□ -1.73
KCNT2-205	ENST00000498426	TCERG1	O14776	1098 aa	Known RBP	4.25	□□□□□ -1.73
KCNT2-205	ENST00000498426	HNRNPU	Q00839	825 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
KCNT2-205	ENST00000498426	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.24	□□□□□ -1.73
KCNT2-205	ENST00000498426	GSE1	Q14687	1217 aa		4.24	□□□□□ -1.73
KCNT2-205	ENST00000498426	CWC15	Q9P013	229 aa	Known RBP	4.24	□□□□□ -1.73
KCNT2-205	ENST00000498426	GPS2	Q13227	327 aa		4.24	□□□□□ -1.73
KCNT2-205	ENST00000498426	HNRNPUL2	Q1KMD3	747 aa	Known RBP	4.24	□□□□□ -1.73
KCNT2-205	ENST00000498426	TEX35	Q5T0J7	233 aa		4.24	□□□□□ -1.73
KCNT2-205	ENST00000498426	HTATSF1	O43719	755 aa	Known RBP	4.23	□□□□□ -1.73
KCNT2-205	ENST00000498426	RNF39	Q9H2S5	420 aa		4.23	□□□□□ -1.73
KCNT2-205	ENST00000498426	NEFH	P12036	1026 aa		4.23	□□□□□ -1.73
KCNT2-205	ENST00000498426	BRD2	P25440	801 aa	Known RBP	4.23	□□□□□ -1.73
KCNT2-205	ENST00000498426	MKRN4P	Q13434	485 aa	Predicted RBP	4.23	□□□□□ -1.73
KCNT2-205	ENST00000498426	GBP4	Q96PP9	640 aa		4.23	□□□□□ -1.73
KCNT2-205	ENST00000498426	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.22	□□□□□ -1.73
KCNT2-205	ENST00000498426	MIER1	Q8N108	512 aa		4.22	□□□□□ -1.73
KCNT2-205	ENST00000498426	ISY1	Q9ULR0	285 aa	Known RBP	4.22	□□□□□ -1.73
KCNT2-205	ENST00000498426	MYH16	Q9H6N6	1097 aa		4.22	□□□□□ -1.73
KCNT2-205	ENST00000498426	CCER2	I3L3R5	266 aa		4.21	□□□□□ -1.73
KCNT2-205	ENST00000498426	USP8	P40818	1118 aa		4.21	□□□□□ -1.73
KCNT2-205	ENST00000498426	ANO8	Q9HCE9	1232 aa	Predicted RBP	4.21	□□□□□ -1.73
KCNT2-205	ENST00000498426	CCDC9	Q9Y3X0	531 aa	Known RBP	4.21	□□□□□ -1.73
KCNT2-205	ENST00000498426	SSR1	P43307	286 aa	Known RBP	4.21	□□□□□ -1.74
KCNT2-205	ENST00000498426	SKOR2	Q2VWA4	1001 aa	Predicted RBP	4.21	□□□□□ -1.74
KCNT2-205	ENST00000498426	STK11IP	Q8N1F8	1099 aa		4.21	□□□□□ -1.74
KCNT2-205	ENST00000498426	SYAP1	Q96A49	352 aa	Predicted RBP	4.21	□□□□□ -1.74
KCNT2-205	ENST00000498426	ARID3A	Q99856	593 aa		4.21	□□□□□ -1.74
KCNT2-205	ENST00000498426	FBXO3	Q9UK99	471 aa		4.21	□□□□□ -1.74
KCNT2-205	ENST00000498426	CLGN	O14967	610 aa		4.2	□□□□□ -1.74
KCNT2-205	ENST00000498426	EEA1	Q15075	1411 aa		4.2	□□□□□ -1.74
KCNT2-205	ENST00000498426	DDX11L8	A8MPP1	907 aa		4.2	□□□□□ -1.74
KCNT2-205	ENST00000498426	KLHL34	Q8N239	644 aa		4.2	□□□□□ -1.74
KCNT2-205	ENST00000498426	SPINK5	Q9NQ38	1064 aa	Predicted RBP	4.2	□□□□□ -1.74
KCNT2-205	ENST00000498426	RBM28	Q9NW13	759 aa	Known RBP	4.2	□□□□□ -1.74
KCNT2-205	ENST00000498426	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.19	□□□□□ -1.74
KCNT2-205	ENST00000498426	ZRSR1	Q15695	479 aa	Known RBP	4.19	□□□□□ -1.74
KCNT2-205	ENST00000498426	CC2D1B	Q5T0F9	858 aa	Known RBP	4.19	□□□□□ -1.74
KCNT2-205	ENST00000498426	LOC105371045	A0A1W2PR82	267 aa		4.19	□□□□□ -1.74
KCNT2-205	ENST00000498426	GOLGA6L4	A6NEF3	574 aa		4.19	□□□□□ -1.74
KCNT2-205	ENST00000498426	HMGN5	P82970	282 aa	Known RBP	4.19	□□□□□ -1.74
KCNT2-205	ENST00000498426	PDCL3	Q9H2J4	239 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms