RNA–Protein interactions for RNA: ENST00000498039.5

RNF6-207, Transcript of ring finger protein 6, humanhuman

TSL 3

Gene RNF6, Length 855 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6-207ENST00000498039 MS4A3Q96HJ5 214 aa12.02□□□□□ -0.49
RNF6-207ENST00000498039 FBXO3Q9UK99 471 aa12□□□□□ -0.49
RNF6-207ENST00000498039 CCDC61Q9Y6R9 512 aa12□□□□□ -0.49
RNF6-207ENST00000498039 KIF12Q96FN5 646 aa11.94□□□□□ -0.5
RNF6-207ENST00000498039 NUBP1P53384 320 aa11.91□□□□□ -0.5
RNF6-207ENST00000498039 MAP3K13O43283 966 aa11.9□□□□□ -0.5
RNF6-207ENST00000498039 PELP1Q8IZL8 1130 aaKnown RBP11.88□□□□□ -0.51
RNF6-207ENST00000498039 FAM212AQ96EL1 285 aa11.88□□□□□ -0.51
RNF6-207ENST00000498039 ATMINO43313 823 aaPredicted RBP11.86□□□□□ -0.51
RNF6-207ENST00000498039 ASTLQ6HA08 431 aaPredicted RBP11.86□□□□□ -0.51
RNF6-207ENST00000498039 VASPP50552 380 aaPredicted RBP11.85□□□□□ -0.51
RNF6-207ENST00000498039 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
RNF6-207ENST00000498039 TRPC6Q9Y210 931 aa11.83□□□□□ -0.52
RNF6-207ENST00000498039 DCAF8Q5TAQ9 597 aa11.82□□□□□ -0.52
RNF6-207ENST00000498039 METRNQ9UJH8 293 aa11.81□□□□□ -0.52
RNF6-207ENST00000498039 PCDHB13Q9Y5F0 798 aa11.81□□□□□ -0.52
RNF6-207ENST00000498039 ATN1P54259 1190 aaPredicted RBP11.8□□□□□ -0.52
RNF6-207ENST00000498039 SLC39A7Q92504 469 aa11.8□□□□□ -0.52
RNF6-207ENST00000498039 BMP2KQ9NSY1 1161 aaPredicted RBP11.79□□□□□ -0.52
RNF6-207ENST00000498039 C7P10643 843 aa11.77□□□□□ -0.53
RNF6-207ENST00000498039 POTEB2H3BUK9 544 aa11.76□□□□□ -0.53
RNF6-207ENST00000498039 TIE1P35590 1138 aa11.76□□□□□ -0.53
RNF6-207ENST00000498039 SGIP1Q9BQI5 828 aa11.75□□□□□ -0.53
RNF6-207ENST00000498039 PYGBP11216 843 aa11.73□□□□□ -0.53
RNF6-207ENST00000498039 TTLL13PA6NNM8 815 aa11.72□□□□□ -0.53
RNF6-207ENST00000498039 IFNL1Q8IU54 200 aa11.72□□□□□ -0.53
RNF6-207ENST00000498039 OTUD5Q96G74 571 aa11.7□□□□□ -0.54
RNF6-207ENST00000498039 GSE1Q14687 1217 aa11.66□□□□□ -0.54
RNF6-207ENST00000498039 TRIM35Q9UPQ4 493 aa11.66□□□□□ -0.54
RNF6-207ENST00000498039 TMEM106CQ9BVX2 250 aa11.65□□□□□ -0.54
RNF6-207ENST00000498039 SEC24BO95487 1268 aa11.64□□□□□ -0.55
RNF6-207ENST00000498039 IFNLR1Q8IU57 520 aaPredicted RBP11.63□□□□□ -0.55
RNF6-207ENST00000498039 PCDHB8Q9UN66 801 aa11.62□□□□□ -0.55
RNF6-207ENST00000498039 POTEJP0CG39 1038 aa11.61□□□□□ -0.55
RNF6-207ENST00000498039 POTEFA5A3E0 1075 aa11.6□□□□□ -0.55
RNF6-207ENST00000498039 SPOCK2Q92563 424 aa11.6□□□□□ -0.55
RNF6-207ENST00000498039 MAMSTRQ6ZN01 415 aa11.59□□□□□ -0.55
RNF6-207ENST00000498039 COLQQ9Y215 455 aaPredicted RBP11.59□□□□□ -0.55
RNF6-207ENST00000498039 CIZ1Q9ULV3 898 aaPredicted RBP11.58□□□□□ -0.56
RNF6-207ENST00000498039 IER5LQ5T953 404 aa11.57□□□□□ -0.56
RNF6-207ENST00000498039 SCUBE2Q9NQ36 999 aa11.57□□□□□ -0.56
RNF6-207ENST00000498039 ZNF467Q7Z7K2 595 aaPredicted RBP11.53□□□□□ -0.56
RNF6-207ENST00000498039 PLCG2P16885 1265 aa11.51□□□□□ -0.57
RNF6-207ENST00000498039 CHRM1P11229 460 aaPredicted RBP11.49□□□□□ -0.57
RNF6-207ENST00000498039 GOLGA2Q08379 1002 aa11.46□□□□□ -0.57
RNF6-207ENST00000498039 PSEN1P49768 467 aa11.44□□□□□ -0.58
RNF6-207ENST00000498039 IRX5P78411 483 aaPredicted RBP11.44□□□□□ -0.58
RNF6-207ENST00000498039 OCEL1Q9H607 264 aa11.42□□□□□ -0.58
RNF6-207ENST00000498039 MKRN3Q13064 507 aaKnown RBP11.4□□□□□ -0.58
RNF6-207ENST00000498039 PDAP1Q13442 181 aaKnown RBP11.4□□□□□ -0.58
RNF6-207ENST00000498039 FAM163AQ96GL9 167 aaPredicted RBP11.39□□□□□ -0.59
RNF6-207ENST00000498039 POTEMA6NI47 508 aa11.36□□□□□ -0.59
RNF6-207ENST00000498039 SLAIN1Q8ND83 568 aa11.36□□□□□ -0.59
RNF6-207ENST00000498039 POTEGQ6S5H5 508 aa11.34□□□□□ -0.59
RNF6-207ENST00000498039 TRIM41Q8WV44 630 aa11.34□□□□□ -0.59
RNF6-207ENST00000498039 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.6
RNF6-207ENST00000498039 CABP2Q9NPB3 220 aa11.32□□□□□ -0.6
RNF6-207ENST00000498039 PDCD7Q8N8D1 485 aaKnown RBP11.3□□□□□ -0.6
RNF6-207ENST00000498039 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.28□□□□□ -0.6
RNF6-207ENST00000498039 LCE2DQ5TA82 110 aaPredicted RBP11.26□□□□□ -0.61
RNF6-207ENST00000498039 PLSCR2Q9NRY7 297 aa11.26□□□□□ -0.61
RNF6-207ENST00000498039 C3orf67Q6ZVT6 689 aa11.25□□□□□ -0.61
RNF6-207ENST00000498039 L3MBTL3Q96JM7 780 aaPredicted RBP11.25□□□□□ -0.61
RNF6-207ENST00000498039 RIOK3O14730 519 aaKnown RBP11.22□□□□□ -0.61
RNF6-207ENST00000498039 RTN4Q9NQC3 1192 aaKnown RBP11.21□□□□□ -0.61
RNF6-207ENST00000498039 DPY19L2Q6NUT2 758 aa11.2□□□□□ -0.62
RNF6-207ENST00000498039 G3V3G9 751 aa11.19□□□□□ -0.62
RNF6-207ENST00000498039 RNF25Q96BH1 459 aaPredicted RBP11.19□□□□□ -0.62
RNF6-207ENST00000498039 EFCAB3Q8N7B9 438 aa11.18□□□□□ -0.62
RNF6-207ENST00000498039 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.16□□□□□ -0.62
RNF6-207ENST00000498039 ILDR1Q86SU0 546 aaPredicted RBP11.16□□□□□ -0.62
RNF6-207ENST00000498039 ZFP91Q96JP5 570 aaPredicted RBP11.16□□□□□ -0.62
RNF6-207ENST00000498039 VGFO15240 615 aaPredicted RBP11.15□□□□□ -0.62
RNF6-207ENST00000498039 ST18O60284 1047 aa11.15□□□□□ -0.62
RNF6-207ENST00000498039 SNPHO15079 494 aa11.14□□□□□ -0.63
RNF6-207ENST00000498039 AMER1Q5JTC6 1135 aaPredicted RBP11.14□□□□□ -0.63
RNF6-207ENST00000498039 BOLA1Q9Y3E2 137 aa11.13□□□□□ -0.63
RNF6-207ENST00000498039 PCDH10Q9P2E7 1040 aa11.12□□□□□ -0.63
RNF6-207ENST00000498039 ECM2O94769 699 aaPredicted RBP11.1□□□□□ -0.63
RNF6-207ENST00000498039 TAOK2Q9UL54 1235 aa11.08□□□□□ -0.64
RNF6-207ENST00000498039 SOX12O15370 315 aa11.05□□□□□ -0.64
RNF6-207ENST00000498039 BCL11BQ9C0K0 894 aaPredicted RBP11.05□□□□□ -0.64
RNF6-207ENST00000498039 TMEM121BQ9BXQ6 578 aaPredicted RBP11.04□□□□□ -0.64
RNF6-207ENST00000498039 PHF8Q9UPP1 1060 aa11.04□□□□□ -0.64
RNF6-207ENST00000498039 STK24Q9Y6E0 443 aa11.04□□□□□ -0.64
RNF6-207ENST00000498039 CDAN1Q8IWY9 1227 aa11.03□□□□□ -0.64
RNF6-207ENST00000498039 MARVELD3Q96A59 401 aa11.03□□□□□ -0.64
RNF6-207ENST00000498039 STK25O00506 426 aa11.01□□□□□ -0.65
RNF6-207ENST00000498039 PKD2Q13563 968 aa11.01□□□□□ -0.65
RNF6-207ENST00000498039 MICALL2Q8IY33 904 aa10.99□□□□□ -0.65
RNF6-207ENST00000498039 MS4A4AQ96JQ5 239 aa10.99□□□□□ -0.65
RNF6-207ENST00000498039 RGL2O15211 777 aa10.98□□□□□ -0.65
RNF6-207ENST00000498039 EMP3P54852 163 aa10.96□□□□□ -0.65
RNF6-207ENST00000498039 NLRP6P59044 892 aa10.96□□□□□ -0.65
RNF6-207ENST00000498039 ZNF710Q8N1W2 664 aa10.93□□□□□ -0.66
RNF6-207ENST00000498039 HOXB3P14651 431 aaPredicted RBP10.9□□□□□ -0.66
RNF6-207ENST00000498039 DOK7Q18PE1 504 aa10.9□□□□□ -0.66
RNF6-207ENST00000498039 TMEM92Q6UXU6 159 aa10.9□□□□□ -0.66
RNF6-207ENST00000498039 FBXO22Q8NEZ5 403 aa10.9□□□□□ -0.66
RNF6-207ENST00000498039 MFRPQ9BY79 579 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms