RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 RASEFQ8IZ41 740 aa14.38□□□□□ -0.11
RPGR-210ENST00000494841 CIZ1Q9ULV3 898 aaPredicted RBP14.33□□□□□ -0.12
RPGR-210ENST00000494841 FAM212AQ96EL1 285 aa14.31□□□□□ -0.12
RPGR-210ENST00000494841 GSE1Q14687 1217 aa14.29□□□□□ -0.12
RPGR-210ENST00000494841 DCAF8Q5TAQ9 597 aa14.28□□□□□ -0.12
RPGR-210ENST00000494841 UNC13AQ9UPW8 1703 aa14.28□□□□□ -0.12
RPGR-210ENST00000494841 SCRIBQ14160 1630 aa14.26□□□□□ -0.13
RPGR-210ENST00000494841 ECM2O94769 699 aaPredicted RBP14.24□□□□□ -0.13
RPGR-210ENST00000494841 TSPYL2Q9H2G4 693 aaPredicted RBP14.22□□□□□ -0.13
RPGR-210ENST00000494841 TRIM41Q8WV44 630 aa14.2□□□□□ -0.14
RPGR-210ENST00000494841 SHROOM4Q9ULL8 1493 aa14.17□□□□□ -0.14
RPGR-210ENST00000494841 CD44P16070 742 aaKnown RBP14.16□□□□□ -0.14
RPGR-210ENST00000494841 C19orf67A6NJJ6 358 aa14.15□□□□□ -0.14
RPGR-210ENST00000494841 CCDC61Q9Y6R9 512 aa14.14□□□□□ -0.15
RPGR-210ENST00000494841 BICRAQ9NZM4 1560 aa14.13□□□□□ -0.15
RPGR-210ENST00000494841 RGL2O15211 777 aa14.13□□□□□ -0.15
RPGR-210ENST00000494841 PAK3O75914 559 aaPredicted RBP14.13□□□□□ -0.15
RPGR-210ENST00000494841 PYGBP11216 843 aa14.11□□□□□ -0.15
RPGR-210ENST00000494841 CHRM1P11229 460 aaPredicted RBP14.11□□□□□ -0.15
RPGR-210ENST00000494841 POTEHQ6S545 545 aa14.1□□□□□ -0.15
RPGR-210ENST00000494841 ZRANB1Q9UGI0 708 aa14.09□□□□□ -0.15
RPGR-210ENST00000494841 RNF25Q96BH1 459 aaPredicted RBP14.08□□□□□ -0.16
RPGR-210ENST00000494841 HAX1O00165 279 aa14.02□□□□□ -0.17
RPGR-210ENST00000494841 PHF12Q96QT6 1004 aa14.01□□□□□ -0.17
RPGR-210ENST00000494841 ZNF579Q8NAF0 562 aaKnown RBP14□□□□□ -0.17
RPGR-210ENST00000494841 RIOK3O14730 519 aaKnown RBP13.99□□□□□ -0.17
RPGR-210ENST00000494841 KIF12Q96FN5 646 aa13.99□□□□□ -0.17
RPGR-210ENST00000494841 EVX2Q03828 476 aa13.98□□□□□ -0.17
RPGR-210ENST00000494841 MAP3K13O43283 966 aa13.95□□□□□ -0.18
RPGR-210ENST00000494841 ZNF467Q7Z7K2 595 aaPredicted RBP13.91□□□□□ -0.18
RPGR-210ENST00000494841 SGIP1Q9BQI5 828 aa13.91□□□□□ -0.18
RPGR-210ENST00000494841 PCDHB8Q9UN66 801 aa13.91□□□□□ -0.18
RPGR-210ENST00000494841 PCDHB13Q9Y5F0 798 aa13.91□□□□□ -0.18
RPGR-210ENST00000494841 VGFO15240 615 aaPredicted RBP13.89□□□□□ -0.19
RPGR-210ENST00000494841 IFNL1Q8IU54 200 aa13.89□□□□□ -0.19
RPGR-210ENST00000494841 TAOK2Q9UL54 1235 aa13.86□□□□□ -0.19
RPGR-210ENST00000494841 MS4A3Q96HJ5 214 aa13.84□□□□□ -0.19
RPGR-210ENST00000494841 CHGAP10645 457 aaKnown RBP13.83□□□□□ -0.2
RPGR-210ENST00000494841 HS6ST3Q8IZP7 471 aa13.83□□□□□ -0.2
RPGR-210ENST00000494841 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.82□□□□□ -0.2
RPGR-210ENST00000494841 PDAP1Q13442 181 aaKnown RBP13.82□□□□□ -0.2
RPGR-210ENST00000494841 ZFP91Q96JP5 570 aaPredicted RBP13.82□□□□□ -0.2
RPGR-210ENST00000494841 PSEN1P49768 467 aa13.78□□□□□ -0.2
RPGR-210ENST00000494841 STK25O00506 426 aa13.77□□□□□ -0.21
RPGR-210ENST00000494841 CECR2Q9BXF3 1484 aa13.76□□□□□ -0.21
RPGR-210ENST00000494841 GALR2O43603 387 aaPredicted RBP13.76□□□□□ -0.21
RPGR-210ENST00000494841 BCL11BQ9C0K0 894 aaPredicted RBP13.76□□□□□ -0.21
RPGR-210ENST00000494841 TRPC6Q9Y210 931 aa13.76□□□□□ -0.21
RPGR-210ENST00000494841 CLCN6P51797 869 aa13.75□□□□□ -0.21
RPGR-210ENST00000494841 BBXQ8WY36 941 aaPredicted RBP13.73□□□□□ -0.21
RPGR-210ENST00000494841 EIF4G1Q04637 1599 aaKnown RBP13.73□□□□□ -0.21
RPGR-210ENST00000494841 STK24Q9Y6E0 443 aa13.72□□□□□ -0.21
RPGR-210ENST00000494841 DNAJC5Q9H3Z4 198 aa13.71□□□□□ -0.21
RPGR-210ENST00000494841 GABBR2O75899 941 aa13.69□□□□□ -0.22
RPGR-210ENST00000494841 TMEM106CQ9BVX2 250 aa13.66□□□□□ -0.22
RPGR-210ENST00000494841 TIE1P35590 1138 aa13.65□□□□□ -0.22
RPGR-210ENST00000494841 NKX1-1Q15270 411 aaPredicted RBP13.65□□□□□ -0.22
RPGR-210ENST00000494841 SP7Q8TDD2 431 aaPredicted RBP13.65□□□□□ -0.22
RPGR-210ENST00000494841 CC2D2AQ9P2K1 1620 aa13.64□□□□□ -0.23
RPGR-210ENST00000494841 BMP2KQ9NSY1 1161 aaPredicted RBP13.64□□□□□ -0.23
RPGR-210ENST00000494841 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.63□□□□□ -0.23
RPGR-210ENST00000494841 SMARCA4P51532 1647 aa13.63□□□□□ -0.23
RPGR-210ENST00000494841 MROH2BQ7Z745 1585 aa13.62□□□□□ -0.23
RPGR-210ENST00000494841 TTLL13PA6NNM8 815 aa13.62□□□□□ -0.23
RPGR-210ENST00000494841 BAZ1AQ9NRL2 1556 aaPredicted RBP13.62□□□□□ -0.23
RPGR-210ENST00000494841 PLCB2Q00722 1185 aa13.6□□□□□ -0.23
RPGR-210ENST00000494841 CABP2Q9NPB3 220 aa13.6□□□□□ -0.23
RPGR-210ENST00000494841 EFCAB3Q8N7B9 438 aa13.55□□□□□ -0.24
RPGR-210ENST00000494841 ATMINO43313 823 aaPredicted RBP13.54□□□□□ -0.24
RPGR-210ENST00000494841 ASTLQ6HA08 431 aaPredicted RBP13.54□□□□□ -0.24
RPGR-210ENST00000494841 PAXIP1Q6ZW49 1069 aaPredicted RBP13.54□□□□□ -0.24
RPGR-210ENST00000494841 RSF1Q96T23 1441 aaPredicted RBP13.53□□□□□ -0.24
RPGR-210ENST00000494841 ATN1P54259 1190 aaPredicted RBP13.52□□□□□ -0.25
RPGR-210ENST00000494841 SPRYD3Q8NCJ5 442 aa13.52□□□□□ -0.25
RPGR-210ENST00000494841 TRIM35Q9UPQ4 493 aa13.52□□□□□ -0.25
RPGR-210ENST00000494841 ATAD2BQ9ULI0 1458 aa13.51□□□□□ -0.25
RPGR-210ENST00000494841 GTPBP6O43824 516 aaPredicted RBP13.51□□□□□ -0.25
RPGR-210ENST00000494841 CFAP44Q96MT7 982 aa13.51□□□□□ -0.25
RPGR-210ENST00000494841 WIZO95785 1651 aa13.5□□□□□ -0.25
RPGR-210ENST00000494841 MFRPQ9BY79 579 aa13.5□□□□□ -0.25
RPGR-210ENST00000494841 GOLGA2Q08379 1002 aa13.49□□□□□ -0.25
RPGR-210ENST00000494841 DCBLD2Q96PD2 775 aa13.48□□□□□ -0.25
RPGR-210ENST00000494841 SOX12O15370 315 aa13.47□□□□□ -0.25
RPGR-210ENST00000494841 SMARCA2P51531 1590 aa13.46□□□□□ -0.25
RPGR-210ENST00000494841 PHF8Q9UPP1 1060 aa13.46□□□□□ -0.25
RPGR-210ENST00000494841 NCAPD3P42695 1498 aa13.45□□□□□ -0.26
RPGR-210ENST00000494841 POTEIP0CG38 1075 aa13.45□□□□□ -0.26
RPGR-210ENST00000494841 MKRN3Q13064 507 aaKnown RBP13.45□□□□□ -0.26
RPGR-210ENST00000494841 FBXO22Q8NEZ5 403 aa13.45□□□□□ -0.26
RPGR-210ENST00000494841 PEG3Q9GZU2 1588 aa13.45□□□□□ -0.26
RPGR-210ENST00000494841 SUPT5HO00267 1087 aaKnown RBP13.44□□□□□ -0.26
RPGR-210ENST00000494841 SLC24A1O60721 1099 aa13.44□□□□□ -0.26
RPGR-210ENST00000494841 RYDENQ9NUL5 291 aaKnown RBP13.44□□□□□ -0.26
RPGR-210ENST00000494841 PELP1Q8IZL8 1130 aaKnown RBP13.43□□□□□ -0.26
RPGR-210ENST00000494841 NLRP6P59044 892 aa13.42□□□□□ -0.26
RPGR-210ENST00000494841 BAZ1BQ9UIG0 1483 aaKnown RBP13.41□□□□□ -0.26
RPGR-210ENST00000494841 ILDR1Q86SU0 546 aaPredicted RBP13.4□□□□□ -0.26
RPGR-210ENST00000494841 MS4A4AQ96JQ5 239 aa13.39□□□□□ -0.27
RPGR-210ENST00000494841 IER5LQ5T953 404 aa13.38□□□□□ -0.27
RPGR-210ENST00000494841 HAP1P54257 671 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms