RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 C7P10643 843 aa12.25□□□□□ -0.45
PHC3-216ENST00000497171 ASTLQ6HA08 431 aaPredicted RBP12.25□□□□□ -0.45
PHC3-216ENST00000497171 POTEB2H3BUK9 544 aa12.22□□□□□ -0.45
PHC3-216ENST00000497171 ATMINO43313 823 aaPredicted RBP12.22□□□□□ -0.45
PHC3-216ENST00000497171 MAMSTRQ6ZN01 415 aa12.22□□□□□ -0.45
PHC3-216ENST00000497171 PELP1Q8IZL8 1130 aaKnown RBP12.22□□□□□ -0.45
PHC3-216ENST00000497171 MIER1Q8N108 512 aa12.2□□□□□ -0.46
PHC3-216ENST00000497171 CCDC61Q9Y6R9 512 aa12.18□□□□□ -0.46
PHC3-216ENST00000497171 SCUBE2Q9NQ36 999 aa12.14□□□□□ -0.47
PHC3-216ENST00000497171 POTEMA6NI47 508 aa12.13□□□□□ -0.47
PHC3-216ENST00000497171 KIF12Q96FN5 646 aa12.13□□□□□ -0.47
PHC3-216ENST00000497171 PLCD3Q8N3E9 789 aa12.11□□□□□ -0.47
PHC3-216ENST00000497171 ATN1P54259 1190 aaPredicted RBP12.1□□□□□ -0.47
PHC3-216ENST00000497171 ZBTB47Q9UFB7 747 aaPredicted RBP12.1□□□□□ -0.47
PHC3-216ENST00000497171 POTEGQ6S5H5 508 aa12.08□□□□□ -0.48
PHC3-216ENST00000497171 TIE1P35590 1138 aa12.07□□□□□ -0.48
PHC3-216ENST00000497171 BMP2KQ9NSY1 1161 aaPredicted RBP12.06□□□□□ -0.48
PHC3-216ENST00000497171 MAP3K13O43283 966 aa12.05□□□□□ -0.48
PHC3-216ENST00000497171 RASEFQ8IZ41 740 aa12.05□□□□□ -0.48
PHC3-216ENST00000497171 SEC24BO95487 1268 aa12.02□□□□□ -0.49
PHC3-216ENST00000497171 PCDH10Q9P2E7 1040 aa12.02□□□□□ -0.49
PHC3-216ENST00000497171 POTEJP0CG39 1038 aa11.99□□□□□ -0.49
PHC3-216ENST00000497171 SGIP1Q9BQI5 828 aa11.98□□□□□ -0.49
PHC3-216ENST00000497171 PCDHB13Q9Y5F0 798 aa11.97□□□□□ -0.49
PHC3-216ENST00000497171 TRPC6Q9Y210 931 aa11.96□□□□□ -0.49
PHC3-216ENST00000497171 TTLL13PA6NNM8 815 aa11.95□□□□□ -0.5
PHC3-216ENST00000497171 FAM212AQ96EL1 285 aa11.95□□□□□ -0.5
PHC3-216ENST00000497171 FAM163AQ96GL9 167 aaPredicted RBP11.95□□□□□ -0.5
PHC3-216ENST00000497171 IER5LQ5T953 404 aa11.93□□□□□ -0.5
PHC3-216ENST00000497171 TRIM35Q9UPQ4 493 aa11.91□□□□□ -0.5
PHC3-216ENST00000497171 POTEFA5A3E0 1075 aa11.88□□□□□ -0.51
PHC3-216ENST00000497171 NUBP1P53384 320 aa11.87□□□□□ -0.51
PHC3-216ENST00000497171 COLQQ9Y215 455 aaPredicted RBP11.85□□□□□ -0.51
PHC3-216ENST00000497171 FKBP8Q14318 412 aa11.84□□□□□ -0.51
PHC3-216ENST00000497171 IFNL1Q8IU54 200 aa11.83□□□□□ -0.52
PHC3-216ENST00000497171 TMEM106CQ9BVX2 250 aa11.83□□□□□ -0.52
PHC3-216ENST00000497171 PLCG2P16885 1265 aa11.82□□□□□ -0.52
PHC3-216ENST00000497171 LCE2DQ5TA82 110 aaPredicted RBP11.79□□□□□ -0.52
PHC3-216ENST00000497171 FBXO3Q9UK99 471 aa11.78□□□□□ -0.52
PHC3-216ENST00000497171 DCAF8Q5TAQ9 597 aa11.77□□□□□ -0.53
PHC3-216ENST00000497171 SLAIN1Q8ND83 568 aa11.77□□□□□ -0.53
PHC3-216ENST00000497171 PYGBP11216 843 aa11.69□□□□□ -0.54
PHC3-216ENST00000497171 OCEL1Q9H607 264 aa11.69□□□□□ -0.54
PHC3-216ENST00000497171 IRX5P78411 483 aaPredicted RBP11.67□□□□□ -0.54
PHC3-216ENST00000497171 CDAN1Q8IWY9 1227 aa11.66□□□□□ -0.54
PHC3-216ENST00000497171 KLHL34Q8N239 644 aa11.65□□□□□ -0.54
PHC3-216ENST00000497171 SNPHO15079 494 aa11.64□□□□□ -0.55
PHC3-216ENST00000497171 GOLGA2Q08379 1002 aa11.64□□□□□ -0.55
PHC3-216ENST00000497171 GSE1Q14687 1217 aa11.63□□□□□ -0.55
PHC3-216ENST00000497171 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.63□□□□□ -0.55
PHC3-216ENST00000497171 ST18O60284 1047 aa11.62□□□□□ -0.55
PHC3-216ENST00000497171 ZNF467Q7Z7K2 595 aaPredicted RBP11.61□□□□□ -0.55
PHC3-216ENST00000497171 PCDHB8Q9UN66 801 aa11.61□□□□□ -0.55
PHC3-216ENST00000497171 TMEM121BQ9BXQ6 578 aaPredicted RBP11.59□□□□□ -0.55
PHC3-216ENST00000497171 MKRN3Q13064 507 aaKnown RBP11.57□□□□□ -0.56
PHC3-216ENST00000497171 C3orf67Q6ZVT6 689 aa11.56□□□□□ -0.56
PHC3-216ENST00000497171 VASPP50552 380 aaPredicted RBP11.55□□□□□ -0.56
PHC3-216ENST00000497171 L3MBTL3Q96JM7 780 aaPredicted RBP11.53□□□□□ -0.56
PHC3-216ENST00000497171 CHRM1P11229 460 aaPredicted RBP11.47□□□□□ -0.57
PHC3-216ENST00000497171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.47□□□□□ -0.57
PHC3-216ENST00000497171 PSEN1P49768 467 aa11.46□□□□□ -0.57
PHC3-216ENST00000497171 G3V3G9 751 aa11.44□□□□□ -0.58
PHC3-216ENST00000497171 PDCD7Q8N8D1 485 aaKnown RBP11.44□□□□□ -0.58
PHC3-216ENST00000497171 MARVELD3Q96A59 401 aa11.42□□□□□ -0.58
PHC3-216ENST00000497171 PDAP1Q13442 181 aaKnown RBP11.41□□□□□ -0.58
PHC3-216ENST00000497171 EMP3P54852 163 aa11.4□□□□□ -0.58
PHC3-216ENST00000497171 CIZ1Q9ULV3 898 aaPredicted RBP11.38□□□□□ -0.59
PHC3-216ENST00000497171 SPOCK2Q92563 424 aa11.37□□□□□ -0.59
PHC3-216ENST00000497171 MMRN1Q13201 1228 aa11.36□□□□□ -0.59
PHC3-216ENST00000497171 SPNS2Q8IVW8 549 aa11.36□□□□□ -0.59
PHC3-216ENST00000497171 CABP2Q9NPB3 220 aa11.32□□□□□ -0.6
PHC3-216ENST00000497171 BOLA1Q9Y3E2 137 aa11.29□□□□□ -0.6
PHC3-216ENST00000497171 FAM205CA6NFA0 338 aa11.27□□□□□ -0.61
PHC3-216ENST00000497171 ILDR1Q86SU0 546 aaPredicted RBP11.27□□□□□ -0.61
PHC3-216ENST00000497171 HS3ST6Q96QI5 342 aa11.26□□□□□ -0.61
PHC3-216ENST00000497171 ZNF710Q8N1W2 664 aa11.25□□□□□ -0.61
PHC3-216ENST00000497171 TRIM41Q8WV44 630 aa11.25□□□□□ -0.61
PHC3-216ENST00000497171 DPY19L2Q6NUT2 758 aa11.24□□□□□ -0.61
PHC3-216ENST00000497171 IFNLR1Q8IU57 520 aaPredicted RBP11.24□□□□□ -0.61
PHC3-216ENST00000497171 DOK7Q18PE1 504 aa11.21□□□□□ -0.61
PHC3-216ENST00000497171 RIMBP2O15034 1052 aa11.2□□□□□ -0.62
PHC3-216ENST00000497171 KRTAP3-3Q9BYR6 98 aa11.15□□□□□ -0.62
PHC3-216ENST00000497171 KRTAP3-2Q9BYR7 98 aa11.15□□□□□ -0.62
PHC3-216ENST00000497171 ERBB3P21860 1342 aa11.14□□□□□ -0.63
PHC3-216ENST00000497171 POTEB3A0JP26 581 aa11.13□□□□□ -0.63
PHC3-216ENST00000497171 HOXB3P14651 431 aaPredicted RBP11.13□□□□□ -0.63
PHC3-216ENST00000497171 HOXB1P14653 301 aaPredicted RBP11.13□□□□□ -0.63
PHC3-216ENST00000497171 POTEBQ6S5H4 581 aa11.13□□□□□ -0.63
PHC3-216ENST00000497171 EFCAB3Q8N7B9 438 aa11.12□□□□□ -0.63
PHC3-216ENST00000497171 ZSWIM6Q9HCJ5 1215 aa11.06□□□□□ -0.64
PHC3-216ENST00000497171 RIOK3O14730 519 aaKnown RBP11.05□□□□□ -0.64
PHC3-216ENST00000497171 SOX12O15370 315 aa11.05□□□□□ -0.64
PHC3-216ENST00000497171 MICALL2Q8IY33 904 aa11.05□□□□□ -0.64
PHC3-216ENST00000497171 VGFO15240 615 aaPredicted RBP11.02□□□□□ -0.65
PHC3-216ENST00000497171 VARS2Q5ST30 1063 aaKnown RBP11.02□□□□□ -0.65
PHC3-216ENST00000497171 RNF166Q96A37 237 aaPredicted RBP11□□□□□ -0.65
PHC3-216ENST00000497171 TAOK2Q9UL54 1235 aa11□□□□□ -0.65
PHC3-216ENST00000497171 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.98□□□□□ -0.65
PHC3-216ENST00000497171 ZFP91Q96JP5 570 aaPredicted RBP10.98□□□□□ -0.65
PHC3-216ENST00000497171 MYT1LQ9UL68 1186 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms