RNA–Protein interactions for RNA: ENST00000497567.1

ATP13A3-210, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 532 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-210ENST00000497567 HAX1O00165 279 aa16.47■□□□□ 0.23
ATP13A3-210ENST00000497567 ECM2O94769 699 aaPredicted RBP16.47■□□□□ 0.23
ATP13A3-210ENST00000497567 ZRANB1Q9UGI0 708 aa16.46■□□□□ 0.23
ATP13A3-210ENST00000497567 CCDC61Q9Y6R9 512 aa16.46■□□□□ 0.23
ATP13A3-210ENST00000497567 PAK3O75914 559 aaPredicted RBP16.45■□□□□ 0.22
ATP13A3-210ENST00000497567 EVX2Q03828 476 aa16.43■□□□□ 0.22
ATP13A3-210ENST00000497567 PYGBP11216 843 aa16.42■□□□□ 0.22
ATP13A3-210ENST00000497567 TRIM41Q8WV44 630 aa16.38■□□□□ 0.21
ATP13A3-210ENST00000497567 RGL2O15211 777 aa16.36■□□□□ 0.21
ATP13A3-210ENST00000497567 PHF12Q96QT6 1004 aa16.36■□□□□ 0.21
ATP13A3-210ENST00000497567 CHRM1P11229 460 aaPredicted RBP16.34■□□□□ 0.21
ATP13A3-210ENST00000497567 ZNF579Q8NAF0 562 aaKnown RBP16.31■□□□□ 0.2
ATP13A3-210ENST00000497567 RNF25Q96BH1 459 aaPredicted RBP16.31■□□□□ 0.2
ATP13A3-210ENST00000497567 KIF12Q96FN5 646 aa16.29■□□□□ 0.2
ATP13A3-210ENST00000497567 MAP3K13O43283 966 aa16.26■□□□□ 0.19
ATP13A3-210ENST00000497567 DCAF8L2P0C7V8 631 aa16.2■□□□□ 0.18
ATP13A3-210ENST00000497567 PCDHB8Q9UN66 801 aa16.2■□□□□ 0.18
ATP13A3-210ENST00000497567 PCDHB13Q9Y5F0 798 aa16.2■□□□□ 0.18
ATP13A3-210ENST00000497567 RIOK3O14730 519 aaKnown RBP16.19■□□□□ 0.18
ATP13A3-210ENST00000497567 IFNL1Q8IU54 200 aa16.17■□□□□ 0.18
ATP13A3-210ENST00000497567 MS4A3Q96HJ5 214 aa16.15■□□□□ 0.18
ATP13A3-210ENST00000497567 SGIP1Q9BQI5 828 aa16.14■□□□□ 0.17
ATP13A3-210ENST00000497567 ZNF467Q7Z7K2 595 aaPredicted RBP16.13■□□□□ 0.17
ATP13A3-210ENST00000497567 GALR2O43603 387 aaPredicted RBP16.1■□□□□ 0.17
ATP13A3-210ENST00000497567 TRPC6Q9Y210 931 aa16.08■□□□□ 0.16
ATP13A3-210ENST00000497567 VGFO15240 615 aaPredicted RBP16.07■□□□□ 0.16
ATP13A3-210ENST00000497567 GABBR2O75899 941 aa16.05■□□□□ 0.16
ATP13A3-210ENST00000497567 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.04■□□□□ 0.16
ATP13A3-210ENST00000497567 ZFP91Q96JP5 570 aaPredicted RBP16.04■□□□□ 0.16
ATP13A3-210ENST00000497567 PSEN1P49768 467 aa16.02■□□□□ 0.16
ATP13A3-210ENST00000497567 PDAP1Q13442 181 aaKnown RBP16.02■□□□□ 0.16
ATP13A3-210ENST00000497567 CHGAP10645 457 aaKnown RBP16.01■□□□□ 0.15
ATP13A3-210ENST00000497567 SP7Q8TDD2 431 aaPredicted RBP16.01■□□□□ 0.15
ATP13A3-210ENST00000497567 CLCN6P51797 869 aa15.99■□□□□ 0.15
ATP13A3-210ENST00000497567 TAOK2Q9UL54 1235 aa15.99■□□□□ 0.15
ATP13A3-210ENST00000497567 STK25O00506 426 aa15.96■□□□□ 0.15
ATP13A3-210ENST00000497567 HS6ST3Q8IZP7 471 aa15.95■□□□□ 0.14
ATP13A3-210ENST00000497567 BCL11BQ9C0K0 894 aaPredicted RBP15.95■□□□□ 0.14
ATP13A3-210ENST00000497567 STK24Q9Y6E0 443 aa15.92■□□□□ 0.14
ATP13A3-210ENST00000497567 TMEM106CQ9BVX2 250 aa15.9■□□□□ 0.14
ATP13A3-210ENST00000497567 BMP2KQ9NSY1 1161 aaPredicted RBP15.9■□□□□ 0.14
ATP13A3-210ENST00000497567 TIE1P35590 1138 aa15.88■□□□□ 0.13
ATP13A3-210ENST00000497567 TTLL13PA6NNM8 815 aa15.87■□□□□ 0.13
ATP13A3-210ENST00000497567 CABP2Q9NPB3 220 aa15.82■□□□□ 0.12
ATP13A3-210ENST00000497567 ATMINO43313 823 aaPredicted RBP15.81■□□□□ 0.12
ATP13A3-210ENST00000497567 BBXQ8WY36 941 aaPredicted RBP15.81■□□□□ 0.12
ATP13A3-210ENST00000497567 ATN1P54259 1190 aaPredicted RBP15.8■□□□□ 0.12
ATP13A3-210ENST00000497567 NKX1-1Q15270 411 aaPredicted RBP15.8■□□□□ 0.12
ATP13A3-210ENST00000497567 DNAJC5Q9H3Z4 198 aa15.79■□□□□ 0.12
ATP13A3-210ENST00000497567 ASTLQ6HA08 431 aaPredicted RBP15.78■□□□□ 0.12
ATP13A3-210ENST00000497567 DCBLD2Q96PD2 775 aa15.78■□□□□ 0.12
ATP13A3-210ENST00000497567 POTEIP0CG38 1075 aa15.77■□□□□ 0.12
ATP13A3-210ENST00000497567 EFCAB3Q8N7B9 438 aa15.76■□□□□ 0.11
ATP13A3-210ENST00000497567 TRIM35Q9UPQ4 493 aa15.76■□□□□ 0.11
ATP13A3-210ENST00000497567 PELP1Q8IZL8 1130 aaKnown RBP15.73■□□□□ 0.11
ATP13A3-210ENST00000497567 GOLGA2Q08379 1002 aa15.69■□□□□ 0.1
ATP13A3-210ENST00000497567 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.69■□□□□ 0.1
ATP13A3-210ENST00000497567 MFRPQ9BY79 579 aa15.66■□□□□ 0.1
ATP13A3-210ENST00000497567 MKRN3Q13064 507 aaKnown RBP15.65■□□□□ 0.1
ATP13A3-210ENST00000497567 PAXIP1Q6ZW49 1069 aaPredicted RBP15.64■□□□□ 0.09
ATP13A3-210ENST00000497567 PHF8Q9UPP1 1060 aa15.64■□□□□ 0.09
ATP13A3-210ENST00000497567 SOX12O15370 315 aa15.62■□□□□ 0.09
ATP13A3-210ENST00000497567 GTPBP6O43824 516 aaPredicted RBP15.62■□□□□ 0.09
ATP13A3-210ENST00000497567 CFAP44Q96MT7 982 aa15.62■□□□□ 0.09
ATP13A3-210ENST00000497567 PLCB2Q00722 1185 aa15.6■□□□□ 0.09
ATP13A3-210ENST00000497567 SPRYD3Q8NCJ5 442 aa15.59■□□□□ 0.09
ATP13A3-210ENST00000497567 FBXO22Q8NEZ5 403 aa15.59■□□□□ 0.09
ATP13A3-210ENST00000497567 NLRP6P59044 892 aa15.56■□□□□ 0.08
ATP13A3-210ENST00000497567 MS4A4AQ96JQ5 239 aa15.56■□□□□ 0.08
ATP13A3-210ENST00000497567 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.56■□□□□ 0.08
ATP13A3-210ENST00000497567 IER5LQ5T953 404 aa15.55■□□□□ 0.08
ATP13A3-210ENST00000497567 IRX5P78411 483 aaPredicted RBP15.54■□□□□ 0.08
ATP13A3-210ENST00000497567 ILDR1Q86SU0 546 aaPredicted RBP15.54■□□□□ 0.08
ATP13A3-210ENST00000497567 SLC39A7Q92504 469 aa15.53■□□□□ 0.08
ATP13A3-210ENST00000497567 COLQQ9Y215 455 aaPredicted RBP15.51■□□□□ 0.07
ATP13A3-210ENST00000497567 POTEFA5A3E0 1075 aa15.5■□□□□ 0.07
ATP13A3-210ENST00000497567 METRNQ9UJH8 293 aa15.5■□□□□ 0.07
ATP13A3-210ENST00000497567 PPP1R37O75864 691 aa15.49■□□□□ 0.07
ATP13A3-210ENST00000497567 C7P10643 843 aa15.49■□□□□ 0.07
ATP13A3-210ENST00000497567 PDCD7Q8N8D1 485 aaKnown RBP15.49■□□□□ 0.07
ATP13A3-210ENST00000497567 DPY19L2Q6NUT2 758 aa15.48■□□□□ 0.07
ATP13A3-210ENST00000497567 OCEL1Q9H607 264 aa15.47■□□□□ 0.07
ATP13A3-210ENST00000497567 RYDENQ9NUL5 291 aaKnown RBP15.47■□□□□ 0.07
ATP13A3-210ENST00000497567 SEC24BO95487 1268 aa15.44■□□□□ 0.06
ATP13A3-210ENST00000497567 PLCG2P16885 1265 aa15.44■□□□□ 0.06
ATP13A3-210ENST00000497567 HAP1P54257 671 aaPredicted RBP15.38■□□□□ 0.05
ATP13A3-210ENST00000497567 TSHZ2Q9NRE2 1034 aa15.38■□□□□ 0.05
ATP13A3-210ENST00000497567 POTEB2H3BUK9 544 aa15.28■□□□□ 0.04
ATP13A3-210ENST00000497567 SLC24A1O60721 1099 aa15.28■□□□□ 0.04
ATP13A3-210ENST00000497567 MICALL2Q8IY33 904 aa15.28■□□□□ 0.04
ATP13A3-210ENST00000497567 CADPS2Q86UW7 1296 aa15.27■□□□□ 0.04
ATP13A3-210ENST00000497567 BOLA1Q9Y3E2 137 aa15.27■□□□□ 0.04
ATP13A3-210ENST00000497567 L3MBTL3Q96JM7 780 aaPredicted RBP15.25■□□□□ 0.03
ATP13A3-210ENST00000497567 POTEJP0CG39 1038 aa15.24■□□□□ 0.03
ATP13A3-210ENST00000497567 TMEM121BQ9BXQ6 578 aaPredicted RBP15.24■□□□□ 0.03
ATP13A3-210ENST00000497567 G3V3G9 751 aa15.2■□□□□ 0.02
ATP13A3-210ENST00000497567 KDM2AQ9Y2K7 1162 aa15.15■□□□□ 0.02
ATP13A3-210ENST00000497567 NCKAP5LQ9HCH0 1330 aa15.12■□□□□ 0.01
ATP13A3-210ENST00000497567 TMEM92Q6UXU6 159 aa15.11■□□□□ 0.01
ATP13A3-210ENST00000497567 C3orf67Q6ZVT6 689 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms