RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-216ENST00000497809 PROM2Q8N271 834 aa11.83□□□□□ -0.52
NEB-216ENST00000497809 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
NEB-216ENST00000497809 IGSF3O75054 1194 aa11.79□□□□□ -0.52
NEB-216ENST00000497809 CHGAP10645 457 aaKnown RBP11.79□□□□□ -0.52
NEB-216ENST00000497809 ABCB7O75027 752 aa11.78□□□□□ -0.52
NEB-216ENST00000497809 C1orf115Q9H7X2 142 aa11.78□□□□□ -0.52
NEB-216ENST00000497809 SAMD1Q6SPF0 538 aaPredicted RBP11.77□□□□□ -0.53
NEB-216ENST00000497809 NECTIN2Q92692 538 aa11.77□□□□□ -0.53
NEB-216ENST00000497809 ZMYND15Q9H091 742 aa11.76□□□□□ -0.53
NEB-216ENST00000497809 ZBTB7CA1YPR0 619 aa11.73□□□□□ -0.53
NEB-216ENST00000497809 RSPH6AQ9H0K4 717 aa11.73□□□□□ -0.53
NEB-216ENST00000497809 NEUROD2Q15784 382 aa11.72□□□□□ -0.53
NEB-216ENST00000497809 PLEKHG5O94827 1062 aa11.72□□□□□ -0.53
NEB-216ENST00000497809 LMOD2Q6P5Q4 547 aa11.67□□□□□ -0.54
NEB-216ENST00000497809 SHROOM4Q9ULL8 1493 aa11.66□□□□□ -0.54
NEB-216ENST00000497809 SPOCK2Q92563 424 aa11.66□□□□□ -0.54
NEB-216ENST00000497809 RBM42Q9BTD8 480 aaKnown RBP11.66□□□□□ -0.54
NEB-216ENST00000497809 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.65□□□□□ -0.55
NEB-216ENST00000497809 PDIA4P13667 645 aaKnown RBP11.63□□□□□ -0.55
NEB-216ENST00000497809 ARID3CA6NKF2 412 aa11.58□□□□□ -0.56
NEB-216ENST00000497809 CDK11BP21127 795 aaKnown RBP11.56□□□□□ -0.56
NEB-216ENST00000497809 CDK11AQ9UQ88 783 aaPredicted RBP11.56□□□□□ -0.56
NEB-216ENST00000497809 SLC24A3Q9HC58 644 aa11.52□□□□□ -0.56
NEB-216ENST00000497809 CHMP4AQ9BY43 222 aa11.52□□□□□ -0.57
NEB-216ENST00000497809 NKX1-1Q15270 411 aaPredicted RBP11.5□□□□□ -0.57
NEB-216ENST00000497809 HS6ST3Q8IZP7 471 aa11.5□□□□□ -0.57
NEB-216ENST00000497809 KCTD17Q8N5Z5 321 aa11.48□□□□□ -0.57
NEB-216ENST00000497809 APBB1O00213 710 aa11.47□□□□□ -0.57
NEB-216ENST00000497809 HSP90B1P14625 803 aaKnown RBP11.47□□□□□ -0.57
NEB-216ENST00000497809 POLA2Q14181 598 aa11.47□□□□□ -0.57
NEB-216ENST00000497809 ZC3H15Q8WU90 426 aaKnown RBP11.47□□□□□ -0.57
NEB-216ENST00000497809 GTPBP6O43824 516 aaPredicted RBP11.45□□□□□ -0.58
NEB-216ENST00000497809 MKRN4PQ13434 485 aaPredicted RBP11.45□□□□□ -0.58
NEB-216ENST00000497809 RAD21O60216 631 aa11.45□□□□□ -0.58
NEB-216ENST00000497809 RGS22Q8NE09 1264 aa11.44□□□□□ -0.58
NEB-216ENST00000497809 CHRDL2Q6WN34 429 aa11.43□□□□□ -0.58
NEB-216ENST00000497809 ZNF428Q96B54 188 aa11.43□□□□□ -0.58
NEB-216ENST00000497809 HMGB1P09429 215 aaKnown RBP11.42□□□□□ -0.58
NEB-216ENST00000497809 MTMR7Q9Y216 660 aa11.39□□□□□ -0.59
NEB-216ENST00000497809 P3H3Q8IVL6 736 aa11.37□□□□□ -0.59
NEB-216ENST00000497809 KCNV2Q8TDN2 545 aa11.37□□□□□ -0.59
NEB-216ENST00000497809 PUS7Q96PZ0 661 aaKnown RBP11.37□□□□□ -0.59
NEB-216ENST00000497809 FOXD4L5Q5VV16 416 aaPredicted RBP11.33□□□□□ -0.6
NEB-216ENST00000497809 FOXD4L4Q8WXT5 416 aaPredicted RBP11.33□□□□□ -0.6
NEB-216ENST00000497809 ZBTB12Q9Y330 459 aaPredicted RBP11.32□□□□□ -0.6
NEB-216ENST00000497809 RBM25P49756 843 aaKnown RBP11.31□□□□□ -0.6
NEB-216ENST00000497809 MKRN3Q13064 507 aaKnown RBP11.31□□□□□ -0.6
NEB-216ENST00000497809 CCDC82Q8N4S0 544 aa11.3□□□□□ -0.6
NEB-216ENST00000497809 GPBP1L1Q9HC44 474 aaPredicted RBP11.3□□□□□ -0.6
NEB-216ENST00000497809 IL27Q8NEV9 243 aa11.3□□□□□ -0.6
NEB-216ENST00000497809 AKT1S1Q96B36 256 aa11.29□□□□□ -0.6
NEB-216ENST00000497809 CIZ1Q9ULV3 898 aaPredicted RBP11.29□□□□□ -0.6
NEB-216ENST00000497809 RNF25Q96BH1 459 aaPredicted RBP11.28□□□□□ -0.6
NEB-216ENST00000497809 AEBP1Q8IUX7 1158 aa11.25□□□□□ -0.61
NEB-216ENST00000497809 TRAIPQ9BWF2 469 aa11.23□□□□□ -0.61
NEB-216ENST00000497809 DHX37Q8IY37 1157 aaKnown RBP11.22□□□□□ -0.61
NEB-216ENST00000497809 MFAP1P55081 439 aaKnown RBP11.2□□□□□ -0.62
NEB-216ENST00000497809 TMCO4Q5TGY1 634 aa11.2□□□□□ -0.62
NEB-216ENST00000497809 ZMYND10O75800 440 aa11.19□□□□□ -0.62
NEB-216ENST00000497809 SP7Q8TDD2 431 aaPredicted RBP11.16□□□□□ -0.62
NEB-216ENST00000497809 WDR70Q9NW82 654 aa11.14□□□□□ -0.63
NEB-216ENST00000497809 REM2Q8IYK8 340 aaPredicted RBP11.14□□□□□ -0.63
NEB-216ENST00000497809 GZF1Q9H116 711 aaPredicted RBP11.14□□□□□ -0.63
NEB-216ENST00000497809 PLCD3Q8N3E9 789 aa11.13□□□□□ -0.63
NEB-216ENST00000497809 KDM4CQ9H3R0 1056 aa11.11□□□□□ -0.63
NEB-216ENST00000497809 CADPS2Q86UW7 1296 aa11.1□□□□□ -0.63
NEB-216ENST00000497809 OSCARQ8IYS5 282 aa11.1□□□□□ -0.63
NEB-216ENST00000497809 TRIM41Q8WV44 630 aa11.09□□□□□ -0.63
NEB-216ENST00000497809 USP35Q9P2H5 1018 aa11.09□□□□□ -0.63
NEB-216ENST00000497809 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
NEB-216ENST00000497809 SEMA3EO15041 775 aa11.08□□□□□ -0.64
NEB-216ENST00000497809 BRD2P25440 801 aaKnown RBP11.08□□□□□ -0.64
NEB-216ENST00000497809 E9PSI1 815 aa11.07□□□□□ -0.64
NEB-216ENST00000497809 CLUAP1Q96AJ1 413 aa11.07□□□□□ -0.64
NEB-216ENST00000497809 TRAK2O60296 914 aa11.06□□□□□ -0.64
NEB-216ENST00000497809 TESPA1A2RU30 521 aaPredicted RBP11.04□□□□□ -0.64
NEB-216ENST00000497809 BARGINQ6ZT62 677 aa11.04□□□□□ -0.64
NEB-216ENST00000497809 UBE2Q2Q8WVN8 375 aa11.04□□□□□ -0.64
NEB-216ENST00000497809 STK25O00506 426 aa11.03□□□□□ -0.64
NEB-216ENST00000497809 FAM177A1Q8N128 213 aaPredicted RBP11.03□□□□□ -0.64
NEB-216ENST00000497809 PITPNM1O00562 1244 aa11.01□□□□□ -0.65
NEB-216ENST00000497809 IRF5Q13568 498 aa11.01□□□□□ -0.65
NEB-216ENST00000497809 FXR2P51116 673 aaKnown RBP eCLIP11□□□□□ -0.65
NEB-216ENST00000497809 POLR3GLQ9BT43 218 aa11□□□□□ -0.65
NEB-216ENST00000497809 ZNF692Q9BU19 519 aaPredicted RBP11□□□□□ -0.65
NEB-216ENST00000497809 ONECUT3O60422 494 aaPredicted RBP10.99□□□□□ -0.65
NEB-216ENST00000497809 MIER1Q8N108 512 aa10.99□□□□□ -0.65
NEB-216ENST00000497809 RETREG2Q8NC44 543 aa10.99□□□□□ -0.65
NEB-216ENST00000497809 FLIIQ13045 1269 aa10.99□□□□□ -0.65
NEB-216ENST00000497809 AK7Q96M32 723 aa10.99□□□□□ -0.65
NEB-216ENST00000497809 A6NJR5 290 aa10.97□□□□□ -0.65
NEB-216ENST00000497809 HAX1O00165 279 aa10.97□□□□□ -0.65
NEB-216ENST00000497809 RIOK3O14730 519 aaKnown RBP10.96□□□□□ -0.65
NEB-216ENST00000497809 ARHGEF1Q92888 912 aaKnown RBP10.96□□□□□ -0.66
NEB-216ENST00000497809 FAM117AQ9C073 453 aa10.96□□□□□ -0.66
NEB-216ENST00000497809 BCL11AQ9H165 835 aa10.96□□□□□ -0.66
NEB-216ENST00000497809 STAG3Q9UJ98 1225 aa10.94□□□□□ -0.66
NEB-216ENST00000497809 FAM9AQ8IZU1 332 aaPredicted RBP10.93□□□□□ -0.66
NEB-216ENST00000497809 FBXW7Q969H0 707 aa10.92□□□□□ -0.66
NEB-216ENST00000497809 ZNF777Q9ULD5 760 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms