RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 FAM212AQ96EL1 285 aa16.59■□□□□ 0.25
MDM2-220ENST00000496959 GABBR2O75899 941 aa16.56■□□□□ 0.24
MDM2-220ENST00000496959 CCDC61Q9Y6R9 512 aa16.54■□□□□ 0.24
MDM2-220ENST00000496959 DCAF8Q5TAQ9 597 aa16.53■□□□□ 0.24
MDM2-220ENST00000496959 PHF12Q96QT6 1004 aa16.52■□□□□ 0.24
MDM2-220ENST00000496959 GSE1Q14687 1217 aa16.47■□□□□ 0.23
MDM2-220ENST00000496959 KIF12Q96FN5 646 aa16.4■□□□□ 0.22
MDM2-220ENST00000496959 GALR2O43603 387 aaPredicted RBP16.38■□□□□ 0.21
MDM2-220ENST00000496959 CIZ1Q9ULV3 898 aaPredicted RBP16.38■□□□□ 0.21
MDM2-220ENST00000496959 MAP3K13O43283 966 aa16.34■□□□□ 0.21
MDM2-220ENST00000496959 MS4A3Q96HJ5 214 aa16.34■□□□□ 0.21
MDM2-220ENST00000496959 PYGBP11216 843 aa16.32■□□□□ 0.2
MDM2-220ENST00000496959 SGIP1Q9BQI5 828 aa16.31■□□□□ 0.2
MDM2-220ENST00000496959 DCBLD2Q96PD2 775 aa16.3■□□□□ 0.2
MDM2-220ENST00000496959 PCDHB13Q9Y5F0 798 aa16.29■□□□□ 0.2
MDM2-220ENST00000496959 CHRM1P11229 460 aaPredicted RBP16.23■□□□□ 0.19
MDM2-220ENST00000496959 TRIM41Q8WV44 630 aa16.22■□□□□ 0.19
MDM2-220ENST00000496959 IFNL1Q8IU54 200 aa16.18■□□□□ 0.18
MDM2-220ENST00000496959 POTEIP0CG38 1075 aa16.16■□□□□ 0.18
MDM2-220ENST00000496959 ZNF467Q7Z7K2 595 aaPredicted RBP16.14■□□□□ 0.17
MDM2-220ENST00000496959 TIE1P35590 1138 aa16.11■□□□□ 0.17
MDM2-220ENST00000496959 PCDHB8Q9UN66 801 aa16.11■□□□□ 0.17
MDM2-220ENST00000496959 TRPC6Q9Y210 931 aa16.11■□□□□ 0.17
MDM2-220ENST00000496959 ATMINO43313 823 aaPredicted RBP16.08■□□□□ 0.16
MDM2-220ENST00000496959 ASTLQ6HA08 431 aaPredicted RBP16.08■□□□□ 0.16
MDM2-220ENST00000496959 BMP2KQ9NSY1 1161 aaPredicted RBP16.07■□□□□ 0.16
MDM2-220ENST00000496959 TTLL13PA6NNM8 815 aa16.02■□□□□ 0.16
MDM2-220ENST00000496959 ECM2O94769 699 aaPredicted RBP16.01■□□□□ 0.15
MDM2-220ENST00000496959 ATN1P54259 1190 aaPredicted RBP16.01■□□□□ 0.15
MDM2-220ENST00000496959 TMEM106CQ9BVX2 250 aa16.01■□□□□ 0.15
MDM2-220ENST00000496959 PKD2Q13563 968 aa16■□□□□ 0.15
MDM2-220ENST00000496959 PELP1Q8IZL8 1130 aaKnown RBP15.97■□□□□ 0.15
MDM2-220ENST00000496959 PSEN1P49768 467 aa15.95■□□□□ 0.14
MDM2-220ENST00000496959 PDAP1Q13442 181 aaKnown RBP15.95■□□□□ 0.14
MDM2-220ENST00000496959 SLC39A7Q92504 469 aa15.94■□□□□ 0.14
MDM2-220ENST00000496959 RIOK3O14730 519 aaKnown RBP15.93■□□□□ 0.14
MDM2-220ENST00000496959 TRIM35Q9UPQ4 493 aa15.93■□□□□ 0.14
MDM2-220ENST00000496959 C7P10643 843 aa15.91■□□□□ 0.14
MDM2-220ENST00000496959 RNF25Q96BH1 459 aaPredicted RBP15.9■□□□□ 0.14
MDM2-220ENST00000496959 METRNQ9UJH8 293 aa15.88■□□□□ 0.13
MDM2-220ENST00000496959 TAOK2Q9UL54 1235 aa15.88■□□□□ 0.13
MDM2-220ENST00000496959 VGFO15240 615 aaPredicted RBP15.86■□□□□ 0.13
MDM2-220ENST00000496959 GOLGA2Q08379 1002 aa15.84■□□□□ 0.13
MDM2-220ENST00000496959 IER5LQ5T953 404 aa15.83■□□□□ 0.12
MDM2-220ENST00000496959 RGL2O15211 777 aa15.82■□□□□ 0.12
MDM2-220ENST00000496959 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.78■□□□□ 0.12
MDM2-220ENST00000496959 SEC24BO95487 1268 aa15.78■□□□□ 0.12
MDM2-220ENST00000496959 LHX8Q68G74 356 aa15.78■□□□□ 0.12
MDM2-220ENST00000496959 ZFP91Q96JP5 570 aaPredicted RBP15.78■□□□□ 0.12
MDM2-220ENST00000496959 MKRN3Q13064 507 aaKnown RBP15.77■□□□□ 0.12
MDM2-220ENST00000496959 CABP2Q9NPB3 220 aa15.76■□□□□ 0.11
MDM2-220ENST00000496959 PLCG2P16885 1265 aa15.7■□□□□ 0.1
MDM2-220ENST00000496959 AMER1Q5JTC6 1135 aaPredicted RBP15.69■□□□□ 0.1
MDM2-220ENST00000496959 COLQQ9Y215 455 aaPredicted RBP15.69■□□□□ 0.1
MDM2-220ENST00000496959 POTEFA5A3E0 1075 aa15.68■□□□□ 0.1
MDM2-220ENST00000496959 IRX5P78411 483 aaPredicted RBP15.68■□□□□ 0.1
MDM2-220ENST00000496959 OCEL1Q9H607 264 aa15.67■□□□□ 0.1
MDM2-220ENST00000496959 STK25O00506 426 aa15.66■□□□□ 0.1
MDM2-220ENST00000496959 BCL11BQ9C0K0 894 aaPredicted RBP15.66■□□□□ 0.1
MDM2-220ENST00000496959 POTEB2H3BUK9 544 aa15.65■□□□□ 0.1
MDM2-220ENST00000496959 STK24Q9Y6E0 443 aa15.65■□□□□ 0.1
MDM2-220ENST00000496959 EFCAB3Q8N7B9 438 aa15.63■□□□□ 0.09
MDM2-220ENST00000496959 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.63■□□□□ 0.096e-12■■□□□ 11.5
MDM2-220ENST00000496959 SOX12O15370 315 aa15.56■□□□□ 0.08
MDM2-220ENST00000496959 RTN4Q9NQC3 1192 aaKnown RBP15.56■□□□□ 0.08
MDM2-220ENST00000496959 MAMSTRQ6ZN01 415 aa15.55■□□□□ 0.08
MDM2-220ENST00000496959 DCAF8L2P0C7V8 631 aa15.54■□□□□ 0.08
MDM2-220ENST00000496959 ILDR1Q86SU0 546 aaPredicted RBP15.53■□□□□ 0.08
MDM2-220ENST00000496959 PDCD7Q8N8D1 485 aaKnown RBP15.53■□□□□ 0.08
MDM2-220ENST00000496959 CHGAP10645 457 aaKnown RBP15.52■□□□□ 0.08
MDM2-220ENST00000496959 POTEJP0CG39 1038 aa15.51■□□□□ 0.07
MDM2-220ENST00000496959 HS6ST3Q8IZP7 471 aa15.5■□□□□ 0.07
MDM2-220ENST00000496959 SCUBE2Q9NQ36 999 aa15.5■□□□□ 0.07
MDM2-220ENST00000496959 OTUD5Q96G74 571 aa15.48■□□□□ 0.07
MDM2-220ENST00000496959 L3MBTL3Q96JM7 780 aaPredicted RBP15.48■□□□□ 0.07
MDM2-220ENST00000496959 PHF8Q9UPP1 1060 aa15.46■□□□□ 0.07
MDM2-220ENST00000496959 NLRP6P59044 892 aa15.45■□□□□ 0.06
MDM2-220ENST00000496959 DPY19L2Q6NUT2 758 aa15.43■□□□□ 0.06
MDM2-220ENST00000496959 G3V3G9 751 aa15.42■□□□□ 0.06
MDM2-220ENST00000496959 MFRPQ9BY79 579 aa15.39■□□□□ 0.05
MDM2-220ENST00000496959 BOLA1Q9Y3E2 137 aa15.37■□□□□ 0.05
MDM2-220ENST00000496959 FBXO22Q8NEZ5 403 aa15.36■□□□□ 0.05
MDM2-220ENST00000496959 MS4A4AQ96JQ5 239 aa15.36■□□□□ 0.05
MDM2-220ENST00000496959 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.35■□□□□ 0.05
MDM2-220ENST00000496959 C3orf67Q6ZVT6 689 aa15.34■□□□□ 0.05
MDM2-220ENST00000496959 DNAJC5Q9H3Z4 198 aa15.34■□□□□ 0.05
MDM2-220ENST00000496959 SLAIN1Q8ND83 568 aa15.29■□□□□ 0.04
MDM2-220ENST00000496959 TMEM121BQ9BXQ6 578 aaPredicted RBP15.26■□□□□ 0.03
MDM2-220ENST00000496959 RYDENQ9NUL5 291 aaKnown RBP15.26■□□□□ 0.03
MDM2-220ENST00000496959 MICALL2Q8IY33 904 aa15.25■□□□□ 0.03
MDM2-220ENST00000496959 NKX1-1Q15270 411 aaPredicted RBP15.24■□□□□ 0.03
MDM2-220ENST00000496959 PPP1R37O75864 691 aa15.15■□□□□ 0.02
MDM2-220ENST00000496959 BBXQ8WY36 941 aaPredicted RBP15.15■□□□□ 0.02
MDM2-220ENST00000496959 GTPBP6O43824 516 aaPredicted RBP15.11■□□□□ 0.01
MDM2-220ENST00000496959 SNPHO15079 494 aa15.08■□□□□ 0
MDM2-220ENST00000496959 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.07■□□□□ 0
MDM2-220ENST00000496959 TMEM92Q6UXU6 159 aa15.04■□□□□ -0
MDM2-220ENST00000496959 FAM163AQ96GL9 167 aaPredicted RBP15.04■□□□□ -0
MDM2-220ENST00000496959 TMC2Q8TDI7 906 aa14.98□□□□□ -0.01
MDM2-220ENST00000496959 SPRYD3Q8NCJ5 442 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms