RNA–Protein interactions for RNA: ENST00000497715.1

CUL3-212, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 2,400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-212ENST00000497715 NAP1L5Q96NT1 182 aaPredicted RBP7.39□□□□□ -1.23
CUL3-212ENST00000497715 MYT1LQ9UL68 1186 aa7.39□□□□□ -1.23
CUL3-212ENST00000497715 CDK11AQ9UQ88 783 aaPredicted RBP7.39□□□□□ -1.23
CUL3-212ENST00000497715 TSHZ2Q9NRE2 1034 aa7.39□□□□□ -1.23
CUL3-212ENST00000497715 FBXO3Q9UK99 471 aa7.39□□□□□ -1.23
CUL3-212ENST00000497715 DNAJC5BQ9UF47 199 aa7.37□□□□□ -1.23
CUL3-212ENST00000497715 NAP1L2Q9ULW6 460 aaPredicted RBP7.33□□□□□ -1.24
CUL3-212ENST00000497715 POLR3GLQ9BT43 218 aa7.32□□□□□ -1.24
CUL3-212ENST00000497715 CHMP4BQ9H444 224 aaKnown RBP7.31□□□□□ -1.24
CUL3-212ENST00000497715 IL27Q8NEV9 243 aa7.31□□□□□ -1.24
CUL3-212ENST00000497715 BRPF3Q9ULD4 1205 aa7.31□□□□□ -1.24
CUL3-212ENST00000497715 ZFP91Q96JP5 570 aaPredicted RBP7.29□□□□□ -1.24
CUL3-212ENST00000497715 PLCB2Q00722 1185 aa7.28□□□□□ -1.24
CUL3-212ENST00000497715 GLIPR1L2Q4G1C9 344 aa7.28□□□□□ -1.24
CUL3-212ENST00000497715 PRDM10Q9NQV6 1147 aa7.28□□□□□ -1.24
CUL3-212ENST00000497715 HSP90B1P14625 803 aaKnown RBP7.27□□□□□ -1.25
CUL3-212ENST00000497715 DCAF8L2P0C7V8 631 aa7.26□□□□□ -1.25
CUL3-212ENST00000497715 ZNF326Q5BKZ1 582 aaKnown RBP7.25□□□□□ -1.25
CUL3-212ENST00000497715 TMED8Q6PL24 325 aaPredicted RBP7.23□□□□□ -1.25
CUL3-212ENST00000497715 SECISBP2LQ93073 1101 aaKnown RBP7.23□□□□□ -1.25
CUL3-212ENST00000497715 RNF216Q9NWF9 866 aaPredicted RBP7.23□□□□□ -1.25
CUL3-212ENST00000497715 BCCIPQ9P287 314 aaKnown RBP eCLIP7.23□□□□□ -1.25
CUL3-212ENST00000497715 CNPY4Q8N129 248 aa7.23□□□□□ -1.25
CUL3-212ENST00000497715 KCNG1Q9UIX4 513 aa7.21□□□□□ -1.26
CUL3-212ENST00000497715 BBXQ8WY36 941 aaPredicted RBP7.2□□□□□ -1.26
CUL3-212ENST00000497715 PPP4R3CPQ6ZMV5 832 aa7.18□□□□□ -1.26
CUL3-212ENST00000497715 CCDC9Q9Y3X0 531 aaKnown RBP7.18□□□□□ -1.26
CUL3-212ENST00000497715 GTF2E1P29083 439 aaPredicted RBP7.17□□□□□ -1.26
CUL3-212ENST00000497715 IPO4Q8TEX9 1081 aaKnown RBP7.16□□□□□ -1.26
CUL3-212ENST00000497715 ZNF592Q92610 1267 aa7.16□□□□□ -1.26
CUL3-212ENST00000497715 WWC1Q8IX03 1113 aa7.14□□□□□ -1.27
CUL3-212ENST00000497715 TEX2Q8IWB9 1127 aa7.12□□□□□ -1.27
CUL3-212ENST00000497715 PCDH10Q9P2E7 1040 aa7.12□□□□□ -1.27
CUL3-212ENST00000497715 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.12□□□□□ -1.27
CUL3-212ENST00000497715 SHROOM4Q9ULL8 1493 aa7.12□□□□□ -1.27
CUL3-212ENST00000497715 KDM2AQ9Y2K7 1162 aa7.12□□□□□ -1.27
CUL3-212ENST00000497715 CHRM1P11229 460 aaPredicted RBP7.11□□□□□ -1.27
CUL3-212ENST00000497715 NCLP19338 710 aaKnown RBP7.11□□□□□ -1.27
CUL3-212ENST00000497715 FAM43BQ6ZT52 329 aaPredicted RBP7.1□□□□□ -1.27
CUL3-212ENST00000497715 FBLN2P98095 1184 aa7.1□□□□□ -1.27
CUL3-212ENST00000497715 TICAM2Q86XR7 235 aa7.1□□□□□ -1.27
CUL3-212ENST00000497715 YTHDC1Q96MU7 727 aaKnown RBP7.1□□□□□ -1.27
CUL3-212ENST00000497715 PLCD3Q8N3E9 789 aa7.09□□□□□ -1.27
CUL3-212ENST00000497715 SUPT16HQ9Y5B9 1047 aaKnown RBP7.09□□□□□ -1.27
CUL3-212ENST00000497715 FTSJ3Q8IY81 847 aaKnown RBP7.09□□□□□ -1.27
CUL3-212ENST00000497715 STAC3Q96MF2 364 aa7.09□□□□□ -1.27
CUL3-212ENST00000497715 RBM19Q9Y4C8 960 aaKnown RBP7.08□□□□□ -1.28
CUL3-212ENST00000497715 LHX8Q68G74 356 aa7.08□□□□□ -1.28
CUL3-212ENST00000497715 ZNF428Q96B54 188 aa7.06□□□□□ -1.28
CUL3-212ENST00000497715 ZNF526Q8TF50 670 aaPredicted RBP7.05□□□□□ -1.28
CUL3-212ENST00000497715 CANXP27824 592 aaKnown RBP7.04□□□□□ -1.28
CUL3-212ENST00000497715 ZNF692Q9BU19 519 aaPredicted RBP7.03□□□□□ -1.28
CUL3-212ENST00000497715 PRDM16Q9HAZ2 1276 aa7.03□□□□□ -1.28
CUL3-212ENST00000497715 PUS7Q96PZ0 661 aaKnown RBP7.02□□□□□ -1.28
CUL3-212ENST00000497715 RGS3P49796 1198 aa7.02□□□□□ -1.29
CUL3-212ENST00000497715 CWC22Q9HCG8 908 aaKnown RBP7.01□□□□□ -1.29
CUL3-212ENST00000497715 CERS3Q8IU89 383 aa7.01□□□□□ -1.29
CUL3-212ENST00000497715 ZNF830Q96NB3 372 aaPredicted RBP7.01□□□□□ -1.29
CUL3-212ENST00000497715 USP35Q9P2H5 1018 aa7.01□□□□□ -1.29
CUL3-212ENST00000497715 PRDM4Q9UKN5 801 aa7.01□□□□□ -1.29
CUL3-212ENST00000497715 TRHP20396 242 aaPredicted RBP7□□□□□ -1.29
CUL3-212ENST00000497715 DSG3P32926 999 aa6.99□□□□□ -1.29
CUL3-212ENST00000497715 DIEXFQ68CQ4 756 aaKnown RBP6.99□□□□□ -1.29
CUL3-212ENST00000497715 NECTIN2Q92692 538 aa6.99□□□□□ -1.29
CUL3-212ENST00000497715 ARID3AQ99856 593 aa6.99□□□□□ -1.29
CUL3-212ENST00000497715 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.99□□□□□ -1.29
CUL3-212ENST00000497715 PATL2C9JE40 543 aaKnown RBP6.98□□□□□ -1.29
CUL3-212ENST00000497715 NBR1Q14596 966 aa6.98□□□□□ -1.29
CUL3-212ENST00000497715 MYO15BQ96JP2 1530 aa6.98□□□□□ -1.29
CUL3-212ENST00000497715 SOX12O15370 315 aa6.97□□□□□ -1.29
CUL3-212ENST00000497715 CNGB1Q14028 1251 aaPredicted RBP6.96□□□□□ -1.3
CUL3-212ENST00000497715 PLCD4Q9BRC7 762 aa6.96□□□□□ -1.3
CUL3-212ENST00000497715 VGLL3A8MV65 326 aa6.95□□□□□ -1.3
CUL3-212ENST00000497715 CLSTN1O94985 981 aa6.95□□□□□ -1.3
CUL3-212ENST00000497715 HSP90AA2PQ14568 343 aaPredicted RBP6.95□□□□□ -1.3
CUL3-212ENST00000497715 FAM193AP78312 1265 aa6.95□□□□□ -1.3
CUL3-212ENST00000497715 PSMD1Q99460 953 aa6.94□□□□□ -1.3
CUL3-212ENST00000497715 GRIPAP1Q4V328 841 aa6.93□□□□□ -1.3
CUL3-212ENST00000497715 HMGB1P09429 215 aaKnown RBP6.93□□□□□ -1.3
CUL3-212ENST00000497715 OS9Q13438 667 aaPredicted RBP6.92□□□□□ -1.3
CUL3-212ENST00000497715 SLC52A1Q9NWF4 448 aa6.92□□□□□ -1.3
CUL3-212ENST00000497715 RGS22Q8NE09 1264 aa6.91□□□□□ -1.3
CUL3-212ENST00000497715 C11orf95C9JLR9 678 aaPredicted RBP6.9□□□□□ -1.3
CUL3-212ENST00000497715 RTL5Q5HYW3 569 aaPredicted RBP6.9□□□□□ -1.3
CUL3-212ENST00000497715 MYCNP04198 464 aaPredicted RBP6.9□□□□□ -1.31
CUL3-212ENST00000497715 CDCA8Q53HL2 280 aa6.89□□□□□ -1.31
CUL3-212ENST00000497715 RRP9O43818 475 aaKnown RBP6.89□□□□□ -1.31
CUL3-212ENST00000497715 FANCIQ9NVI1 1328 aa6.88□□□□□ -1.31
CUL3-212ENST00000497715 TMEM51Q9NW97 253 aa6.87□□□□□ -1.31
CUL3-212ENST00000497715 SPINK5Q9NQ38 1064 aaPredicted RBP6.87□□□□□ -1.31
CUL3-212ENST00000497715 CALD1Q05682 793 aaKnown RBP6.86□□□□□ -1.31
CUL3-212ENST00000497715 U3KPZ7 1027 aaPredicted RBP6.86□□□□□ -1.31
CUL3-212ENST00000497715 FAM9BQ8IZU0 186 aa6.85□□□□□ -1.31
CUL3-212ENST00000497715 HDAC5Q9UQL6 1122 aa6.85□□□□□ -1.31
CUL3-212ENST00000497715 ANAPC15P60006 121 aa6.84□□□□□ -1.31
CUL3-212ENST00000497715 MPNDQ8N594 471 aa6.84□□□□□ -1.31
CUL3-212ENST00000497715 ARID4BQ4LE39 1312 aaPredicted RBP6.84□□□□□ -1.31
CUL3-212ENST00000497715 KDM4AO75164 1064 aa6.84□□□□□ -1.32
CUL3-212ENST00000497715 CAPN15O75808 1086 aa6.83□□□□□ -1.32
CUL3-212ENST00000497715 PTMAP06454 111 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms