RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 MS4A3Q96HJ5 214 aa12.53□□□□□ -0.4
RBM39-240ENST00000495293 PLCD3Q8N3E9 789 aa12.5□□□□□ -0.41
RBM39-240ENST00000495293 POTEB2H3BUK9 544 aa12.49□□□□□ -0.41
RBM39-240ENST00000495293 PELP1Q8IZL8 1130 aaKnown RBP12.47□□□□□ -0.41
RBM39-240ENST00000495293 NUBP1P53384 320 aa12.46□□□□□ -0.41
RBM39-240ENST00000495293 PLEKHG5O94827 1062 aa12.44□□□□□ -0.42
RBM39-240ENST00000495293 KIF12Q96FN5 646 aa12.44□□□□□ -0.42
RBM39-240ENST00000495293 TRPC6Q9Y210 931 aa12.43□□□□□ -0.42
RBM39-240ENST00000495293 POTEMA6NI47 508 aa12.42□□□□□ -0.42
RBM39-240ENST00000495293 MAP3K13O43283 966 aa12.39□□□□□ -0.43
RBM39-240ENST00000495293 ASTLQ6HA08 431 aaPredicted RBP12.38□□□□□ -0.43
RBM39-240ENST00000495293 ATMINO43313 823 aaPredicted RBP12.37□□□□□ -0.43
RBM39-240ENST00000495293 POTEGQ6S5H5 508 aa12.37□□□□□ -0.43
RBM39-240ENST00000495293 FBXO3Q9UK99 471 aa12.33□□□□□ -0.44
RBM39-240ENST00000495293 VASPP50552 380 aaPredicted RBP12.31□□□□□ -0.44
RBM39-240ENST00000495293 ATN1P54259 1190 aaPredicted RBP12.31□□□□□ -0.44
RBM39-240ENST00000495293 ZBTB47Q9UFB7 747 aaPredicted RBP12.31□□□□□ -0.44
RBM39-240ENST00000495293 BMP2KQ9NSY1 1161 aaPredicted RBP12.3□□□□□ -0.44
RBM39-240ENST00000495293 POTEJP0CG39 1038 aa12.25□□□□□ -0.45
RBM39-240ENST00000495293 PCDH10Q9P2E7 1040 aa12.25□□□□□ -0.45
RBM39-240ENST00000495293 METRNQ9UJH8 293 aa12.25□□□□□ -0.45
RBM39-240ENST00000495293 FAM212AQ96EL1 285 aa12.24□□□□□ -0.45
RBM39-240ENST00000495293 POTEFA5A3E0 1075 aa12.23□□□□□ -0.45
RBM39-240ENST00000495293 IFNL1Q8IU54 200 aa12.22□□□□□ -0.45
RBM39-240ENST00000495293 PCDHB13Q9Y5F0 798 aa12.22□□□□□ -0.45
RBM39-240ENST00000495293 TIE1P35590 1138 aa12.21□□□□□ -0.45
RBM39-240ENST00000495293 TTLL13PA6NNM8 815 aa12.2□□□□□ -0.46
RBM39-240ENST00000495293 SLC39A7Q92504 469 aa12.2□□□□□ -0.46
RBM39-240ENST00000495293 C7P10643 843 aa12.17□□□□□ -0.46
RBM39-240ENST00000495293 PYGBP11216 843 aa12.17□□□□□ -0.46
RBM39-240ENST00000495293 DCAF8Q5TAQ9 597 aa12.17□□□□□ -0.46
RBM39-240ENST00000495293 IFNLR1Q8IU57 520 aaPredicted RBP12.17□□□□□ -0.46
RBM39-240ENST00000495293 SGIP1Q9BQI5 828 aa12.17□□□□□ -0.46
RBM39-240ENST00000495293 LCE2DQ5TA82 110 aaPredicted RBP12.15□□□□□ -0.46
RBM39-240ENST00000495293 KLHL34Q8N239 644 aa12.15□□□□□ -0.46
RBM39-240ENST00000495293 MAMSTRQ6ZN01 415 aa12.12□□□□□ -0.47
RBM39-240ENST00000495293 COLQQ9Y215 455 aaPredicted RBP12.12□□□□□ -0.47
RBM39-240ENST00000495293 TRIM35Q9UPQ4 493 aa12.11□□□□□ -0.47
RBM39-240ENST00000495293 PCDHB8Q9UN66 801 aa12.09□□□□□ -0.47
RBM39-240ENST00000495293 TMEM106CQ9BVX2 250 aa12.06□□□□□ -0.48
RBM39-240ENST00000495293 FAM163AQ96GL9 167 aaPredicted RBP12.05□□□□□ -0.48
RBM39-240ENST00000495293 SCUBE2Q9NQ36 999 aa12.03□□□□□ -0.48
RBM39-240ENST00000495293 GSE1Q14687 1217 aa12.01□□□□□ -0.49
RBM39-240ENST00000495293 SPOCK2Q92563 424 aa11.99□□□□□ -0.49
RBM39-240ENST00000495293 IER5LQ5T953 404 aa11.97□□□□□ -0.49
RBM39-240ENST00000495293 SEC24BO95487 1268 aa11.95□□□□□ -0.5
RBM39-240ENST00000495293 CHRM1P11229 460 aaPredicted RBP11.95□□□□□ -0.5
RBM39-240ENST00000495293 IRX5P78411 483 aaPredicted RBP11.95□□□□□ -0.5
RBM39-240ENST00000495293 CIZ1Q9ULV3 898 aaPredicted RBP11.92□□□□□ -0.5
RBM39-240ENST00000495293 ZNF467Q7Z7K2 595 aaPredicted RBP11.89□□□□□ -0.51
RBM39-240ENST00000495293 PLCG2P16885 1265 aa11.85□□□□□ -0.51
RBM39-240ENST00000495293 PSEN1P49768 467 aa11.85□□□□□ -0.51
RBM39-240ENST00000495293 CDAN1Q8IWY9 1227 aa11.84□□□□□ -0.51
RBM39-240ENST00000495293 PDCD7Q8N8D1 485 aaKnown RBP11.83□□□□□ -0.52
RBM39-240ENST00000495293 OCEL1Q9H607 264 aa11.82□□□□□ -0.52
RBM39-240ENST00000495293 PDAP1Q13442 181 aaKnown RBP11.78□□□□□ -0.52
RBM39-240ENST00000495293 RNF25Q96BH1 459 aaPredicted RBP11.78□□□□□ -0.52
RBM39-240ENST00000495293 ILDR1Q86SU0 546 aaPredicted RBP11.74□□□□□ -0.53
RBM39-240ENST00000495293 SLAIN1Q8ND83 568 aa11.73□□□□□ -0.53
RBM39-240ENST00000495293 CABP2Q9NPB3 220 aa11.73□□□□□ -0.53
RBM39-240ENST00000495293 MKRN3Q13064 507 aaKnown RBP11.72□□□□□ -0.53
RBM39-240ENST00000495293 ST18O60284 1047 aa11.7□□□□□ -0.54
RBM39-240ENST00000495293 DPY19L2Q6NUT2 758 aa11.7□□□□□ -0.54
RBM39-240ENST00000495293 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.7□□□□□ -0.544e-38■■■□□ 18.9
RBM39-240ENST00000495293 GOLGA2Q08379 1002 aa11.69□□□□□ -0.54
RBM39-240ENST00000495293 TRIM41Q8WV44 630 aa11.66□□□□□ -0.54
RBM39-240ENST00000495293 EFCAB3Q8N7B9 438 aa11.63□□□□□ -0.55
RBM39-240ENST00000495293 RIOK3O14730 519 aaKnown RBP11.61□□□□□ -0.55
RBM39-240ENST00000495293 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.6□□□□□ -0.55
RBM39-240ENST00000495293 MMRN1Q13201 1228 aa11.6□□□□□ -0.55
RBM39-240ENST00000495293 ZFP91Q96JP5 570 aaPredicted RBP11.6□□□□□ -0.55
RBM39-240ENST00000495293 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.6□□□□□ -0.55
RBM39-240ENST00000495293 SPNS2Q8IVW8 549 aa11.58□□□□□ -0.56
RBM39-240ENST00000495293 L3MBTL3Q96JM7 780 aaPredicted RBP11.56□□□□□ -0.56
RBM39-240ENST00000495293 PKD2Q13563 968 aa11.55□□□□□ -0.56
RBM39-240ENST00000495293 C3orf67Q6ZVT6 689 aa11.55□□□□□ -0.56
RBM39-240ENST00000495293 VGFO15240 615 aaPredicted RBP11.53□□□□□ -0.56
RBM39-240ENST00000495293 MS4A4AQ96JQ5 239 aa11.53□□□□□ -0.56
RBM39-240ENST00000495293 TMEM121BQ9BXQ6 578 aaPredicted RBP11.53□□□□□ -0.56
RBM39-240ENST00000495293 BOLA1Q9Y3E2 137 aa11.52□□□□□ -0.57
RBM39-240ENST00000495293 PHF8Q9UPP1 1060 aa11.49□□□□□ -0.57
RBM39-240ENST00000495293 RGL2O15211 777 aa11.48□□□□□ -0.57
RBM39-240ENST00000495293 ECM2O94769 699 aaPredicted RBP11.47□□□□□ -0.57
RBM39-240ENST00000495293 MARVELD3Q96A59 401 aa11.46□□□□□ -0.57
RBM39-240ENST00000495293 TMEM92Q6UXU6 159 aa11.45□□□□□ -0.58
RBM39-240ENST00000495293 BCL11BQ9C0K0 894 aaPredicted RBP11.45□□□□□ -0.58
RBM39-240ENST00000495293 SNPHO15079 494 aa11.43□□□□□ -0.58
RBM39-240ENST00000495293 SOX12O15370 315 aa11.43□□□□□ -0.58
RBM39-240ENST00000495293 MICALL2Q8IY33 904 aa11.43□□□□□ -0.58
RBM39-240ENST00000495293 HOXB3P14651 431 aaPredicted RBP11.42□□□□□ -0.58
RBM39-240ENST00000495293 FBXO22Q8NEZ5 403 aa11.42□□□□□ -0.58
RBM39-240ENST00000495293 MFRPQ9BY79 579 aa11.4□□□□□ -0.58
RBM39-240ENST00000495293 STK24Q9Y6E0 443 aa11.4□□□□□ -0.58
RBM39-240ENST00000495293 POTEB3A0JP26 581 aa11.38□□□□□ -0.59
RBM39-240ENST00000495293 POTEBQ6S5H4 581 aa11.38□□□□□ -0.59
RBM39-240ENST00000495293 G3V3G9 751 aa11.37□□□□□ -0.59
RBM39-240ENST00000495293 STK25O00506 426 aa11.37□□□□□ -0.59
RBM39-240ENST00000495293 NLRP6P59044 892 aa11.31□□□□□ -0.6
RBM39-240ENST00000495293 KRTAP3-3Q9BYR6 98 aa11.3□□□□□ -0.6
RBM39-240ENST00000495293 KRTAP3-2Q9BYR7 98 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms